prot_Ecto-sp9_F_contig8752.16934.1 (polypeptide) Ectocarpus species9 EcSCA_722f female

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp9_F_contig8752.16934.1
Unique Nameprot_Ecto-sp9_F_contig8752.16934.1
Typepolypeptide
OrganismEctocarpus species9 EcSCA_722f female (Ectocarpus species9 EcSCA_722f female)
Sequence length300
Homology
BLAST of mRNA_Ecto-sp9_F_contig8752.16934.1 vs.
Match: EsV-1-5 (n=1 Tax=Ectocarpus siliculosus virus 1 (isolate New Zealand/Kaikoura/1988) TaxID=654926 RepID=Q8QNQ4_ESV1K)

HSP 1 Score: 380 bits (977), Expect = 5.370e-130
Identity = 200/301 (66.45%), Postives = 228/301 (75.75%), Query Frame = 0
Query:    1 MLTKNIWSQIGVNPADALLPPVHNLGMIILREELTEAESDLHAARVALKTLEEAGASGDTRDLYTAMWKLQKKEQAYFARRYLQTNKAVLRGWHNQVSKYKSSGE-KVGHGVQGVVYGVINHPDKVVKLYATRHQLAHNSITTKQFVYDKTASDNGFGPKIYEISSDDRVVDLSDKSTVPKYRYKRKFSVVMERLADI----DMDKQYVGIVNLWKKMRQHGLFSGDGFYGYSLQHKAIVHADFGAVWKTKDDDEFKDAVYEHLEERKDSGGLDPDIARRYRDEFPGDPFTKEILVPVLAK 296
            MLTKNIWSQIG+NPA+ LLPPVHN+GMIILREELT+AE+DLHAARVALKTLEEAGASGDT DLYTAMWKLQKKEQAYFARRYLQTNKAVLRGWHNQVSKYK   E  VGHGVQG+VY VINHPDKVVK Y+ R       +TTKQFVYD+ A + GFGP+IYEISSD RV+DLSDKST+PK+      SVVME++  +    ++ K   GIV +WKKMRQ GL + DGFY +SL+ KAIV  DFG V +  +D  F D +YE  +     G  DP IA +Y  E P D FTK IL P L K
Sbjct:    1 MLTKNIWSQIGINPANTLLPPVHNVGMIILREELTDAENDLHAARVALKTLEEAGASGDTSDLYTAMWKLQKKEQAYFARRYLQTNKAVLRGWHNQVSKYKFRKEASVGHGVQGIVYHVINHPDKVVKRYSVRRPGTLAFLTTKQFVYDRIACEQGFGPQIYEISSDGRVIDLSDKSTIPKFEKGLIISVVMEKIEKMTDQEELLKNSGGIVGVWKKMRQGGLLNVDGFYAHSLKQKAIVAGDFGVVEEATNDQMFIDKMYEFFDSCLSIGANDPGIALKYEKEHPEDSFTKLILKPALDK 301          
BLAST of mRNA_Ecto-sp9_F_contig8752.16934.1 vs.
Match: EsV-1-3 (n=1 Tax=Ectocarpus siliculosus virus 1 (isolate New Zealand/Kaikoura/1988) TaxID=654926 RepID=Q8QNQ6_ESV1K)

HSP 1 Score: 94.7 bits (234), Expect = 2.120e-19
Identity = 54/92 (58.70%), Postives = 63/92 (68.48%), Query Frame = 0
Query:    3 TKNIWSQIGVNPADALLPPVHNLGMIILREELTEAESDLHAARVALKTLEEAGASGDTRDLYTAMWKLQKKEQAYFARRYLQTNKA-VLRGW 93
            T  I + IG+NP+  LLPPVHNL MI L+E LT+AE DLHAARVALK LE A    + + LY AM KLQ KE  YFA RY+   K  +LRGW
Sbjct:   25 TPMIKAGIGLNPSKPLLPPVHNLRMIYLKEPLTDAEKDLHAARVALKLLETADNDVNRKALYKAMAKLQGKEAQYFATRYIGRGKPQILRGW 116          
BLAST of mRNA_Ecto-sp9_F_contig8752.16934.1 vs.
Match: EsV-1-4 (n=1 Tax=Ectocarpus siliculosus virus 1 (isolate New Zealand/Kaikoura/1988) TaxID=654926 RepID=Q8QNQ5_ESV1K)

HSP 1 Score: 87.8 bits (216), Expect = 1.600e-16
Identity = 48/92 (52.17%), Postives = 62/92 (67.39%), Query Frame = 0
Query:   10 IGVNPADALLPPVHNLGMIILREELTEAESDLHAARVALKTLEEAGASGDTRDLYTAMWKLQKKEQAYFARRYLQTNKAVLRGWHNQVSKYK 101
            IG+NP+  LLPPVHNL MI L+E   +AE  LH ARVALK+++  G    T  LY AM KL+  E+ YFARRY   +KA+L+GW+ +  K K
Sbjct:   56 IGLNPSKPLLPPVHNLRMIYLKEPFGDAEIHLHDARVALKSVQNGGP---TAPLYAAMAKLEVAERDYFARRYFDGDKAILKGWNAEKFKQK 144          
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp9_F_contig8752.16934.1 vs.
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Ectocarpus species9 EcSCA_722f female vs UniRef90)
Total hits: 3
Match NameE-valueIdentityDescription
EsV-1-55.370e-13066.45n=1 Tax=Ectocarpus siliculosus virus 1 (isolate Ne... [more]
EsV-1-32.120e-1958.70n=1 Tax=Ectocarpus siliculosus virus 1 (isolate Ne... [more]
EsV-1-41.600e-1652.17n=1 Tax=Ectocarpus siliculosus virus 1 (isolate Ne... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0 of Ectocarpus species9 EcSCA_722f female
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 299..299
NoneNo IPR availableCOILSCoilCoilcoord: 34..54

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp9_F_contig8752contigEcto-sp9_F_contig8752:3347..4246 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Ectocarpus species9 EcSCA_722f female2022-09-29
Diamond blastp: OGS1.0 of Ectocarpus species9 EcSCA_722f female vs UniRef902022-09-16
OGS1.0 of Ectocarpus species9 EcSCA_722f female2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp9_F_contig8752.16934.1mRNA_Ecto-sp9_F_contig8752.16934.1Ectocarpus species9 EcSCA_722f femalemRNAEcto-sp9_F_contig8752 3347..4246 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp9_F_contig8752.16934.1 ID=prot_Ecto-sp9_F_contig8752.16934.1|Name=mRNA_Ecto-sp9_F_contig8752.16934.1|organism=Ectocarpus species9 EcSCA_722f female|type=polypeptide|length=300bp
MLTKNIWSQIGVNPADALLPPVHNLGMIILREELTEAESDLHAARVALKT
LEEAGASGDTRDLYTAMWKLQKKEQAYFARRYLQTNKAVLRGWHNQVSKY
KSSGEKVGHGVQGVVYGVINHPDKVVKLYATRHQLAHNSITTKQFVYDKT
ASDNGFGPKIYEISSDDRVVDLSDKSTVPKYRYKRKFSVVMERLADIDMD
KQYVGIVNLWKKMRQHGLFSGDGFYGYSLQHKAIVHADFGAVWKTKDDDE
FKDAVYEHLEERKDSGGLDPDIARRYRDEFPGDPFTKEILVPVLAKLGI*
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