prot_Ecto-sp9_F_contig11078.938.1 (polypeptide) Ectocarpus species9 EcSCA_722f female

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp9_F_contig11078.938.1
Unique Nameprot_Ecto-sp9_F_contig11078.938.1
Typepolypeptide
OrganismEctocarpus species9 EcSCA_722f female (Ectocarpus species9 EcSCA_722f female)
Sequence length86
Homology
BLAST of mRNA_Ecto-sp9_F_contig11078.938.1 vs.
Match: STI1 (domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G5M9_ECTSI)

HSP 1 Score: 114 bits (285), Expect = 1.750e-31
Identity = 60/60 (100.00%), Postives = 60/60 (100.00%), Query Frame = 0
Query:   26 DMIGKMMNNPKAMEAFQKAQSNXXVMAAIQDVTQNGMSAMSKYQDDPEILAIIEELKGLF 85
            DMIGKMMNNPKAMEAFQKAQSNXXVMAAIQDVTQNGMSAMSKYQDDPEILAIIEELKGLF
Sbjct:   26 DMIGKMMNNPKAMEAFQKAQSNXXVMAAIQDVTQNGMSAMSKYQDDPEILAIIEELKGLF 85          
BLAST of mRNA_Ecto-sp9_F_contig11078.938.1 vs.
Match: Uncharacterized (protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G4D5_ECTSI)

HSP 1 Score: 114 bits (285), Expect = 1.130e-27
Identity = 60/60 (100.00%), Postives = 60/60 (100.00%), Query Frame = 0
Query:   26 DMIGKMMNNPKAMEAFQKAQSNXXVMAAIQDVTQNGMSAMSKYQDDPEILAIIEELKGLF 85
            DMIGKMMNNPKAMEAFQKAQSNXXVMAAIQDVTQNGMSAMSKYQDDPEILAIIEELKGLF
Sbjct:  828 DMIGKMMNNPKAMEAFQKAQSNXXVMAAIQDVTQNGMSAMSKYQDDPEILAIIEELKGLF 887          
BLAST of mRNA_Ecto-sp9_F_contig11078.938.1 vs.
Match: Hypothetical (protein n=1 Tax=Aureoumbra lagunensis TaxID=44058 RepID=A0A7S3JZ43_9STRA)

HSP 1 Score: 63.2 bits (152), Expect = 4.320e-11
Identity = 32/56 (57.14%), Postives = 37/56 (66.07%), Query Frame = 0
Query:   30 KMMNNPKAMEAFQKAQSNXXVMAAIQDVTQNGMSAMSKYQDDPEILAIIEELKGLF 85
            K    P  MEA QKA  N  + AA+ DV  NG+SAMSKY  DPEI+A + ELKGLF
Sbjct:   44 KAEGKPGMMEALQKAAQNPKLKAAVLDVQANGISAMSKYASDPEIMATLNELKGLF 99          
BLAST of mRNA_Ecto-sp9_F_contig11078.938.1 vs.
Match: Tyrosine--tRNA (ligase n=1 Tax=Nannochloropsis salina CCMP1776 TaxID=1027361 RepID=A0A4D9CNM3_9STRA)

HSP 1 Score: 52.4 bits (124), Expect = 6.860e-6
Identity = 28/55 (50.91%), Postives = 38/55 (69.09%), Query Frame = 0
Query:   27 MIGKMMNNPKAMEAFQKAQSNXXVMAAIQDVTQNGMSAMSKYQDDPEILAIIEEL 81
            M+  +M+NP+A  AFQ+AQ N  VMAA+QDV  N  +  SKY +D EI +I+ EL
Sbjct:  357 MLASIMSNPRAQAAFQRAQRNPKVMAALQDVLANPGN-FSKYANDKEISSILNEL 410          
BLAST of mRNA_Ecto-sp9_F_contig11078.938.1 vs.
Match: Uncharacterized (protein n=1 Tax=Raphidocelis subcapitata TaxID=307507 RepID=A0A2V0PNJ0_9CHLO)

HSP 1 Score: 51.2 bits (121), Expect = 1.690e-5
Identity = 27/60 (45.00%), Postives = 40/60 (66.67%), Query Frame = 0
Query:   26 DMIGKMMNNPKAMEAFQKAQSNXXVMAAIQDVTQNGMSAMSKYQDDPEILAIIEELKGLF 85
            D+I K++ NP+    F    SN  V AAI D++QN M+ M KYQ+DPEI+ ++E++  LF
Sbjct:  419 DVISKVLENPELASGF----SNPKVQAAIFDISQNPMNVM-KYQEDPEIMKVLEKVTELF 473          
BLAST of mRNA_Ecto-sp9_F_contig11078.938.1 vs.
Match: Uncharacterized (protein n=1 Tax=Monoraphidium neglectum TaxID=145388 RepID=A0A0D2MID1_9CHLO)

HSP 1 Score: 49.3 bits (116), Expect = 8.030e-5
Identity = 26/60 (43.33%), Postives = 39/60 (65.00%), Query Frame = 0
Query:   26 DMIGKMMNNPKAMEAFQKAQSNXXVMAAIQDVTQNGMSAMSKYQDDPEILAIIEELKGLF 85
            D+I K++ NP     F    +N  V AAI D++QN M+ M KYQ+DPEI+ ++E++  LF
Sbjct:  378 DVISKVLENPDLASGF----ANPKVQAAIFDISQNPMNVM-KYQEDPEIMKVLEKVTELF 432          
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp9_F_contig11078.938.1 vs.
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Ectocarpus species9 EcSCA_722f female vs UniRef90)
Total hits: 6
Match NameE-valueIdentityDescription
STI11.750e-31100.00domain-containing protein n=1 Tax=Ectocarpus silic... [more]
Uncharacterized1.130e-27100.00protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 ... [more]
Hypothetical4.320e-1157.14protein n=1 Tax=Aureoumbra lagunensis TaxID=44058 ... [more]
Tyrosine--tRNA6.860e-650.91ligase n=1 Tax=Nannochloropsis salina CCMP1776 Tax... [more]
Uncharacterized1.690e-545.00protein n=1 Tax=Raphidocelis subcapitata TaxID=307... [more]
Uncharacterized8.030e-543.33protein n=1 Tax=Monoraphidium neglectum TaxID=1453... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0 of Ectocarpus species9 EcSCA_722f female
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableGENE3D1.10.260.100coord: 25..85
e-value: 2.5E-17
score: 64.5
NoneNo IPR availablePANTHERPTHR47296FAMILY NOT NAMEDcoord: 25..85
IPR041243STI1 domainPFAMPF17830STI1coord: 26..83
e-value: 8.4E-9
score: 35.2

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp9_F_contig11078contigEcto-sp9_F_contig11078:1024..1644 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Ectocarpus species9 EcSCA_722f female2022-09-29
Diamond blastp: OGS1.0 of Ectocarpus species9 EcSCA_722f female vs UniRef902022-09-16
OGS1.0 of Ectocarpus species9 EcSCA_722f female2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp9_F_contig11078.938.1mRNA_Ecto-sp9_F_contig11078.938.1Ectocarpus species9 EcSCA_722f femalemRNAEcto-sp9_F_contig11078 1024..1644 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp9_F_contig11078.938.1 ID=prot_Ecto-sp9_F_contig11078.938.1|Name=mRNA_Ecto-sp9_F_contig11078.938.1|organism=Ectocarpus species9 EcSCA_722f female|type=polypeptide|length=86bp
MGGAGGAGGGGAPGGGGGGGMGGMGDMIGKMMNNPKAMEAFQKAQSNPKV
MAAIQDVTQNGMSAMSKYQDDPEILAIIEELKGLF*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR041243STI1