mRNA_Ecto-sp9_F_contig11293.1111.1 (mRNA) Ectocarpus species9 EcSCA_722f female

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_Ecto-sp9_F_contig11293.1111.1
Unique NamemRNA_Ecto-sp9_F_contig11293.1111.1
TypemRNA
OrganismEctocarpus species9 EcSCA_722f female (Ectocarpus species9 EcSCA_722f female)
Homology
BLAST of mRNA_Ecto-sp9_F_contig11293.1111.1 vs.
Match: Pyruvate (carboxyltransferase domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JLQ2_9PHAE)

HSP 1 Score: 600 bits (1548), Expect = 3.720e-216
Identity = 301/325 (92.62%), Postives = 304/325 (93.54%), Query Frame = 1
Query:    1 NVVTEFVRLAAKNGIDVFRVFDCFNDVEQMRVCIEAVRKAGKVAEVCVCYTSDLQTSSIFTVDYYKGVAKSAAEAGAHMIGIKDMAGLLKPRSAPLLVEAIRSVTDLPIHFHTHATSSCSLATALEMARAGCDVIDFATASMADCTSQPSLNGFLASTEGSEMAPEGTGYLGLEPYDVYWSRVRDMYSPFENGMKSGTARVFDHQIPGKRGEIR--------GQYSNLMVQCKSMGIWDKWEGVLDMYRDVNNLFGDIVKVTPSSKCVGDLALYLVTRGLKASDVTDPAKKGQVDFPDSVVGLLEGRLGFPHKGFPDEVMGCYAC 951
            NVVTEFVRLAA+NGIDVFRVFDCFNDVEQMRVCIEAVRKAGKVAE          TS IFTVDYYKGVAKSAAEAGAHMIGIKDMAGLLKPRSAPLLVEAIRSVTDLPIHFHTHATSSCSLATALEMARAGCDVIDFATASMADCTSQPSLNGFLASTEGSEMAP+GTGYLGLEPYDVYWSRVRDMYSPFENGMKSGTARVFDHQIPGK GEI         GQYSNLMVQCKSMGIWDKWEGVLDMYRDVNNLFGDIVKVTPSSKCVGDLALYLVTRGLKASDVTDPAKKGQVDFPDSVVGLLEGRLGFPHKGFPDEV+GCYAC
Sbjct:   17 NVVTEFVRLAAQNGIDVFRVFDCFNDVEQMRVCIEAVRKAGKVAE----------TSPIFTVDYYKGVAKSAAEAGAHMIGIKDMAGLLKPRSAPLLVEAIRSVTDLPIHFHTHATSSCSLATALEMARAGCDVIDFATASMADCTSQPSLNGFLASTEGSEMAPDGTGYLGLEPYDVYWSRVRDMYSPFENGMKSGTARVFDHQIPGKIGEIHISCSRAKGGQYSNLMVQCKSMGIWDKWEGVLDMYRDVNNLFGDIVKVTPSSKCVGDLALYLVTRGLKASDVTDPAKKGQVDFPDSVVGLLEGRLGFPHKGFPDEVVGCYAC 331          
BLAST of mRNA_Ecto-sp9_F_contig11293.1111.1 vs.
Match: Acetyl-CoA (carboxytransferase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LM14_ECTSI)

HSP 1 Score: 609 bits (1571), Expect = 4.060e-207
Identity = 301/311 (96.78%), Postives = 303/311 (97.43%), Query Frame = 1
Query:    1 NVVTEFVRLAAKNGIDVFRVFDCFNDVEQMRVCIEAVRKAGKVAEVCVCYTSDLQTSSIFTVDYYKGVAKSAAEAGAHMIGIKDMAGLLKPRSAPLLVEAIRSVTDLPIHFHTHATSSCSLATALEMARAGCDVIDFATASMADCTSQPSLNGFLASTEGSEMAPEGTGYLGLEPYDVYWSRVRDMYSPFENGMKSGTARVFDHQIPGKRGEIRGQYSNLMVQCKSMGIWDKWEGVLDMYRDVNNLFGDIVKVTPSSKCVGDLALYLVTRGLKASDVTDPAKKGQVDFPDSVVGLLEGRLGFPHKGFPDEV 933
            N+  +FVRLAAKNGIDVFRVFDCFNDVEQMRVCIEAVRKAGKVAEVCVCYTSDLQTSSIFTVDYYKGVAKSAAEAGAHMIGIKDMAGLLKPRSAPLLVEAIRSVTDLPIHFHTHATSSCSLATALEMARAGCDVIDFATASMADCTSQPSLNGFLASTEGSEMAPEGTGYLGLEPYDVYWSRVRDMYSPFENGMKSGTARVFDHQIPG      GQYSNLMVQCKSMGIWDKWEGVLDMYRDVNNLFGDIVKVTPSSKCVGDLALYLVTRGLKASDVTDPAKKGQVDFPDSVVGLLEGRLGFPHKGFPDEV
Sbjct:  698 NICLQFVRLAAKNGIDVFRVFDCFNDVEQMRVCIEAVRKAGKVAEVCVCYTSDLQTSSIFTVDYYKGVAKSAAEAGAHMIGIKDMAGLLKPRSAPLLVEAIRSVTDLPIHFHTHATSSCSLATALEMARAGCDVIDFATASMADCTSQPSLNGFLASTEGSEMAPEGTGYLGLEPYDVYWSRVRDMYSPFENGMKSGTARVFDHQIPG------GQYSNLMVQCKSMGIWDKWEGVLDMYRDVNNLFGDIVKVTPSSKCVGDLALYLVTRGLKASDVTDPAKKGQVDFPDSVVGLLEGRLGFPHKGFPDEV 1002          
BLAST of mRNA_Ecto-sp9_F_contig11293.1111.1 vs.
Match: Hypothetical (protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S4DC20_HETAK)

HSP 1 Score: 437 bits (1124), Expect = 7.490e-147
Identity = 212/308 (68.83%), Postives = 247/308 (80.19%), Query Frame = 1
Query:    1 NVVTEFVRLAAKNGIDVFRVFDCFNDVEQMRVCIEAVRKAGKVAEVCVCYTSDLQTSSIFTVDYYKGVAKSAAEAGAHMIGIKDMAGLLKPRSAPLLVEAIRSVTDLPIHFHTHATSSCSLATALEMARAGCDVIDFATASMADCTSQPSLNGFLASTEGSEMAPEGTGYLGLEPYDVYWSRVRDMYSPFENGMKSGTARVFDHQIPGKRGEIRGQYSNLMVQCKSMGIWDKWEGVLDMYRDVNNLFGDIVKVTPSSKCVGDLALYLVTRGLKASDVTDPAKKGQVDFPDSVVGLLEGRLGFPHKGFP 924
            NVV EF+RLAA+NG+DVFR+FDCFND++QMRV I+ VR+  K AEVC CYT D+ TS I+  DYYK VA++A  AGAH IGIKDMAGL KP +A  LVEAIRSVTDLPIHFHTHATS  SLATA+EMA+AG D++D A ASMAD TSQPS+N FLAS E    +P+   Y+ LEPYD+YW  VRDMY PFE+GM S TARV+DH+IPG      GQYSNL+VQCKSMG+WD+WE VLDMYRDVN LFG +VKVTPSSKCVGDLALYLVTR L  +DV DPAK  ++DFP S   L+EG+LG PH+GFP
Sbjct:  129 NVVKEFIRLAAQNGMDVFRIFDCFNDIDQMRVSIDTVREYNKFAEVCACYTEDITTSDIYNQDYYKNVAEAAVTAGAHAIGIKDMAGLCKPLAAKPLVEAIRSVTDLPIHFHTHATSGASLATAMEMAKAGADIVDVAAASMADGTSQPSMNAFLASMESHPRSPK-MDYMKLEPYDMYWGGVRDMYKPFESGMLSSTARVYDHEIPG------GQYSNLIVQCKSMGLWDRWEEVLDMYRDVNRLFGRVVKVTPSSKCVGDLALYLVTRNLTTADVLDPAKAAKIDFPASTKDLMEGKLGRPHRGFP 429          
BLAST of mRNA_Ecto-sp9_F_contig11293.1111.1 vs.
Match: Acetyl-CoA (carboxytransferase n=1 Tax=Aureococcus anophagefferens TaxID=44056 RepID=F0XWB2_AURAN)

HSP 1 Score: 449 bits (1154), Expect = 7.390e-145
Identity = 221/311 (71.06%), Postives = 255/311 (81.99%), Query Frame = 1
Query:    1 NVVTEFVRLAAKNGIDVFRVFDCFNDVEQMRVCIEAVRKAGKVAEVCVCYTSDLQTSSIFTVDYYKGVAKSAAEAGAHMIGIKDMAGLLKPRSAPLLVEAIRSVTDLPIHFHTHATSSCSLATALEMARAGCDVIDFATASMADCTSQPSLNGFLASTEGSEMAPEGTGYLGLEPYDVYWSRVRDMYSPFENGMKSGTARVFDHQIPGKRGEIRGQYSNLMVQCKSMGIWDKWEGVLDMYRDVNNLFGDIVKVTPSSKCVGDLALYLVTRGLKASDVTDPAKKGQVDFPDSVVGLLEGRLGFPHKGFPDEV 933
            NVVTEFVRLAA NG+DVFR+FDCFNDV QMR C++AVR AGKVAEVCVCYTSD   S ++ V YY GVA  AA AGAH+IGIKDMAGLLKP +A  L+ AIR V DLP+HFHTH TSS S+A ALEM RAGCDV+DFATA+MAD TSQPSLN F A+ EG E AP G  Y+ LEPYDVYW++VR MY+PFE GM +G+ARVFDH+IPG      GQY+NL VQC+SMG+ D+WE VLD YRDVN LFGD+VKVTPSSKCVGDLALYLVTR + A+DV D +K   +D+PDSVVGL+EGRLGFPH+GFP +V
Sbjct:  746 NVVTEFVRLAALNGMDVFRIFDCFNDVGQMRTCVDAVRAAGKVAEVCVCYTSDCLASDVYDVAYYAGVAAEAAAAGAHLIGIKDMAGLLKPAAAAPLLAAIRGVCDLPVHFHTHCTSSASVAVALEMTRAGCDVVDFATAAMADLTSQPSLNAFCAAMEGLERAP-GIDYMRLEPYDVYWAKVRAMYAPFETGMLAGSARVFDHEIPG------GQYANLFVQCQSMGLADRWEEVLDAYRDVNKLFGDVVKVTPSSKCVGDLALYLVTRKMTAADVLDGSKT--LDYPDSVVGLMEGRLGFPHRGFPADV 1047          
BLAST of mRNA_Ecto-sp9_F_contig11293.1111.1 vs.
Match: Acetyl-CoA (carboxytransferase n=2 Tax=Sar TaxID=2698737 RepID=A0A7S3Y4I5_HETAK)

HSP 1 Score: 445 bits (1144), Expect = 5.890e-143
Identity = 211/311 (67.85%), Postives = 254/311 (81.67%), Query Frame = 1
Query:    1 NVVTEFVRLAAKNGIDVFRVFDCFNDVEQMRVCIEAVRKAGKVAEVCVCYTSDLQTSSIFTVDYYKGVAKSAAEAGAHMIGIKDMAGLLKPRSAPLLVEAIRSVTDLPIHFHTHATSSCSLATALEMARAGCDVIDFATASMADCTSQPSLNGFLASTEGSEMAPEGTGYLGLEPYDVYWSRVRDMYSPFENGMKSGTARVFDHQIPGKRGEIRGQYSNLMVQCKSMGIWDKWEGVLDMYRDVNNLFGDIVKVTPSSKCVGDLALYLVTRGLKASDVTDPAKKGQVDFPDSVVGLLEGRLGFPHKGFPDEV 933
            NVV EF++LAA+NG+DVFR+FDCFND++QM+V I+ VR+ GKVAEVC+CYT D+ TS ++ V+YYK + + A +AGAH+IGIKDMAGL KP +A  LVEAIRSVTDLPIHFHTHATSS SLAT +EM++AGCD+IDF+ ASMAD T+QPSLN FLAS  G E  P    YL LEPYD YW+++R+MYSPFE+GM SGTARV+DH+IPG      GQYSNL  QCKSMG+WD+WE VLDMYRDVN LFG +VKVTPSSKCVGDLALYL+ RGL A DV  P    ++D+P SVV L+EG+LGFPH+GFP  V
Sbjct:  798 NVVREFIQLAAQNGMDVFRIFDCFNDIKQMQVSIDTVRECGKVAEVCLCYTEDINTSEVYNVEYYKKLTQQAVDAGAHIIGIKDMAGLCKPLAAKPLVEAIRSVTDLPIHFHTHATSSASLATCMEMSKAGCDIIDFSAASMADGTAQPSLNAFLASMAGDERDPM-IDYLTLEPYDQYWAKIREMYSPFESGMLSGTARVYDHEIPG------GQYSNLFAQCKSMGLWDRWEEVLDMYRDVNRLFGRVVKVTPSSKCVGDLALYLINRGLSAEDVLKPEIADKIDWPSSVVDLMEGKLGFPHRGFPSAV 1101          
BLAST of mRNA_Ecto-sp9_F_contig11293.1111.1 vs.
Match: Acetyl-coenzyme (A carboxylase carboxyl transferase subunits beta/alpha n=1 Tax=Aureoumbra lagunensis TaxID=44058 RepID=A0A7S3NKJ5_9STRA)

HSP 1 Score: 430 bits (1105), Expect = 8.090e-138
Identity = 206/313 (65.81%), Postives = 243/313 (77.64%), Query Frame = 1
Query:    1 NVVTEFVRLAAKNGIDVFRVFDCFNDVEQMRVCIEAVRKAGKVAEVCVCYTSDLQTSSIFTVDYYKGVAKSAAEAGAHMIGIKDMAGLLKPRSAPLLVEAIRSVT--DLPIHFHTHATSSCSLATALEMARAGCDVIDFATASMADCTSQPSLNGFLASTEGSEMAPEGTGYLGLEPYDVYWSRVRDMYSPFENGMKSGTARVFDHQIPGKRGEIRGQYSNLMVQCKSMGIWDKWEGVLDMYRDVNNLFGDIVKVTPSSKCVGDLALYLVTRGLKASDVTDPAKKGQVDFPDSVVGLLEGRLGFPHKGFPDEV 933
            NVV  FV LAAKNG+D+FR+FDCFND+ QM+ CI+AVRK GKVAE CVCYTSD+ TSS++  +YY  +AK   +AGAH I IKDMAGL+KP     ++ AIR+    D+PIHFHTH TSS SLA A+EM R GCD+IDFA ASMAD TSQPSLN F A+  G    P+   YL LEP DVYW +VR+MY+PFE GM SG+ARV+DH+IPG      GQY+NL VQCKSMG+ D+WE VLD YRDVN LFGDIVKVTPSSKCVGDLAL+L+ + LKA D+ DP K   +D+PDSVVGL EGRLGFPH+GFPDEV
Sbjct:  726 NVVVRFVELAAKNGMDIFRIFDCFNDLNQMKTCIDAVRKTGKVAECCVCYTSDITTSSVYNAEYYTNLAKELCDAGAHTIAIKDMAGLMKPSGVVPILNAIRAGAGDDIPIHFHTHCTSSASLAVAMEMTRQGCDIIDFAIASMADLTSQPSLNAFCAAMAGMPRDPK-INYLALEPLDVYWMKVREMYAPFETGMLSGSARVYDHEIPG------GQYANLFVQCKSMGLGDRWEEVLDAYRDVNQLFGDIVKVTPSSKCVGDLALFLINKNLKAFDILDPEKTKNIDYPDSVVGLFEGRLGFPHRGFPDEV 1031          
BLAST of mRNA_Ecto-sp9_F_contig11293.1111.1 vs.
Match: Hypothetical (protein (Fragment) n=1 Tax=Polarella glacialis TaxID=89957 RepID=A0A813IYC5_POLGL)

HSP 1 Score: 346 bits (887), Expect = 5.360e-107
Identity = 174/314 (55.41%), Postives = 218/314 (69.43%), Query Frame = 1
Query:    1 NVVTEFVRLAAKNGIDVFRVFDCFNDVEQMRVCIEAVRKAGKVAEVCVCYTSDL--QTSSIFTVDYYKGVAKSAAEAGAHMIGIKDMAGLLKPRSAPLLVEAIRSVTDLPIHFHTHATSSCSLATALEMARAGCDVIDFATASMADCTSQPSLNGFLASTEGSEMAPEGTGYLGLEPYDVYWSRVRDMYSPFENGMKSGTARVFDHQIPGKRGEIRGQYSNLMVQCKSMGIWDKWEGVLDMYRDVNNLFGDIVKVTPSSKCVGDLALYLVTRGLKASDVTDPAKKGQVDFPDSVVGLLEGRLGFPHKGFPDEVM 936
            NVV EFVRLA KNG+D+FR+FDCFNDV QM+V I+AVRK  KVA V +C+T D   Q   I+T+DYY  +AK    AGAHM+ IKDMAGLL+P  A  LV AIRSVTDLP+HFHTH TSS  LAT   MA AGCD++D   AS+AD TSQPSLN F A+ +G    P+   +  LEP D YW R+R++Y  +E+GM +G+A V+ HQIPG      GQYSNL  QCK++GI  +WE  ++MY +VN   GDIVKVTPSSK VGD+AL LV   ++  D+ DP K   + +P S V + +G LG PH GFP  ++
Sbjct:   88 NVVEEFVRLACKNGMDIFRIFDCFNDVAQMQVAIDAVRKHNKVANVALCFTGDFLSQEEKIYTLDYYTQLAKQCVAAGAHMLTIKDMAGLLRPGHAGPLVNAIRSVTDLPVHFHTHNTSSAQLATLHAMADAGCDIVDACMASVADTTSQPSLNAFCATMKGHPRDPQ-IDFRSLEPLDNYWMRIRELYKIYESGMLAGSASVYHHQIPG------GQYSNLYAQCKALGIMGRWEECIEMYHEVNMFCGDIVKVTPSSKVVGDIALMLVLNNVQPHDLKDPEKLKSIRWPGSAVDMAQGGLGTPHHGFPQVML 394          
BLAST of mRNA_Ecto-sp9_F_contig11293.1111.1 vs.
Match: Acetyl-CoA (carboxytransferase n=1 Tax=Symbiodinium natans TaxID=878477 RepID=A0A812V7Y3_9DINO)

HSP 1 Score: 345 bits (886), Expect = 4.250e-106
Identity = 175/313 (55.91%), Postives = 222/313 (70.93%), Query Frame = 1
Query:    1 NVVTEFVRLAAKNGIDVFRVFDCFNDVEQMRVCIEAVRKAGKVAEVCVCYTSDLQT--SSIFTVDYYKGVAKSAAEAGAHMIGIKDMAGLLKPRSAPLLVEAIRSVTDLPIHFHTHATSSCSLATALEMARAGCDVIDFATASMADCTSQPSLNGFLASTEGSEMAPEGTGYLGLEPYDVYWSRVRDMYSPFENGMKSGTARVFDHQIPGKRGEIRGQYSNLMVQCKSMGIWDKWEGVLDMYRDVNNLFGDIVKVTPSSKCVGDLALYLVTRGLKASDVTDPAKKGQVDFPDSVVGLLEGRLGFPHKGFPDEV 933
            NVV EFVR AA +G+DVFR+FDCFNDV+QM++ I+AVRK  KVAEV +C+T D  +    I+T+ YY+ + K   +AGAHMI IKDMAGLLKP  A  L++ IRSVTDLPIHFHTH TSS  LAT   MA AGCD++D   A++AD TSQPSLN FLA+ EG    P+   +  LE  D YW++VRDMYSPFE+GMK+ TARVF+HQ+PG      GQYSN+  QC+ +G  + W+ VL MY DVN   GDIVKVTPSSK VGD+AL+L+ +G++ SD  +  K   + +P S + L  G +G PH GFP  +
Sbjct:  726 NVVEEFVRQAATSGMDVFRIFDCFNDVDQMKLSIDAVRKMKKVAEVAMCFTGDFLSPKEKIYTLGYYEELCKKCVDAGAHMIAIKDMAGLLKPAHAAPLIQVIRSVTDLPIHFHTHNTSSAQLATLHAMADAGCDIVDGCFAAIADGTSQPSLNAFLATMEGRPRDPK-IDHRMLEGLDSYWAKVRDMYSPFESGMKAMTARVFEHQVPG------GQYSNMYAQCRELGNAENWDQVLQMYADVNKWCGDIVKVTPSSKSVGDIALFLLKQGIQVSDFDNLPKMQALQWPQSAIELARGEMGTPHFGFPKRM 1031          
BLAST of mRNA_Ecto-sp9_F_contig11293.1111.1 vs.
Match: Acetyl-CoA (carboxytransferase n=1 Tax=Entamoeba invadens IP1 TaxID=370355 RepID=A0A0A1UA80_ENTIV)

HSP 1 Score: 345 bits (885), Expect = 4.420e-106
Identity = 168/311 (54.02%), Postives = 217/311 (69.77%), Query Frame = 1
Query:    1 NVVTEFVRLAAKNGIDVFRVFDCFNDVEQMRVCIEAVRKAGKVAEVCVCYTSDLQT--SSIFTVDYYKGVAKSAAEAGAHMIGIKDMAGLLKPRSAPLLVEAIRSVTDLPIHFHTHATSSCSLATALEMARAGCDVIDFATASMADCTSQPSLNGFLASTEGSEMAPEGTGYLGLEPYDVYWSRVRDMYSPFENGMKSGTARVFDHQIPGKRGEIRGQYSNLMVQCKSMGIWDKWEGVLDMYRDVNNLFGDIVKVTPSSKCVGDLALYLVTRGLKASDVTDPAKKGQVDFPDSVVGLLEGRLGFPHKGFPD 927
            N++ EFV  +A  GIDVFR+FDCFND+  M  C++AVR+A KVA+ C+C+T D  +    I+T+DYYKGVAK   E  AH I IKDMAGL KP+ A   ++A+R VTDLPI FH+H TS   L T + ++ AG   +D A  SM+DCTSQPS+   LA  EG E AP+   Y  LE  D  W  +R +Y   E+GMK GT RV++HQ+PG      GQYSNL  QCK++G+WD+W+ +  MY DVN + GDI+KVTPSSK VGDLAL+LV +GLKASDV D  K   ++FP+SV+GL  G+LG+PHKGFP+
Sbjct:  720 NLIKEFVNQSATIGIDVFRIFDCFNDINSMETCVKAVREANKVAQCCICFTGDFMSPEEKIYTLDYYKGVAKKITEIQAHCICIKDMAGLFKPQMAVPFLKALREVTDLPIFFHSHNTSGTMLNTLIALSAAGVAGVDVALPSMSDCTSQPSMGALLACLEGGERAPK-IDYRKLERVDSQWRSIRSLYFNNESGMKGGTTRVYEHQMPG------GQYSNLQAQCKALGLWDRWDEITQMYADVNKVLGDIIKVTPSSKVVGDLALFLVNKGLKASDVMD--KDVHIEFPESVIGLASGKLGYPHKGFPE 1021          
BLAST of mRNA_Ecto-sp9_F_contig11293.1111.1 vs.
Match: Acetyl-coenzyme (A carboxylase carboxyl transferase subunits beta/alpha n=2 Tax=Symbiodinium TaxID=2949 RepID=A0A812SQI9_9DINO)

HSP 1 Score: 345 bits (884), Expect = 9.540e-106
Identity = 177/313 (56.55%), Postives = 219/313 (69.97%), Query Frame = 1
Query:    1 NVVTEFVRLAAKNGIDVFRVFDCFNDVEQMRVCIEAVRKAGKVAEVCVCYTSDLQT--SSIFTVDYYKGVAKSAAEAGAHMIGIKDMAGLLKPRSAPLLVEAIRSVTDLPIHFHTHATSSCSLATALEMARAGCDVIDFATASMADCTSQPSLNGFLASTEGSEMAPEGTGYLGLEPYDVYWSRVRDMYSPFENGMKSGTARVFDHQIPGKRGEIRGQYSNLMVQCKSMGIWDKWEGVLDMYRDVNNLFGDIVKVTPSSKCVGDLALYLVTRGLKASDVTDPAKKGQVDFPDSVVGLLEGRLGFPHKGFPDEV 933
            NVV EFVR AA +G+DVFR+FDCFND+EQM+V I+AVRK  KVAE+ +C+T D  +    I+T+DYYK + K   +AGAHMI IKDMAGLLKP  A  +V+ IRSV DLPIHFHTH TSS  LAT   MA AGCD++D   A+ AD TSQPSLN FLA+ +G    P+   Y  LE  D YW+ VRDMYSPFE+GMK+ TARVF HQ+PG      GQYSN+  QC+S+G  + W+ VL MY +VN   GDIVKVTPSSK VGD+AL+LV  G++ SD  +  K   + +P S + L  G +G PH GFP  +
Sbjct:  724 NVVEEFVRQAATSGMDVFRIFDCFNDIEQMKVSIQAVRKMKKVAEIAMCFTGDFLSPDEKIYTLDYYKDLCKKCVDAGAHMIAIKDMAGLLKPAHAAPMVQVIRSVCDLPIHFHTHNTSSAQLATLHAMADAGCDIVDGCFAAFADGTSQPSLNAFLATMQGRPRDPK-IDYRQLEGLDAYWASVRDMYSPFESGMKAMTARVFQHQVPG------GQYSNMYAQCRSLG-GENWDKVLQMYAEVNMWCGDIVKVTPSSKAVGDIALFLVKHGIEPSDFDNIPKMQALHWPQSAIELARGEMGTPHFGFPKRM 1028          
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp9_F_contig11293.1111.1 vs.
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Ectocarpus species9 EcSCA_722f female vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
Pyruvate3.720e-21692.62carboxyltransferase domain-containing protein n=1 ... [more]
Acetyl-CoA4.060e-20796.78carboxytransferase n=1 Tax=Ectocarpus siliculosus ... [more]
Hypothetical7.490e-14768.83protein n=1 Tax=Heterosigma akashiwo TaxID=2829 Re... [more]
Acetyl-CoA7.390e-14571.06carboxytransferase n=1 Tax=Aureococcus anophageffe... [more]
Acetyl-CoA5.890e-14367.85carboxytransferase n=2 Tax=Sar TaxID=2698737 RepID... [more]
Acetyl-coenzyme8.090e-13865.81A carboxylase carboxyl transferase subunits beta/a... [more]
Hypothetical5.360e-10755.41protein (Fragment) n=1 Tax=Polarella glacialis Tax... [more]
Acetyl-CoA4.250e-10655.91carboxytransferase n=1 Tax=Symbiodinium natans Tax... [more]
Acetyl-CoA4.420e-10654.02carboxytransferase n=1 Tax=Entamoeba invadens IP1 ... [more]
Acetyl-coenzyme9.540e-10656.55A carboxylase carboxyl transferase subunits beta/a... [more]

Pages

back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp9_F_contig11293contigEcto-sp9_F_contig11293:360..3883 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 of Ectocarpus species9 EcSCA_722f female vs UniRef902022-09-19
OGS1.0 of Ectocarpus species9 EcSCA_722f female2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score611.3
Seed ortholog evalue2.6e-172
Seed eggNOG ortholog2880.D8LM14
EggNOG free text desc.pyruvate carboxylase activity
EggNOG OGsCOG1038@1,COG4799@1,KOG0369@2759,KOG0540@2759
Ec32 orthologEc-14_002460.1
COG Functional cat.C
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
Hectar predicted targeting categoryother localisation
Ec32 ortholog descriptioncarboxylase
Ec32 orthologEc-14_002460.2
Exons6
Model size963
Cds size963
Stop1
Start0
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp9_F_contig11293.1111.1prot_Ecto-sp9_F_contig11293.1111.1Ectocarpus species9 EcSCA_722f femalepolypeptideEcto-sp9_F_contig11293 360..3883 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622928373.6717377-CDS-Ecto-sp9_F_contig11293:359..5661622928373.6717377-CDS-Ecto-sp9_F_contig11293:359..566Ectocarpus species9 EcSCA_722f femaleCDSEcto-sp9_F_contig11293 360..566 -
1692277850.3858204-CDS-Ecto-sp9_F_contig11293:359..5661692277850.3858204-CDS-Ecto-sp9_F_contig11293:359..566Ectocarpus species9 EcSCA_722f femaleCDSEcto-sp9_F_contig11293 360..566 -
1622928373.684386-CDS-Ecto-sp9_F_contig11293:1047..11631622928373.684386-CDS-Ecto-sp9_F_contig11293:1047..1163Ectocarpus species9 EcSCA_722f femaleCDSEcto-sp9_F_contig11293 1048..1163 -
1692277850.3991356-CDS-Ecto-sp9_F_contig11293:1047..11631692277850.3991356-CDS-Ecto-sp9_F_contig11293:1047..1163Ectocarpus species9 EcSCA_722f femaleCDSEcto-sp9_F_contig11293 1048..1163 -
1622928373.6944647-CDS-Ecto-sp9_F_contig11293:1912..21031622928373.6944647-CDS-Ecto-sp9_F_contig11293:1912..2103Ectocarpus species9 EcSCA_722f femaleCDSEcto-sp9_F_contig11293 1913..2103 -
1692277850.4136164-CDS-Ecto-sp9_F_contig11293:1912..21031692277850.4136164-CDS-Ecto-sp9_F_contig11293:1912..2103Ectocarpus species9 EcSCA_722f femaleCDSEcto-sp9_F_contig11293 1913..2103 -
1622928373.7157266-CDS-Ecto-sp9_F_contig11293:2648..28481622928373.7157266-CDS-Ecto-sp9_F_contig11293:2648..2848Ectocarpus species9 EcSCA_722f femaleCDSEcto-sp9_F_contig11293 2649..2848 -
1692277850.422657-CDS-Ecto-sp9_F_contig11293:2648..28481692277850.422657-CDS-Ecto-sp9_F_contig11293:2648..2848Ectocarpus species9 EcSCA_722f femaleCDSEcto-sp9_F_contig11293 2649..2848 -
1622928373.7306862-CDS-Ecto-sp9_F_contig11293:3151..32651622928373.7306862-CDS-Ecto-sp9_F_contig11293:3151..3265Ectocarpus species9 EcSCA_722f femaleCDSEcto-sp9_F_contig11293 3152..3265 -
1692277850.430609-CDS-Ecto-sp9_F_contig11293:3151..32651692277850.430609-CDS-Ecto-sp9_F_contig11293:3151..3265Ectocarpus species9 EcSCA_722f femaleCDSEcto-sp9_F_contig11293 3152..3265 -
1622928373.7435422-CDS-Ecto-sp9_F_contig11293:3748..38831622928373.7435422-CDS-Ecto-sp9_F_contig11293:3748..3883Ectocarpus species9 EcSCA_722f femaleCDSEcto-sp9_F_contig11293 3749..3883 -
1692277850.4387836-CDS-Ecto-sp9_F_contig11293:3748..38831692277850.4387836-CDS-Ecto-sp9_F_contig11293:3748..3883Ectocarpus species9 EcSCA_722f femaleCDSEcto-sp9_F_contig11293 3749..3883 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_Ecto-sp9_F_contig11293.1111.1

>prot_Ecto-sp9_F_contig11293.1111.1 ID=prot_Ecto-sp9_F_contig11293.1111.1|Name=mRNA_Ecto-sp9_F_contig11293.1111.1|organism=Ectocarpus species9 EcSCA_722f female|type=polypeptide|length=321bp
NVVTEFVRLAAKNGIDVFRVFDCFNDVEQMRVCIEAVRKAGKVAEVCVCY
TSDLQTSSIFTVDYYKGVAKSAAEAGAHMIGIKDMAGLLKPRSAPLLVEA
IRSVTDLPIHFHTHATSSCSLATALEMARAGCDVIDFATASMADCTSQPS
LNGFLASTEGSEMAPEGTGYLGLEPYDVYWSRVRDMYSPFENGMKSGTAR
VFDHQIPGKRGEIRGQYSNLMVQCKSMGIWDKWEGVLDMYRDVNNLFGDI
VKVTPSSKCVGDLALYLVTRGLKASDVTDPAKKGQVDFPDSVVGLLEGRL
GFPHKGFPDEVMGCYACYVV*
back to top

mRNA from alignment at Ecto-sp9_F_contig11293:360..3883-

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_Ecto-sp9_F_contig11293.1111.1 ID=mRNA_Ecto-sp9_F_contig11293.1111.1|Name=mRNA_Ecto-sp9_F_contig11293.1111.1|organism=Ectocarpus species9 EcSCA_722f female|type=mRNA|length=3524bp|location=Sequence derived from alignment at Ecto-sp9_F_contig11293:360..3883- (Ectocarpus species9 EcSCA_722f female)
AACGTGGTGACGGAGTTCGTCCGCCTCGCGGCGAAGAACGGGATCGACGT GTTCCGGGTGTTCGACTGCTTCAACGACGTCGAACAGATGCGCGTGTGCA TCGAGGCCGTCCGCAAGGCCGGGAAGGTTGCCGAGGTATGTATGCTACGT GTGTATGAGAGTATTAAGGTTTTTTAAGTTGCAGCGCGCGGGGTCCCGGG GGGGGGGGGGTGGGGGGCTACGCATCAGGATGAGGGGGCTACGCATCGGG ATGACTGCTGCCGAGACATGATACACTGCTGTATACATAAATGATTCTTT GTTTTTTGGTGGGTTGTGTGTTGCTGTGGTGAGGTATGCACGGGGTTTTA TGAGTCATGGGGAGGGGACAGCAGGACAAGGCACGAGGGGACGAATTTTT TTTTAATACACGGGGAGTGGTGTACGTTCGCTTGGCAAGACAAACGTGCG TGAAAACAGCAACGGCGTTCGTACTGTTTTCTGGTGGCATTTCTTGACGG GGGCTAACGCACTGCTGCTGCTGTCGCACGCTGCCACCGAACGCGAAAAA CAAAACAAATCTCCTCTTTCTGTGTCTCGCGTCGAAACAATCGTCGGTCG GTATCGGACACGCCAAAGGTGTGCGTGTGCTACACGTCAGACTTGCAGAC GTCGTCCATATTTACGGTGGACTACTACAAGGGGGTGGCCAAGAGCGCCG CGGAGGCCGGGGCGCACATGATCGGCATCAAGGTGAGAAGGGAGCGTTGT AGTAGATAGTAGTGGTAGACGCGGCCCATTTACACCTGACGCACGTATCT GTCGGGGTTGTTTTGGTTGGGGTGTGTTTACCGCGTTACCATCATCATCA TCATCATCATTGCCATGAGCAACAACACGAACGACAGCAACAGTACAATA GCAGCAACCTCAACACATTTTTTTAACTGTCCACGAAAAGACGCAGAATA TCGTTTTTTTTTTTTTAAATGGCTCGGTCCTTGGTGTGTTCGTTCCTTCG TTCCTTCGTTCCGGCGCGCGCGTGTGTGTGTGCAGGACATGGCTGGCCTG TTGAAGCCGCGGTCCGCGCCGCTGCTGGTGGAGGCGATCCGCTCCGTCAC CGACCTGCCCATCCACTTCCACACCCACGCCACCAGCTCCTGCTCGCTGG CCACGGCGCTCGAGATGGCCCGCGCGGGGTGCGACGTGATCGACTTCGCG ACGGCGTCCATGGCGGACTGCACCTCACAGCCGAGGTAATATTAGTAGGC ACGCCTAGTCTACGGAGGTTAAGCAACATGTTGGAAGGCATAGAATCGGC GAAACTGGGGTTAAAGGTTTGCCCCTGCTTGACAGAAGAATACATTGGAT CTATGCATACACACGCGTAGATTTGATGCAGAGTAAGTAAGAGTGCATGC TTTCACTGGTTGTCTCGGCAACATATTAGTTACTGCGTACGTATTGTAGG GAGACTATTGTAGAACGCTTGGAAGGAAAAACAAAACAACGGAGAAATAT CCGACGGCGGCGGAGGGAAGCACTCGAGTGTATCACCAGATTAAAGTGGT ACAACCGCAGTCTTCTCATCTCCTTGGTCGAAATCTGCGCACACCAAAGC TTGCTCTCCACGTTCTTAGGTTCCGTTATTTTCTGATCTAAACCGCTCTA AGTTTCATAGTTTGGTGTTCTAACCTAACTGCTGTACATTGATTGATCCT CATGTGCCCGTTGTCTGTTGTTGTTGCGTTCTCCGGAATCGACTCTCGAA CCACAACACCCGGGAATGAACTACACACAGCCTGAACGGTTTCTTGGCGT CCACGGAGGGGAGCGAGATGGCTCCGGAGGGCACCGGATACCTGGGTCTC GAGCCGTACGACGTGTACTGGAGCAGGGTGCGGGACATGTACAGCCCGTT TGAGAACGGCATGAAGAGCGGCACCGCCAGGGTGTTCGACCACCAGATCC CAGGCAAGAGAGGGGAGATACGTATTTCTTGTTCGAGGCAGAGGAAGGCA AAAGTAGTTGAAGTGTTGTATGCATATGTCTGTTTTTTGGGCCGGGGGTC TCTCCAGTGTACGTGTGTCGGGCAGTTGTAGGGATATGTGGTTCTTTTTT TTTTTCTTCTGTTATTTGGTTGTTTTTTTGGGGAGGGGAAAATCTCCCCA GCGTACGTGTGTCGAGAAGGGCAACGGTAAGTCTCGCTCCTACACTGGTC GGTCTTGGCGGTTTTTGTGATGTCGGTCGGCGAGTGTGGGTCTCTTTCGA CGTTCGTTCTTACTCTACGGACAAATGGCACCTGGTCCTGAGGACAGCGC TTGCGCTGCTGCTCTGGTCCCATGTTATGACGGCCATAGCACGTCGACTG GCTTGGTGTGCACAATACATACTTCCTCTTGGAAGCGGGACGTTTTTCCT CGCTGCGCATCGATGGTTAAGCCGTTGCACCGGGCGGGCTTTGGTTGTGC TCTGTTTTTGGGTGCTACCGCCGTCGCCATACCGACAGAGAGATGCATAA GAAGCTACCCCCGTGACGATTGAGAGAGGGGGTTTACGCCTCATGTGATC CTTTCTCTTCTTCTATGCTCTTTTGACTGGCGGGCGGGGCGCATTTACAC GCTTCCCCCTTTGGAAATACCCTTCGCAAACGGTAGGGTAGGGTAGCATC TCTCCAACGTCATTTCACACCTCCCTGCTTTGTTTTCTCGCGCGTTTATT TGTTGAACGCGTGTGTGCAGGCGGGCAGTACTCGAACCTGATGGTCCAGT GCAAGAGCATGGGCATCTGGGACAAGTGGGAGGGAGTGCTGGACATGTAC CGCGACGTCAACAACCTCTTCGGCGATATCGTCAAGGTATAGAAAGAGGG CGCGGTTTATCGCTTGTTGTGAGGACATGGTTATTGACACGGGTGAGGCT TGAAGAGAAGAGATATGCGTAATTGACTCAAACCCCGCGTTTATCAACCA CGCCTATTTGGAGAAGAGAGAGAGAGCAGCCACGATGACATGCTGAGCTG CCCTCCCCCCTTTGTGGGGTAAACACGCCAACAGCCCTTTTACTGTTAGT ACCCTTGCGCCAGCCGCGGCCACCCCCGAGACTACGACGACGGCAGTAGC GATCGTGTCCCGGCCCTACTGCTGTATCGTCTCCTCCCTTCGTCCGGACA ACGTTCCAGGGAACAGTACTCGTAACGTTCCAGGGTACAAGCACGGCTGC TCCTAGATGTTCCGCCAACGACCAGTGTTTACGATCATTGCGACGACGAT CGTTACGATAAGTATGTCGATGGTTGGTGCCCGTGTTGTCCGGCATTGCG GCCGGGGTTCCGCGCAGGTGACGCCCTCGAGTAAGTGCGTCGGCGACCTG GCGCTGTACCTGGTGACGAGGGGCCTCAAGGCGTCGGACGTGACCGATCC CGCCAAGAAGGGGCAGGTGGATTTCCCGGACTCGGTCGTCGGGCTGCTGG AGGGGCGCCTCGGCTTCCCGCACAAGGGTTTCCCGGATGAGGTAATGGGT TGCTATGCTTGCTATGTTGTCTAG
back to top

Coding sequence (CDS) from alignment at Ecto-sp9_F_contig11293:360..3883-

>mRNA_Ecto-sp9_F_contig11293.1111.1 ID=mRNA_Ecto-sp9_F_contig11293.1111.1|Name=mRNA_Ecto-sp9_F_contig11293.1111.1|organism=Ectocarpus species9 EcSCA_722f female|type=CDS|length=1926bp|location=Sequence derived from alignment at Ecto-sp9_F_contig11293:360..3883- (Ectocarpus species9 EcSCA_722f female)
AACGTGGTGACGGAGTTCGTCCGCCTCGCGGCGAAGAACGGGATCGACGT
GTTCCGGGTGTTCGACTGCTTCAACGACGTCGAACAGATGCGCGTGTGCA
TCGAGGCCGTCCGCAAGGCCGGGAAGGTTGCCGAGAACGTGGTGACGGAG
TTCGTCCGCCTCGCGGCGAAGAACGGGATCGACGTGTTCCGGGTGTTCGA
CTGCTTCAACGACGTCGAACAGATGCGCGTGTGCATCGAGGCCGTCCGCA
AGGCCGGGAAGGTTGCCGAGGTGTGCGTGTGCTACACGTCAGACTTGCAG
ACGTCGTCCATATTTACGGTGGACTACTACAAGGGGGTGGCCAAGAGCGC
CGCGGAGGCCGGGGCGCACATGATCGGCATCAAGGTGTGCGTGTGCTACA
CGTCAGACTTGCAGACGTCGTCCATATTTACGGTGGACTACTACAAGGGG
GTGGCCAAGAGCGCCGCGGAGGCCGGGGCGCACATGATCGGCATCAAGGA
CATGGCTGGCCTGTTGAAGCCGCGGTCCGCGCCGCTGCTGGTGGAGGCGA
TCCGCTCCGTCACCGACCTGCCCATCCACTTCCACACCCACGCCACCAGC
TCCTGCTCGCTGGCCACGGCGCTCGAGATGGCCCGCGCGGGGTGCGACGT
GATCGACTTCGCGACGGCGTCCATGGCGGACTGCACCTCACAGCCGAGGA
CATGGCTGGCCTGTTGAAGCCGCGGTCCGCGCCGCTGCTGGTGGAGGCGA
TCCGCTCCGTCACCGACCTGCCCATCCACTTCCACACCCACGCCACCAGC
TCCTGCTCGCTGGCCACGGCGCTCGAGATGGCCCGCGCGGGGTGCGACGT
GATCGACTTCGCGACGGCGTCCATGGCGGACTGCACCTCACAGCCGAGCC
TGAACGGTTTCTTGGCGTCCACGGAGGGGAGCGAGATGGCTCCGGAGGGC
ACCGGATACCTGGGTCTCGAGCCGTACGACGTGTACTGGAGCAGGGTGCG
GGACATGTACAGCCCGTTTGAGAACGGCATGAAGAGCGGCACCGCCAGGG
TGTTCGACCACCAGATCCCAGGCAAGAGAGGGGAGATACCCTGAACGGTT
TCTTGGCGTCCACGGAGGGGAGCGAGATGGCTCCGGAGGGCACCGGATAC
CTGGGTCTCGAGCCGTACGACGTGTACTGGAGCAGGGTGCGGGACATGTA
CAGCCCGTTTGAGAACGGCATGAAGAGCGGCACCGCCAGGGTGTTCGACC
ACCAGATCCCAGGCAAGAGAGGGGAGATACGCGGGCAGTACTCGAACCTG
ATGGTCCAGTGCAAGAGCATGGGCATCTGGGACAAGTGGGAGGGAGTGCT
GGACATGTACCGCGACGTCAACAACCTCTTCGGCGATATCGTCAAGGCGG
GCAGTACTCGAACCTGATGGTCCAGTGCAAGAGCATGGGCATCTGGGACA
AGTGGGAGGGAGTGCTGGACATGTACCGCGACGTCAACAACCTCTTCGGC
GATATCGTCAAGGTGACGCCCTCGAGTAAGTGCGTCGGCGACCTGGCGCT
GTACCTGGTGACGAGGGGCCTCAAGGCGTCGGACGTGACCGATCCCGCCA
AGAAGGGGCAGGTGGATTTCCCGGACTCGGTCGTCGGGCTGCTGGAGGGG
CGCCTCGGCTTCCCGCACAAGGGTTTCCCGGATGAGGTAATGGGTTGCTA
TGCTTGCTATGTTGTCTAGGTGACGCCCTCGAGTAAGTGCGTCGGCGACC
TGGCGCTGTACCTGGTGACGAGGGGCCTCAAGGCGTCGGACGTGACCGAT
CCCGCCAAGAAGGGGCAGGTGGATTTCCCGGACTCGGTCGTCGGGCTGCT
GGAGGGGCGCCTCGGCTTCCCGCACAAGGGTTTCCCGGATGAGGTAATGG
GTTGCTATGCTTGCTATGTTGTCTAG
back to top