prot_Ecto-sp9_F_contig10057.94.1 (polypeptide) Ectocarpus species9 EcSCA_722f female

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp9_F_contig10057.94.1
Unique Nameprot_Ecto-sp9_F_contig10057.94.1
Typepolypeptide
OrganismEctocarpus species9 EcSCA_722f female (Ectocarpus species9 EcSCA_722f female)
Sequence length58
Homology
BLAST of mRNA_Ecto-sp9_F_contig10057.94.1 vs.
Match: CRM1_C (domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JJK2_9PHAE)

HSP 1 Score: 120 bits (301), Expect = 2.380e-30
Identity = 58/58 (100.00%), Postives = 58/58 (100.00%), Query Frame = 0
Query:    1 MKSHLGMLETPETQPVLLAGMEYLVAISEVPDDEVFKICLEFYHHFSSDLYQASATRH 58
            MKSHLGMLETPETQPVLLAGMEYLVAISEVPDDEVFKICLEFYHHFSSDLYQASATRH
Sbjct:  172 MKSHLGMLETPETQPVLLAGMEYLVAISEVPDDEVFKICLEFYHHFSSDLYQASATRH 229          
BLAST of mRNA_Ecto-sp9_F_contig10057.94.1 vs.
Match: CRM1_C (domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LS67_ECTSI)

HSP 1 Score: 108 bits (269), Expect = 5.000e-26
Identity = 51/52 (98.08%), Postives = 52/52 (100.00%), Query Frame = 0
Query:    1 MKSHLGMLETPETQPVLLAGMEYLVAISEVPDDEVFKICLEFYHHFSSDLYQ 52
            MKSHLGMLETPETQPVLLAGMEYLV+ISEVPDDEVFKICLEFYHHFSSDLYQ
Sbjct:  161 MKSHLGMLETPETQPVLLAGMEYLVSISEVPDDEVFKICLEFYHHFSSDLYQ 212          
BLAST of mRNA_Ecto-sp9_F_contig10057.94.1 vs.
Match: Exportin1 (n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YZ33_9STRA)

HSP 1 Score: 73.2 bits (178), Expect = 1.030e-13
Identity = 33/55 (60.00%), Postives = 40/55 (72.73%), Query Frame = 0
Query:    1 MKSHLGMLETPETQPVLLAGMEYLVAISEVPDDEVFKICLEFYHHFSSDLYQASA 55
            ++ HL  LE PE    LL G+ Y+V ISEVPDDEVFKICLE+YH  S DLYQ+ +
Sbjct:  301 LRPHLSTLEVPEGMAALLEGLSYVVRISEVPDDEVFKICLEYYHALSQDLYQSDS 355          
BLAST of mRNA_Ecto-sp9_F_contig10057.94.1 vs.
Match: Hypothetical (protein n=2 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2AWL8_9STRA)

HSP 1 Score: 71.6 bits (174), Expect = 3.600e-13
Identity = 35/56 (62.50%), Postives = 45/56 (80.36%), Query Frame = 0
Query:    2 KSHLGMLETPETQPVLLAGMEYLVAISEVPDDEVFKICLEFYHHFSSDLYQASATR 57
            ++HL +LETPE    L+ GM YL+ ISEVPD+EVFKICLE++H FSS+LY AS T+
Sbjct:  329 RTHLSLLETPEQTGSLMQGMLYLIGISEVPDNEVFKICLEYWHVFSSELY-ASETQ 383          
BLAST of mRNA_Ecto-sp9_F_contig10057.94.1 vs.
Match: Hypothetical (protein (Fragment) n=1 Tax=Pseudictyota dubia TaxID=2749911 RepID=A0A7R9ZGK4_9STRA)

HSP 1 Score: 67.4 bits (163), Expect = 1.380e-12
Identity = 32/52 (61.54%), Postives = 39/52 (75.00%), Query Frame = 0
Query:    2 KSHLGMLETPETQPVLLAGMEYLVAISEVPDDEVFKICLEFYHHFSSDLYQA 53
            K+HL  LET E+Q  LL GM YLV +SEVPD E+F+ICLE +H  + DLYQA
Sbjct:   91 KAHLRTLETNESQQALLTGMFYLVRVSEVPDVEIFRICLEAWHMLAQDLYQA 142          
BLAST of mRNA_Ecto-sp9_F_contig10057.94.1 vs.
Match: Hypothetical (protein n=1 Tax=Trieres chinensis TaxID=1514140 RepID=A0A7S1YZM0_TRICV)

HSP 1 Score: 69.3 bits (168), Expect = 2.340e-12
Identity = 33/57 (57.89%), Postives = 41/57 (71.93%), Query Frame = 0
Query:    2 KSHLGMLETPETQPVLLAGMEYLVAISEVPDDEVFKICLEFYHHFSSDLYQASATRH 58
            K+HL +LET E+Q  LL GM YLV +SEVPD E+F+ICLE +H  + DLYQA    H
Sbjct:  341 KAHLRILETQESQQALLTGMFYLVRVSEVPDVEIFRICLEAWHMLAQDLYQAENKLH 397          
BLAST of mRNA_Ecto-sp9_F_contig10057.94.1 vs.
Match: Hypothetical (protein n=1 Tax=Trieres chinensis TaxID=1514140 RepID=A0A7S1YZH3_TRICV)

HSP 1 Score: 69.3 bits (168), Expect = 2.350e-12
Identity = 33/57 (57.89%), Postives = 41/57 (71.93%), Query Frame = 0
Query:    2 KSHLGMLETPETQPVLLAGMEYLVAISEVPDDEVFKICLEFYHHFSSDLYQASATRH 58
            K+HL +LET E+Q  LL GM YLV +SEVPD E+F+ICLE +H  + DLYQA    H
Sbjct:  341 KAHLRILETQESQQALLTGMFYLVRVSEVPDVEIFRICLEAWHMLAQDLYQAENKLH 397          
BLAST of mRNA_Ecto-sp9_F_contig10057.94.1 vs.
Match: Hypothetical (protein n=1 Tax=Pelagomonas calceolata TaxID=35677 RepID=A0A8J2X2G4_9STRA)

HSP 1 Score: 67.8 bits (164), Expect = 8.180e-12
Identity = 31/56 (55.36%), Postives = 41/56 (73.21%), Query Frame = 0
Query:    2 KSHLGMLETPETQPVLLAGMEYLVAISEVPDDEVFKICLEFYHHFSSDLYQASATR 57
            K+HL ++ET E  P+LL G+ YLV IS VPD+EVF+ICL+F+H F+ DLY     R
Sbjct:  330 KAHLRLVETREQGPLLLDGLNYLVRISAVPDNEVFQICLDFWHAFAQDLYATETGR 385          
BLAST of mRNA_Ecto-sp9_F_contig10057.94.1 vs.
Match: Hypothetical (protein (Fragment) n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A6V1W3N7_HETAK)

HSP 1 Score: 66.6 bits (161), Expect = 1.890e-11
Identity = 30/43 (69.77%), Postives = 34/43 (79.07%), Query Frame = 0
Query:    2 KSHLGMLETPETQPVLLAGMEYLVAISEVPDDEVFKICLEFYH 44
            K+HL +LET E Q  LL G+ YLV ISE PDDEVFKICLE+YH
Sbjct:  327 KAHLSLLETAERQQALLQGLYYLVCISEAPDDEVFKICLEYYH 369          
BLAST of mRNA_Ecto-sp9_F_contig10057.94.1 vs.
Match: Exportin (n=8 Tax=Chlamydomonadales TaxID=3042 RepID=A8J2W2_CHLRE)

HSP 1 Score: 66.6 bits (161), Expect = 2.090e-11
Identity = 30/55 (54.55%), Postives = 43/55 (78.18%), Query Frame = 0
Query:    2 KSHLGMLETPETQPVLLAGMEYLVAISEVPDDEVFKICLEFYHHFSSDLYQASAT 56
            K+H+G+LETPETQ  LLAG++YLV IS V + EVFK CL++++ F  D+Y +S +
Sbjct:  322 KAHIGILETPETQQQLLAGLDYLVNISYVDNTEVFKTCLDYWNFFVPDIYTSSCS 376          
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp9_F_contig10057.94.1 vs.
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Ectocarpus species9 EcSCA_722f female vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
CRM1_C2.380e-30100.00domain-containing protein n=1 Tax=Ectocarpus sp. C... [more]
CRM1_C5.000e-2698.08domain-containing protein n=1 Tax=Ectocarpus silic... [more]
Exportin11.030e-1360.00n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Y... [more]
Hypothetical3.600e-1362.50protein n=2 Tax=Dictyocha speculum TaxID=35687 Rep... [more]
Hypothetical1.380e-1261.54protein (Fragment) n=1 Tax=Pseudictyota dubia TaxI... [more]
Hypothetical2.340e-1257.89protein n=1 Tax=Trieres chinensis TaxID=1514140 Re... [more]
Hypothetical2.350e-1257.89protein n=1 Tax=Trieres chinensis TaxID=1514140 Re... [more]
Hypothetical8.180e-1255.36protein n=1 Tax=Pelagomonas calceolata TaxID=35677... [more]
Hypothetical1.890e-1169.77protein (Fragment) n=1 Tax=Heterosigma akashiwo Ta... [more]
Exportin2.090e-1154.55n=8 Tax=Chlamydomonadales TaxID=3042 RepID=A8J2W2_... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0 of Ectocarpus species9 EcSCA_722f female
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR011989Armadillo-like helicalGENE3D1.25.10.10coord: 1..58
e-value: 2.8E-11
score: 44.0
IPR041123Chromosome region maintenance repeatPFAMPF18777CRM1_repeatcoord: 16..51
e-value: 6.6E-19
score: 67.1

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp9_F_contig10057contigEcto-sp9_F_contig10057:3312..4128 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Ectocarpus species9 EcSCA_722f female2022-09-29
Diamond blastp: OGS1.0 of Ectocarpus species9 EcSCA_722f female vs UniRef902022-09-16
OGS1.0 of Ectocarpus species9 EcSCA_722f female2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp9_F_contig10057.94.1mRNA_Ecto-sp9_F_contig10057.94.1Ectocarpus species9 EcSCA_722f femalemRNAEcto-sp9_F_contig10057 3312..4134 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp9_F_contig10057.94.1 ID=prot_Ecto-sp9_F_contig10057.94.1|Name=mRNA_Ecto-sp9_F_contig10057.94.1|organism=Ectocarpus species9 EcSCA_722f female|type=polypeptide|length=58bp
MKSHLGMLETPETQPVLLAGMEYLVAISEVPDDEVFKICLEFYHHFSSDL
YQASATRH
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR011989ARM-like
IPR041123CRM1_repeat