prot_Ecto-sp9_F_contig8729.16913.1 (polypeptide) Ectocarpus species9 EcSCA_722f female

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp9_F_contig8729.16913.1
Unique Nameprot_Ecto-sp9_F_contig8729.16913.1
Typepolypeptide
OrganismEctocarpus species9 EcSCA_722f female (Ectocarpus species9 EcSCA_722f female)
Sequence length104
Homology
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BLAST of mRNA_Ecto-sp9_F_contig8729.16913.1 vs.
Match: 4a-hydroxytetrahydrobiopterin (dehydratase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G856_ECTSI)

HSP 1 Score: 67.4 bits (163), Expect = 4.320e-11
Identity = 44/80 (55.00%), Postives = 48/80 (60.00%), Query Frame = 0 
Query:   25 RDRCAVSVRRWRRNRLRYTKKRSNRFLGGAAAVCSCCGLSCYRNLAATKLSRAFSFCVEGDRGTRDTARRVSRPGRPRSW 104
            RD  A  VR WRRNR R TK        G   +C+  GL  YRNL AT  S AFSF VEGDRGT+ TARRV    RP+SW
Sbjct:   32 RDGGAECVRGWRRNRQRDTKN------FGGLLLCAAAGLF-YRNLTATNQSSAFSFRVEGDRGTKYTARRVWHLARPQSW 104
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp9_F_contig8729.16913.1 vs.
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Ectocarpus species9 EcSCA_722f female vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
4a-hydroxytetrahydrobiopterin4.320e-1155.00dehydratase n=1 Tax=Ectocarpus siliculosus TaxID=2... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp9_F_contig8729contigEcto-sp9_F_contig8729:2056..2367 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Ectocarpus species9 EcSCA_722f female2022-09-29
Diamond blastp: OGS1.0 of Ectocarpus species9 EcSCA_722f female vs UniRef902022-09-16
OGS1.0 of Ectocarpus species9 EcSCA_722f female2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp9_F_contig8729.16913.1mRNA_Ecto-sp9_F_contig8729.16913.1Ectocarpus species9 EcSCA_722f femalemRNAEcto-sp9_F_contig8729 2055..2367 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp9_F_contig8729.16913.1 ID=prot_Ecto-sp9_F_contig8729.16913.1|Name=mRNA_Ecto-sp9_F_contig8729.16913.1|organism=Ectocarpus species9 EcSCA_722f female|type=polypeptide|length=104bp
SLRLFREEGDRGTQDAARRVSRPSRDRCAVSVRRWRRNRLRYTKKRSNRF
LGGAAAVCSCCGLSCYRNLAATKLSRAFSFCVEGDRGTRDTARRVSRPGR
PRSW
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