prot_Ecto-sp9_F_contig8802.16991.1 (polypeptide) Ectocarpus species9 EcSCA_722f female

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp9_F_contig8802.16991.1
Unique Nameprot_Ecto-sp9_F_contig8802.16991.1
Typepolypeptide
OrganismEctocarpus species9 EcSCA_722f female (Ectocarpus species9 EcSCA_722f female)
Sequence length179
Homology
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BLAST of mRNA_Ecto-sp9_F_contig8802.16991.1 vs.
Match: Uncharacterized (protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FK58_ECTSI)

HSP 1 Score: 103 bits (257), Expect = 2.060e-22
Identity = 92/108 (85.19%), Postives = 93/108 (86.11%), Query Frame = 0 
Query:   70 EVNHGDATATAVTRPDGSNAVXXXXXXXXXVLSSAEASAXXXXXHAGGGVPEPXXXXXXXXXXXXXXXVAVAQAVGPAAPSVVDVGGVEGEGGQARQKEAPGTAEVGG 177
            EV+HGDATATAVTRPDGSN  XXXXXXXXX      A  XXXXXHAGGGVPEPXXXXXXXXXXXXXXXVAVAQ VGPAAPSVVDVGGVEGEGGQA QKEAP TA  GG
Sbjct:  791 EVSHGDATATAVTRPDGSN-XXXXXXXXXXXXXXXXAXXXXXXXHAGGGVPEPXXXXXXXXXXXXXXXVAVAQGVGPAAPSVVDVGGVEGEGGQAGQKEAPATAADGG 897
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BLAST of mRNA_Ecto-sp9_F_contig8802.16991.1 vs.
Match: Histone (acetyltransferase n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L4V8_9PHAE)

HSP 1 Score: 98.6 bits (244), Expect = 1.250e-20
Identity = 66/110 (60.00%), Postives = 67/110 (60.91%), Query Frame = 0 
Query:   70 EVNHGDATATAVTRPDGSNAVXXXXXXXXX--VLSSAEASAXXXXXHAGGGVPEPXXXXXXXXXXXXXXXVAVAQAVGPAAPSVVDVGGVEGEGGQARQKEAPGTAEVGG 177
            EVNHGDATATAVTRPDGSNAV           VLSSAEASA     HA GG PEP               VAVAQAV  AAP V DV GVEG+ GQARQKEAP T   GG
Sbjct: 2647 EVNHGDATATAVTRPDGSNAVAAAAPAGGRSRVLSSAEASATTAAAHAVGGEPEPGGRAEETG-------VAVAQAVALAAPPVGDVRGVEGQEGQARQKEAPATTADGG 2749
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp9_F_contig8802.16991.1 vs.
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Ectocarpus species9 EcSCA_722f female vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
Uncharacterized2.060e-2285.19protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 ... [more]
Histone1.250e-2060.00acetyltransferase n=1 Tax=Ectocarpus sp. CCAP 1310... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0 of Ectocarpus species9 EcSCA_722f female
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_N_REGIONSignal peptide N-regioncoord: 1..2
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 20..178
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_H_REGIONSignal peptide H-regioncoord: 3..14
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDESignal Peptidecoord: 1..19
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_C_REGIONSignal peptide C-regioncoord: 15..19

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp9_F_contig8802contigEcto-sp9_F_contig8802:4449..4985 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Ectocarpus species9 EcSCA_722f female2022-09-29
Diamond blastp: OGS1.0 of Ectocarpus species9 EcSCA_722f female vs UniRef902022-09-16
OGS1.0 of Ectocarpus species9 EcSCA_722f female2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp9_F_contig8802.16991.1mRNA_Ecto-sp9_F_contig8802.16991.1Ectocarpus species9 EcSCA_722f femalemRNAEcto-sp9_F_contig8802 4449..5281 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp9_F_contig8802.16991.1 ID=prot_Ecto-sp9_F_contig8802.16991.1|Name=mRNA_Ecto-sp9_F_contig8802.16991.1|organism=Ectocarpus species9 EcSCA_722f female|type=polypeptide|length=179bp
TAAVGGAIAATTTTTPAAAAVVTPAAAPSVLPADDGGDEAGLNHLLSPPP
PPPPTRGLRAVAGGGGGGGEVNHGDATATAVTRPDGSNAVAAAAGGSSRV
LSSAEASAATAAAHAGGGVPEPGGGVPEPGGRVEETGVAVAQAVGPAAPS
VVDVGGVEGEGGQARQKEAPGTAEVGGL*
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