prot_Ecto-sp9_F_contig8823.17004.1 (polypeptide) Ectocarpus species9 EcSCA_722f female

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp9_F_contig8823.17004.1
Unique Nameprot_Ecto-sp9_F_contig8823.17004.1
Typepolypeptide
OrganismEctocarpus species9 EcSCA_722f female (Ectocarpus species9 EcSCA_722f female)
Sequence length39
Homology
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BLAST of mRNA_Ecto-sp9_F_contig8823.17004.1 vs.
Match: GCP_C_terminal (domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L542_9PHAE)

HSP 1 Score: 77.0 bits (188), Expect = 3.270e-16
Identity = 37/38 (97.37%), Postives = 37/38 (97.37%), Query Frame = 0 
Query:    1 MVRSRSAVYVNELLTELEFNHFFERQETWRVERRAPHV 38
            MVRSRSAVYVNELLTELEFNHFFERQETWRVERRAP V
Sbjct:  185 MVRSRSAVYVNELLTELEFNHFFERQETWRVERRAPRV 222
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BLAST of mRNA_Ecto-sp9_F_contig8823.17004.1 vs.
Match: Uncharacterized (protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FNI5_ECTSI)

HSP 1 Score: 77.0 bits (188), Expect = 1.950e-15
Identity = 37/38 (97.37%), Postives = 37/38 (97.37%), Query Frame = 0 
Query:    1 MVRSRSAVYVNELLTELEFNHFFERQETWRVERRAPHV 38
            MVRSRSAVYVNELLTELEFNHFFERQETWRVERRAP V
Sbjct: 1479 MVRSRSAVYVNELLTELEFNHFFERQETWRVERRAPRV 1516
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp9_F_contig8823.17004.1 vs.
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Ectocarpus species9 EcSCA_722f female vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
GCP_C_terminal3.270e-1697.37domain-containing protein n=1 Tax=Ectocarpus sp. C... [more]
Uncharacterized1.950e-1597.37protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 ... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp9_F_contig8823contigEcto-sp9_F_contig8823:1280..1396 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Ectocarpus species9 EcSCA_722f female2022-09-29
Diamond blastp: OGS1.0 of Ectocarpus species9 EcSCA_722f female vs UniRef902022-09-16
OGS1.0 of Ectocarpus species9 EcSCA_722f female2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp9_F_contig8823.17004.1mRNA_Ecto-sp9_F_contig8823.17004.1Ectocarpus species9 EcSCA_722f femalemRNAEcto-sp9_F_contig8823 762..1717 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp9_F_contig8823.17004.1 ID=prot_Ecto-sp9_F_contig8823.17004.1|Name=mRNA_Ecto-sp9_F_contig8823.17004.1|organism=Ectocarpus species9 EcSCA_722f female|type=polypeptide|length=39bp
MVRSRSAVYVNELLTELEFNHFFERQETWRVERRAPHV*
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