prot_Ecto-sp9_F_contig8774.16950.1 (polypeptide) Ectocarpus species9 EcSCA_722f female

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp9_F_contig8774.16950.1
Unique Nameprot_Ecto-sp9_F_contig8774.16950.1
Typepolypeptide
OrganismEctocarpus species9 EcSCA_722f female (Ectocarpus species9 EcSCA_722f female)
Sequence length122
Homology
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BLAST of mRNA_Ecto-sp9_F_contig8774.16950.1 vs.
Match: SET (and MYND domain containing 3 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FUR7_ECTSI)

HSP 1 Score: 175 bits (443), Expect = 2.990e-49
Identity = 118/121 (97.52%), Postives = 118/121 (97.52%), Query Frame = 0 
Query:    1 LPTGAIDRGTCVGEEGGDGIRGGRGSDXXXXXXXXXXXXXXXXXXXXXXXSFTTAVVSSECPLLATAIWEAILVEVLDRVLPLAGRHCETELHRARVAFAERVVGVLGLRRRSLVTLPGES 121
            L  GAIDRGTCVGEEGGDGIRGGRGSDXXXXXXXXXXXXXXXXXXXXXXXSFTTAVVSSECPLLATAIWEAILVEVLDRVLPLAGRHCETELHRARVAFAERVVGVLGLRR SLVTLPGES
Sbjct:  516 LSAGAIDRGTCVGEEGGDGIRGGRGSDXXXXXXXXXXXXXXXXXXXXXXXSFTTAVVSSECPLLATAIWEAILVEVLDRVLPLAGRHCETELHRARVAFAERVVGVLGLRRSSLVTLPGES 636
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BLAST of mRNA_Ecto-sp9_F_contig8774.16950.1 vs.
Match: Uncharacterized (protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KQZ9_9PHAE)

HSP 1 Score: 128 bits (321), Expect = 7.980e-36
Identity = 67/73 (91.78%), Postives = 68/73 (93.15%), Query Frame = 0 
Query:   51 SFTTAVVSSECPLLATAIWEAILVEVLDRVLPLAGRHCETEL--HRARVAFAERVVGVLGLRRRSLVTLPGES 121
            SFTTA+VSSECPLLAT IWEAILVEVLDRVLPLAGRHCETE   HRARVAFAERVVGVLGLRR SLVTLPGES
Sbjct:   54 SFTTAMVSSECPLLATGIWEAILVEVLDRVLPLAGRHCETETEAHRARVAFAERVVGVLGLRRSSLVTLPGES 126
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp9_F_contig8774.16950.1 vs.
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Ectocarpus species9 EcSCA_722f female vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
SET2.990e-4997.52and MYND domain containing 3 n=1 Tax=Ectocarpus si... [more]
Uncharacterized7.980e-3691.78protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp9_F_contig8774contigEcto-sp9_F_contig8774:814..1593 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Ectocarpus species9 EcSCA_722f female2022-09-29
Diamond blastp: OGS1.0 of Ectocarpus species9 EcSCA_722f female vs UniRef902022-09-16
OGS1.0 of Ectocarpus species9 EcSCA_722f female2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp9_F_contig8774.16950.1mRNA_Ecto-sp9_F_contig8774.16950.1Ectocarpus species9 EcSCA_722f femalemRNAEcto-sp9_F_contig8774 433..1593 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp9_F_contig8774.16950.1 ID=prot_Ecto-sp9_F_contig8774.16950.1|Name=mRNA_Ecto-sp9_F_contig8774.16950.1|organism=Ectocarpus species9 EcSCA_722f female|type=polypeptide|length=122bp
LPTGAIDRGTCVGEEGGDGIRGGRGSDDNRGGGGRVSKRRRGGGDERDGG
SFTTAVVSSECPLLATAIWEAILVEVLDRVLPLAGRHCETELHRARVAFA
ERVVGVLGLRRRSLVTLPGES*
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