mRNA_Ecto-sp9_F_contig1097.846.1 (mRNA) Ectocarpus species9 EcSCA_722f female

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_Ecto-sp9_F_contig1097.846.1
Unique NamemRNA_Ecto-sp9_F_contig1097.846.1
TypemRNA
OrganismEctocarpus species9 EcSCA_722f female (Ectocarpus species9 EcSCA_722f female)
Homology
BLAST of mRNA_Ecto-sp9_F_contig1097.846.1 vs.
Match: Anamorsin (homolog n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FUN0_ECTSI)

HSP 1 Score: 524 bits (1350), Expect = 8.740e-183
Identity = 300/309 (97.09%), Postives = 303/309 (98.06%), Query Frame = 1
Query:    4 PPLSLAPAPAGSKALVVCRRGSEEASAAQQWASRSRSDGATVSVCPPGHLESHARANAGAYDTIVVEEAGEGAVLGQVVKLLKAGGNVNVAASSQGGEADAAAALKRALTFAGFLNVAANPEDPGVLSGERAAWETGASAPVRLSFGASKNGSRNGTNGNGPAAXXXXXXXNKTWKLALDXXXXXXXXXXXXXLIDEDALLESSAPVKRASETAGDGCATKRRACKDCSCGRAEMEMSGGVSNTNGGAAGPLPVVSVGDVDDALTSACGNCSKGDAFRCGGCPFLGKPAFEKGQEKTIMLLDLDSQQDD 930
            PPLS APAPAGSKALVVCRR SEEAS+AQQWASRSRSDG +VSVCPPGHLESHARANAGAYDTIVVEEAGEGAVLGQVVKLLKAGGN+NVAASSQGGEA AAAALKRALTFAGFLNVAANPEDP VLSGERAAWETGASAPVRLSFGASKN SRNGTNGNGPAAXXXXXXXNKTWKLALDXXXXXXXXXXXXXLIDEDALLESSAPVKRASETAGDGCATKRRACKDCSCGRAEMEMSGGVSNTNGGAAGPLPVVSVGDVDDALTSACGNCSKGDAFRCGGCPFLGKPAFEKGQEKTIMLLDLDSQQDD
Sbjct:    6 PPLSFAPAPAGSKALVVCRRDSEEASSAQQWASRSRSDGTSVSVCPPGHLESHARANAGAYDTIVVEEAGEGAVLGQVVKLLKAGGNINVAASSQGGEA-AAAALKRALTFAGFLNVAANPEDPRVLSGERAAWETGASAPVRLSFGASKNDSRNGTNGNGPAAXXXXXXXNKTWKLALDXXXXXXXXXXXXXLIDEDALLESSAPVKRASETAGDGCATKRRACKDCSCGRAEMEMSGGVSNTNGGAAGPLPVVSVGDVDDALTSACGNCSKGDAFRCGGCPFLGKPAFEKGQEKTIMLLDLDSQQDD 313          
BLAST of mRNA_Ecto-sp9_F_contig1097.846.1 vs.
Match: Uncharacterized (protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KDK2_9PHAE)

HSP 1 Score: 151 bits (381), Expect = 1.440e-39
Identity = 111/139 (79.86%), Postives = 114/139 (82.01%), Query Frame = 1
Query:  226 LGQVVKLLKAGGNVNVAASSQGGEADAAAALKRALTFAGFLNVAANPEDPGVLSGERAAWETGASAPVRLSFGASKNGSRNGTNGNGPAAXXXXXXXNKTWKLALDXXXXXXXXXXXXXLIDEDALLESSAPVKRASET 642
            + +VVKLLKAGGNVNVAAS +GGE  AAAALKRALTFAGF        DP VLS ERAAWETGASAPVRLSFGASKNGSRNGTNGNGP  XXXXXXX         XXXXXXXXXXXXXLIDEDALLESSAPVKRASET
Sbjct:    1 MAEVVKLLKAGGNVNVAASPEGGEVAAAAALKRALTFAGFXXXXXXXXDPRVLSAERAAWETGASAPVRLSFGASKNGSRNGTNGNGPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLIDEDALLESSAPVKRASET 139          
BLAST of mRNA_Ecto-sp9_F_contig1097.846.1 vs.
Match: Anamorsin (homolog n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CCA2_9STRA)

HSP 1 Score: 131 bits (330), Expect = 4.540e-31
Identity = 112/314 (35.67%), Postives = 156/314 (49.68%), Query Frame = 1
Query:   16 LAPAPAGSKALVVCRRGSEEASAAQQWASRSRSDGATVSVCPPGHLESHARANAGAYDTIVVEEAG---EGAVLGQVVKLLKAGGNVNVAASSQGGEADAAAALKRALTFAGFLNVAANPEDPGVLSGERAAWETGASAPVRLSFGASKNGSRNGTNGNGPAAXXXXXXXNKT---WKLALDXXXXXXXXXXXXXLIDEDALLE--SSAPVKRASETAGDG-CATKRRACKDCSCGRAEMEMSGGVSNTNGGAAGPLPVVSVGDVDDALTSACGNCSKGDAFRCGGCPFLGKPAFEKGQEKTIMLLDLDSQQDD 930
            LAP  AG KA+VV    S +     +W S + S   +  V P       A A     +++++E+     + A+LG+ +  L +GG + V  S  G E+     +   L  +GF++    PE    +   + AWE GASA ++    A          GNG  +             WK+AL+             L+DEDALLE     P+KRA+  A  G C+TK+RACK+CSCGRAE+E +G        A  P P       D   +SACGNC +GDAFRC GCP+LG PAF+KGQEK + L  LD+Q D+
Sbjct:   11 LAPLTAGHKAIVVSE--SADGGKLSEWCSNNDS---SFVVSP------QAAAGVKNVNSVIIEDPLLLLDDALLGRALGALASGGRLLVLGS--GSES-----VSSKLVLSGFVDARVTPEG---VEAFKPAWEAGASAQLKFKPKA----------GNGAVSKPQQQQKAAVATAWKVALNDLAEDDFAESDGGLVDEDALLEVAGDVPLKRATPAADAGDCSTKKRACKNCSCGRAELEAAG--------APAPPPE------DGPGSSACGNCYRGDAFRCSGCPYLGLPAFDKGQEKVV-LSSLDTQMDE 278          
BLAST of mRNA_Ecto-sp9_F_contig1097.846.1 vs.
Match: Anamorsin (homolog n=3 Tax=Monodopsidaceae TaxID=425072 RepID=W7TKP2_9STRA)

HSP 1 Score: 127 bits (320), Expect = 1.580e-29
Identity = 88/218 (40.37%), Postives = 112/218 (51.38%), Query Frame = 1
Query:  283 SQGGEADAAAALKRALTFAGFLNVAANP---EDPGVLSGERAAWETGASAPVRLSFGASKNGSRNGTNGNGPAAXXXXXXXNKTWKLALDXXXXXXXXXXXXXLIDEDALLESSAPV-----KRASETAGDGCATKRRACKDCSCGRAEMEMS-GGVSNTNGGAAGPLPVVSVGDVDDALTSACGNCSKGDAFRCGGCPFLGKPAFEKGQEKTIMLLD 909
            ++GG+ +  A +K  L  AGF++V   P        L   +  WE GA+A V L                G +A         TW+L                LID D+LLE +  +     KRA    G GC TK+RACK+CSCGRAE E   GGV+         LPV+S  +++ A  S+CGNC KGDAFRCGGCPFLGKPAFE GQEK ++ LD
Sbjct:   94 AKGGKEETCAGMKMQLLLAGFVDVEVLPASASSSASLIAHKPQWEVGAAASVSLPVSLPXXXXXXXXXXTGQSAA--------TWRLTDVDGEGGEEGGAEGELIDPDSLLEDAEVMAGLAAKRAEREQGQGCETKKRACKNCSCGRAEQEEGRGGVA---------LPVMSEEELE-ASVSSCGNCYKGDAFRCGGCPFLGKPAFEPGQEKLVLKLD 293          
BLAST of mRNA_Ecto-sp9_F_contig1097.846.1 vs.
Match: Anamorsin (homolog n=2 Tax=Albugo candida TaxID=65357 RepID=A0A024GTM7_9STRA)

HSP 1 Score: 104 bits (260), Expect = 1.820e-21
Identity = 58/115 (50.43%), Postives = 77/115 (66.96%), Query Frame = 1
Query:  586 IDEDALLESSAPVKRASET-AGDGCATKRRACKDCSCGRAEMEMSGGVSNTNGGAAGPLPVVSVGDVDDALTSACGNCSKGDAFRCGGCPFLGKPAFEKGQEKTIMLLDLDSQQD 927
            IDED+LL+++  V++A++   G     KRRACK+C+CGRAE E++ G            PVVS  ++   + S+CGNC KGDAFRCGGCPFLGKPAF+ G EK +  L+LDS  D
Sbjct:  179 IDEDSLLDNTEEVRKAAKNDCGVSANGKRRACKNCTCGRAETEIASG------------PVVSDQELSQ-MVSSCGNCFKGDAFRCGGCPFLGKPAFKPGMEKVV--LNLDSSDD 278          
BLAST of mRNA_Ecto-sp9_F_contig1097.846.1 vs.
Match: Anamorsin (homolog n=1 Tax=Albugo laibachii Nc14 TaxID=890382 RepID=F0WJB8_9STRA)

HSP 1 Score: 99.0 bits (245), Expect = 1.850e-19
Identity = 58/115 (50.43%), Postives = 75/115 (65.22%), Query Frame = 1
Query:  586 IDEDALLESSAPVKRASET-AGDGCATKRRACKDCSCGRAEMEMSGGVSNTNGGAAGPLPVVSVGDVDDALTSACGNCSKGDAFRCGGCPFLGKPAFEKGQEKTIMLLDLDSQQD 927
            IDED+LL+ +  V++A++   G     KRRACK+C+CGRAE E +   SN         PVVS  ++   + S+CGNC KGDAFRCG CPFLGKPAF+ G EK +  L+LDS  D
Sbjct:  179 IDEDSLLDDTEEVRKAAKNDCGVSANGKRRACKNCTCGRAETENA---SN---------PVVSDQELSQ-MVSSCGNCFKGDAFRCGACPFLGKPAFKPGMEKVV--LNLDSSDD 278          
BLAST of mRNA_Ecto-sp9_F_contig1097.846.1 vs.
Match: Uncharacterized (protein n=1 Tax=Pythium oligandrum TaxID=41045 RepID=A0A8K1C8D4_PYTOL)

HSP 1 Score: 96.7 bits (239), Expect = 1.120e-18
Identity = 81/240 (33.75%), Postives = 116/240 (48.33%), Query Frame = 1
Query:  226 LGQVVKLLKAGGNVNVAASSQGGEADAAAALKRALTFAGFLNVAANPEDPGV--------LSGERAAWETGASAPVRLSFGASKNGSRNGTNGNGPAAXXXXXXXNKTWKLALDXXXXXXXXXXXXXLIDEDALLESSAPVKRAS----ETAGDGCATKRRACKDCSCGRAEMEMSGGVSNTNGGAAGPLPVVSVGDVDDALTSACGNCSKGDAFRCGGCPFLGKPAFEKGQEKTIMLLD 909
            LG +   +KAGG +++  +    E+  +  +   L  AGF+   A+ E  G          + ++ A+E+G+SA + L+         NGT    P          K WK+  D             +IDED LL+ +  V +A+    E   DG   KRRACK+C+CGR + E                PVVS  ++   + S+CGNC KGDAFRCG CPFLGKPAF+ G EK ++ LD
Sbjct:   74 LGVLTPHIKAGGTLHLYVADVDDESKNSVLM--GLMIAGFVEAEADAEISGYPGLPTARRFTSKKPAFESGSSAAIPLNS--------NGTKTAQPL---------KKWKVVSDDFDGEDDDD----VIDEDTLLDDTDEVLQAAKDDCEVGKDG---KRRACKNCTCGRKDEEDK--------------PVVSDAELTQ-MVSSCGNCFKGDAFRCGSCPFLGKPAFKPGMEKVMLNLD 272          
BLAST of mRNA_Ecto-sp9_F_contig1097.846.1 vs.
Match: Anamorsin (homolog n=1 Tax=Monosiga brevicollis TaxID=81824 RepID=DRE2_MONBE)

HSP 1 Score: 94.7 bits (234), Expect = 5.640e-18
Identity = 70/198 (35.35%), Postives = 97/198 (48.99%), Query Frame = 1
Query:  313 ALKRALTFAGFLNVAANPEDPGVLS-GERAAWETGASAPVRLSFGASKNGSRNGTNGNGPAAXXXXXXXNKTWKLALDXXXXXXXXXXXXX-LID-EDALLESSAPVKRASETAGDGCATKRRACKDCSCGRAEMEMSGGVSNTNGGAAGPLPVVSVGDVDDALTSACGNCSKGDAFRCGGCPFLGKPAFEKGQEKTI 897
            AL+ ALT  GF+NV  +  +  + +  ++  +E GA+AP++LSF   K      +    PAA        + W +A D              L+D ED  L ++AP     E    G   KRRACK+C+CGRA+ E       T     GPLP            S+CGNC  GDAFRC  CP+LG PAF+ G++ T+
Sbjct:  103 ALRSALTMGGFVNVQVSTSEHALEAHADKPVYEVGAAAPLKLSFAKKKQ-----SGAAAPAAQVA-----EVWTIATDDFDDDDLLENDGDELLDAEDLALATTAPEGDDCEVGAGG---KRRACKNCTCGRADAEAEQAAKPT---LTGPLPA-----------SSCGNCYLGDAFRCASCPYLGMPAFKPGEKVTL 273          
BLAST of mRNA_Ecto-sp9_F_contig1097.846.1 vs.
Match: Anamorsin (homolog n=2 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2V0U0_9STRA)

HSP 1 Score: 94.0 bits (232), Expect = 6.560e-18
Identity = 74/180 (41.11%), Postives = 94/180 (52.22%), Query Frame = 1
Query:  388 GERAAWETGASAPVRLSFGASKNGSRNGTNGNGPAAXXXXXXXNKTWKLALDXXXXXXXXXXXXXLIDEDALLESSAPVKRASETAG----DGCATKRRACKDCSCGRAEMEMSGGVSNTNGGAAGPLPVVSVGDVDDALTSACGNCSKGDAFRCGGCPFLGKPAFEKGQEKTIMLLDLD 915
            G +  WE GASA V ++ G                 XXXXX    TWK+A               L+DED LL++ AP+     T G    +G    +RACK+C+CG AE E++GG      GAA P PV  V     A +SACGNC KGDAFRC  CPF GKP+F+ G+EK ++ L  D
Sbjct:  110 GAKPDWEVGASAAVSVNLG-----------------XXXXXTSASTWKIAA-------LNEDGDDLVDEDDLLDA-APLPANISTGGGCGDEGSTKPKRACKNCTCGLAE-ELAGGGGE---GAAPPAPVDPV-----AKSSACGNCFKGDAFRCASCPFRGKPSFKPGEEKLVLDLGSD 255          
BLAST of mRNA_Ecto-sp9_F_contig1097.846.1 vs.
Match: Anamorsin (homolog n=1 Tax=Pythium brassicum TaxID=1485010 RepID=A0A5D6XQE7_9STRA)

HSP 1 Score: 94.4 bits (233), Expect = 8.200e-18
Identity = 107/313 (34.19%), Postives = 157/313 (50.16%), Query Frame = 1
Query:   31 AGSKALVVCRRGSEEASAAQQWASRSRSDGATVSVCPPGHLESHARANA---GAYDTIV-VEEAGEGAV--LGQVVKLLKAGGNVNVAASSQGGEADAAAALKRALTFAGFLNVAAN---------PEDPGV--LSGERAAWETGASAPVRLSFGASKNGSRNGTNGNGPAAXXXXXXXNKTWKLALDXXXXXXXXXXXXXLIDEDALLESSAPVKRASET-AGDGCATKRRACKDCSCGRAEMEMSGGVSNTNGGAAGPLPVVSVGDVDDALTSACGNCSKGDAFRCGGCPFLGKPAFEKGQEKTIMLLDLD 915
            AG+ A+V  + G+   +AA +   R +   A+V++ P     S A+  A   G++D +V   EAG+     L  +  L+KAGG ++V  ++     D  +++  AL  AGF+  A +         PE       S ++ ++ETGA+  +                      XXXXXXX K W +  D       XXXXXX+IDED LL+ +  V +A+++  G     K+RACK+C+CG  + E                PVVS  ++   + S CGNC KGDAFRCG CPFLGKPAF+ G EK ++ LD D
Sbjct:    6 AGAVAIVTRQTGAAAEAAAVELR-RQQPKVASVALLPVAVGASVAQTAAVASGSFDAVVSFNEAGDDLTTELQALSPLVKAGGALHVFVANA--SEDTKSSILMALMIAGFVEAADSDAADAASFFPEAARARCFSSKKPSFETGAALSLSXXX----------------XXXXXXXXXXKKWTVLADEFDDDGDXXXXXXIIDEDTLLDDTDEVLKAAKSDCGPTVGGKKRACKNCTCGLKDEEDK--------------PVVSDTELSQ-MVSGCGNCFKGDAFRCGSCPFLGKPAFKPGMEKVLLNLDAD 284          
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp9_F_contig1097.846.1 vs.
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Ectocarpus species9 EcSCA_722f female vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
Anamorsin8.740e-18397.09homolog n=1 Tax=Ectocarpus siliculosus TaxID=2880 ... [more]
Uncharacterized1.440e-3979.86protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=... [more]
Anamorsin4.540e-3135.67homolog n=1 Tax=Tribonema minus TaxID=303371 RepID... [more]
Anamorsin1.580e-2940.37homolog n=3 Tax=Monodopsidaceae TaxID=425072 RepID... [more]
Anamorsin1.820e-2150.43homolog n=2 Tax=Albugo candida TaxID=65357 RepID=A... [more]
Anamorsin1.850e-1950.43homolog n=1 Tax=Albugo laibachii Nc14 TaxID=890382... [more]
Uncharacterized1.120e-1833.75protein n=1 Tax=Pythium oligandrum TaxID=41045 Rep... [more]
Anamorsin5.640e-1835.35homolog n=1 Tax=Monosiga brevicollis TaxID=81824 R... [more]
Anamorsin6.560e-1841.11homolog n=2 Tax=Fibrocapsa japonica TaxID=94617 Re... [more]
Anamorsin8.200e-1834.19homolog n=1 Tax=Pythium brassicum TaxID=1485010 Re... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp9_F_contig1097contigEcto-sp9_F_contig1097:23380..26882 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 of Ectocarpus species9 EcSCA_722f female vs UniRef902022-09-19
OGS1.0 of Ectocarpus species9 EcSCA_722f female2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score524.6
Seed ortholog evalue3.1e-146
Seed eggNOG ortholog2880.D7FUN0
Preferred nameDRE2
GOsGO:0000003,GO:0001505,GO:0002064,GO:0002065,GO:0002066,GO:0002376,GO:0002520,GO:0003006,GO:0003674,GO:0003824,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005634,GO:0005654,GO:0005730,GO:0005737,GO:0005739,GO:0005740,GO:0005758,GO:0005829,GO:0006091,GO:0006790,GO:0007275,GO:0007276,GO:0007281,GO:0007292,GO:0008150,GO:0008152,GO:0009055,GO:0009888,GO:0009889,GO:0009890,GO:0009892,GO:0009987,GO:0010941,GO:0016043,GO:0016226,GO:0016491,GO:0019222,GO:0019953,GO:0022412,GO:0022414,GO:0022607,GO:0022900,GO:0030097,GO:0030154,GO:0030707,GO:0030855,GO:0031163,GO:0031323,GO:0031324,GO:0031326,GO:0031327,GO:0031967,GO:0031970,GO:0031974,GO:0031975,GO:0031981,GO:0032501,GO:0032502,GO:0032504,GO:0042981,GO:0043066,GO:0043067,GO:0043069,GO:0043226,GO:0043227,GO:0043228,GO:0043229,GO:0043231,GO:0043232,GO:0043233,GO:0044085,GO:0044237,GO:0044422,GO:0044424,GO:0044428,GO:0044429,GO:0044444,GO:0044446,GO:0044464,GO:0044572,GO:0044703,GO:0045019,GO:0045428,GO:0048037,GO:0048468,GO:0048477,GO:0048513,GO:0048519,GO:0048523,GO:0048534,GO:0048583,GO:0048585,GO:0048609,GO:0048731,GO:0048856,GO:0048869,GO:0050789,GO:0050794,GO:0051171,GO:0051172,GO:0051186,GO:0051536,GO:0051537,GO:0051539,GO:0051540,GO:0051704,GO:0055114,GO:0060429,GO:0060548,GO:0065007,GO:0065008,GO:0070013,GO:0071840,GO:0080134,GO:0080135,GO:1900407,GO:1900408,GO:1901031,GO:1901032,GO:1901298,GO:1901299,GO:1902882,GO:1902883,GO:1903201,GO:1903202,GO:1903205,GO:1903206,GO:1903426,GO:1903427,GO:1904406,GO:2000377,GO:2000378,GO:2001023,GO:2001024,GO:2001038,GO:2001039
EggNOG free text desc.metallo-sulfur cluster assembly
EggNOG OGsCOG5636@1,KOG4020@2759
COG Functional cat.E
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
Hectar predicted targeting categoryother localisation
Ec32 ortholog descriptionAnamorsin
Ec32 orthologEc-26_002090.1
Exons4
Model size1605
Cds size933
Stop1
Start0
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp9_F_contig1097.846.1prot_Ecto-sp9_F_contig1097.846.1Ectocarpus species9 EcSCA_722f femalepolypeptideEcto-sp9_F_contig1097 24050..26882 -


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622928329.6810086-UTR-Ecto-sp9_F_contig1097:23379..240491622928329.6810086-UTR-Ecto-sp9_F_contig1097:23379..24049Ectocarpus species9 EcSCA_722f femaleUTREcto-sp9_F_contig1097 23380..24049 -
1692277835.236788-UTR-Ecto-sp9_F_contig1097:23379..240491692277835.236788-UTR-Ecto-sp9_F_contig1097:23379..24049Ectocarpus species9 EcSCA_722f femaleUTREcto-sp9_F_contig1097 23380..24049 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622928329.6936681-CDS-Ecto-sp9_F_contig1097:24049..241601622928329.6936681-CDS-Ecto-sp9_F_contig1097:24049..24160Ectocarpus species9 EcSCA_722f femaleCDSEcto-sp9_F_contig1097 24050..24160 -
1692277835.2485323-CDS-Ecto-sp9_F_contig1097:24049..241601692277835.2485323-CDS-Ecto-sp9_F_contig1097:24049..24160Ectocarpus species9 EcSCA_722f femaleCDSEcto-sp9_F_contig1097 24050..24160 -
1622928329.7048545-CDS-Ecto-sp9_F_contig1097:24946..251261622928329.7048545-CDS-Ecto-sp9_F_contig1097:24946..25126Ectocarpus species9 EcSCA_722f femaleCDSEcto-sp9_F_contig1097 24947..25126 -
1692277835.2681775-CDS-Ecto-sp9_F_contig1097:24946..251261692277835.2681775-CDS-Ecto-sp9_F_contig1097:24946..25126Ectocarpus species9 EcSCA_722f femaleCDSEcto-sp9_F_contig1097 24947..25126 -
1622928329.7192726-CDS-Ecto-sp9_F_contig1097:25927..263351622928329.7192726-CDS-Ecto-sp9_F_contig1097:25927..26335Ectocarpus species9 EcSCA_722f femaleCDSEcto-sp9_F_contig1097 25928..26335 -
1692277835.2756388-CDS-Ecto-sp9_F_contig1097:25927..263351692277835.2756388-CDS-Ecto-sp9_F_contig1097:25927..26335Ectocarpus species9 EcSCA_722f femaleCDSEcto-sp9_F_contig1097 25928..26335 -
1622928329.7293904-CDS-Ecto-sp9_F_contig1097:26648..268821622928329.7293904-CDS-Ecto-sp9_F_contig1097:26648..26882Ectocarpus species9 EcSCA_722f femaleCDSEcto-sp9_F_contig1097 26649..26882 -
1692277835.2833388-CDS-Ecto-sp9_F_contig1097:26648..268821692277835.2833388-CDS-Ecto-sp9_F_contig1097:26648..26882Ectocarpus species9 EcSCA_722f femaleCDSEcto-sp9_F_contig1097 26649..26882 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_Ecto-sp9_F_contig1097.846.1

>prot_Ecto-sp9_F_contig1097.846.1 ID=prot_Ecto-sp9_F_contig1097.846.1|Name=mRNA_Ecto-sp9_F_contig1097.846.1|organism=Ectocarpus species9 EcSCA_722f female|type=polypeptide|length=311bp
PPPLSLAPAPAGSKALVVCRRGSEEASAAQQWASRSRSDGATVSVCPPGH
LESHARANAGAYDTIVVEEAGEGAVLGQVVKLLKAGGNVNVAASSQGGEA
DAAAALKRALTFAGFLNVAANPEDPGVLSGERAAWETGASAPVRLSFGAS
KNGSRNGTNGNGPAAAATAAAANKTWKLALDDDEGGAGGAEDDDLIDEDA
LLESSAPVKRASETAGDGCATKRRACKDCSCGRAEMEMSGGVSNTNGGAA
GPLPVVSVGDVDDALTSACGNCSKGDAFRCGGCPFLGKPAFEKGQEKTIM
LLDLDSQQDD*
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mRNA from alignment at Ecto-sp9_F_contig1097:23380..26882-

Legend: polypeptideCDSUTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_Ecto-sp9_F_contig1097.846.1 ID=mRNA_Ecto-sp9_F_contig1097.846.1|Name=mRNA_Ecto-sp9_F_contig1097.846.1|organism=Ectocarpus species9 EcSCA_722f female|type=mRNA|length=3503bp|location=Sequence derived from alignment at Ecto-sp9_F_contig1097:23380..26882- (Ectocarpus species9 EcSCA_722f female)
CCGCCGCCGCTGTCCCTTGCGCCGGCTCCGGCGGGCTCCAAGGCCCTCGT GGTCTGCAGAAGGGGTTCCGAGGAGGCGTCGGCGGCGCAGCAGTGGGCGT CGCGATCCAGGAGCGACGGCGCCACCGTGAGCGTGTGCCCCCCGGGCCAC CTTGAGTCTCACGCCCGGGCGAACGCGGGGGCGTACGACACGATCGTGGT GGAGGAGGCCGGGGAGGGAGCTGTGCTGGGACAGGCGAGAGACGCGGGGG GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGTGGGTGG GGAGATGGGGCGGGAGCAGGTTCATTGGATTTAAAATCCTAGTCGACACT TACTTGTTGTTGAGAAGTGTTTTATGATGGAGACTGCCGCTGTGTTGCGA TGGCAGAGGCATGGGTGTATTCCGGCGCTACTGCTGCTGCTGCTGCTCAA CGACGGCCCTTCCCGCGGCGGCGTTGACTCCACAACCAGTTTCGTTTGTC TCCTCCCCCTCCCCCCCTCCCCAAAAAACAACTCCCGGGGTATTCAGGTC GTGAAGCTGCTCAAGGCTGGTGGCAACGTTAACGTGGCAGCCTCCTCCCA AGGCGGCGAAGCCGACGCCGCCGCCGCTTTGAAACGCGCCCTCACCTTTG CGGGATTCCTGAACGTCGCTGCCAACCCGGAAGACCCCGGTGTCCTCAGT GGGGAGCGGGCGGCATGGGAGACGGGAGCATCGGCGCCGGTTCGCCTCTC GTTCGGCGCGTCGAAGAACGGCTCGCGGAACGGTACCAACGGGAACGGGC CAGCGGCGGCGGCGACGGCGGCAGCGGCGAACAAGACGTGGAAGCTGGCG TTGGATGATGACGAGGGAGGGGCTGGGGGTGCGGAGGATGACGATCTTAT CGACGAGGACGCTCTACTGGAGAGCTCGGCCCCCGTTAAGCGGGCGAGCG AGACGGTGAGCAGAATTATTATTCCGTCCATCTTGGCGAAACGCTCGGCC GTTGTAGATCGAGTTGGCCGGCTTCTGTTTGCCTCCGCGGATGTTGGTCG TGCCACTAGGTTAGTTGATAGCCTGGTGTTTTCTTTACCCACTCAAAGAT GTTGCCATGTGCAAAGGCTTCTCTCCGGTCGCGAGTTTGTCGCGCAAGCT TTGATACAGGTGGCAAGTGATGACTTGCGTCGATCTCGCGAATAATAAAG ATCTCTTGTATATACATATTCAAGTGAGCGCTTGCGCCCACACTACCCAG GTACTTGAATGAACGCCACTCGCTCGAGGGGGAGAGATTGAGATGTGTGT TGGTTTCGTTGTCTGGAGCTGTTCTTGTCGTGCAGCTCTTTGCTCATATA GTAGTTGTTGTCGCCATTTGAACACTTCCCTCGCCTCTGAACTCTTACGC ATACATGCTCTATGTGCGTGCTCCTCCCATATATCAGCCGCTTTGACATA TCTTGGGATTTAGGCGTGTGGAATGCTGACGACAGTCCGATATCAGTTCT CGCAAGAGGTGTTGGTTGAAAATGTTTCAAAATAACAACGAACAATTTTT TCGAAAAAAAAAACTCTCTTGGAAAGAAATAATGTGTCCCTGGGGTAATT CGAGTTGGCCCGCGCCAGCGGTTGTGGTGCCTAAGCGGTAGTGACCACTG ACGAACGTAGACAATCAGAGAACGTCAATCGTTCGCTATTCCACTACAAC TCCACGCTCTCCCCACTCCACCATTTACCGTCTGCTTGCGCGTACATCCC TTACAGGCCGGCGACGGCTGCGCCACCAAGCGACGAGCGTGCAAGGACTG CTCCTGCGGCCGTGCCGAGATGGAGATGAGCGGGGGGGTCAGCAACACCA ACGGCGGCGCCGCGGGGCCCCTACCGGTGGTGTCCGTCGGGGACGTAGAC GATGCCCTCACGTCCGCCTGCGGCAACTGCTCCAAGGTTGGTTTTTGCAG AAAGTTTGGAAACGTCGAAATGGCGAGGCCCAAACACGCTGTGCACTTCC AGCCTTTCTCCATCTACTATTGCTTCGAACTATTTCTTGTGGCGCGCCCA ACCGGTGTGTACAGCGTCTGTTTTTTTTTTTCCAAGAGGTGTGACGTCTT CTTCGGACCAGAATGCTTCGCAGCCGTACTGCGATCGTTTCGTCGAGATT TGCGCCAACGTTTGTGTCCATGTTGGTTCAGCGCGCAGACCCCGTCGCCG TCCTCTATCTATCTGCAGGCTGCCGCCGTTCCTAGCTTCATGCAGTTATT TAGCAAAGTTCTCGCTTGCGCTGGCAGCATTATCGTCGCCGGAGTTCGGT TTGGGTGTGTCCGTCACTACAATCACTCGCGATTCTCAAGTGTTTTTTCA GCCCTGGGCGTGGCTGAGACGCTCGTATTTGCAAGACAAACAATCTGTCT CGTCACGGACAACACCAGCTCTCCCCCCCGCGGGCCGCGCGCACACCGGC GAATCTCAATCTCCTTCACATCCTACAGACCTCTCGATATACCAACACAC ACAAACTTTGCTTCACGCACCGTTCTTTTTTTCTTTTGTGCGCGCGCCCT CCCTTTTTGGTGATGTGCTAGCGTCGTCCGGTGAGAACCTGGTGTGCTAG TCCCGGCTTTGTAGCGATGCGAGGCCAATGCTCTAGCGACTACGGCATGC ACGGCTATGAGTACGGCCCCCTCTTATTTGAGGACACCCCCCCCCCCCCC TTTATTTTTTTCTTGTCCGCAGGGCGACGCGTTCCGATGCGGGGGTTGTC CGTTCCTCGGAAAGCCAGCCTTCGAAAAGGGGCAGGAGAAGACCATCATG CTCTTGGATCTCGACTCCCAGCAGGACGACTGATGTACCTGGGCCTGGGT CTAGTTTTTTGTGTCGTGTGGGCGTTGTCACCACCAATGAACGTGGCGTT GATGGGATTCTCCGTATTGGCGTTGGGTGCTTGTCTTCCCATTTTGAGAA TTAACTTGCCATTAGGTCGTTTCAATGTCTTAATCCTCAAAAGAGTTCTC GTGTTTGTATGTGGATGGATGCCGTGTAGGGGGCTGACCCGCGGTGGCCG GGCTGGGGGCGCATCGACCGGAGTTGATTTTGAAGTTTGATTCACGTGGT TCTTGAAATCTGCTCCTTGTTTTCCGTCCATCTTTGTGCGCACTGCAACG GTTGGATTCTCCACTCTGTTGGATGTTGGTTGTTGTCAAGTGGTTCGGTT TTCTGGGGTGATCGGATATCGGGTTGAACTACACATATTCCTGCTGTACA ACGAAGAGCTTGTGATTCCTGTGATAGCTAAATGTTGGTGCTGTTTTTCT CACCAGGTTCTTTGGCGGCACCTGTTGAACATGGAAAACTTGTCGGGCGC GGTTTTGGTTCTGACCCGTTCCTGGCAAGTACAGAATGAACCATTCGAAC GTAGTCGCTTGCAGAACGAAAGCCAGAACGCTTGCAAGGGGAACACAGCC AGACGTCCATGTTGTTGGTGTGAGAGATCTTGCGCTTCCGCGCTGCACAT GGC
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Coding sequence (CDS) from alignment at Ecto-sp9_F_contig1097:23380..26882-

>mRNA_Ecto-sp9_F_contig1097.846.1 ID=mRNA_Ecto-sp9_F_contig1097.846.1|Name=mRNA_Ecto-sp9_F_contig1097.846.1|organism=Ectocarpus species9 EcSCA_722f female|type=CDS|length=1866bp|location=Sequence derived from alignment at Ecto-sp9_F_contig1097:23380..26882- (Ectocarpus species9 EcSCA_722f female)
CCGCCGCCGCTGTCCCTTGCGCCGGCTCCGGCGGGCTCCAAGGCCCTCGT
GGTCTGCAGAAGGGGTTCCGAGGAGGCGTCGGCGGCGCAGCAGTGGGCGT
CGCGATCCAGGAGCGACGGCGCCACCGTGAGCGTGTGCCCCCCGGGCCAC
CTTGAGTCTCACGCCCGGGCGAACGCGGGGGCGTACGACACGATCGTGGT
GGAGGAGGCCGGGGAGGGAGCTGTGCTGGGACAGCCGCCGCCGCTGTCCC
TTGCGCCGGCTCCGGCGGGCTCCAAGGCCCTCGTGGTCTGCAGAAGGGGT
TCCGAGGAGGCGTCGGCGGCGCAGCAGTGGGCGTCGCGATCCAGGAGCGA
CGGCGCCACCGTGAGCGTGTGCCCCCCGGGCCACCTTGAGTCTCACGCCC
GGGCGAACGCGGGGGCGTACGACACGATCGTGGTGGAGGAGGCCGGGGAG
GGAGCTGTGCTGGGACAGGTCGTGAAGCTGCTCAAGGCTGGTGGCAACGT
TAACGTGGCAGCCTCCTCCCAAGGCGGCGAAGCCGACGCCGCCGCCGCTT
TGAAACGCGCCCTCACCTTTGCGGGATTCCTGAACGTCGCTGCCAACCCG
GAAGACCCCGGTGTCCTCAGTGGGGAGCGGGCGGCATGGGAGACGGGAGC
ATCGGCGCCGGTTCGCCTCTCGTTCGGCGCGTCGAAGAACGGCTCGCGGA
ACGGTACCAACGGGAACGGGCCAGCGGCGGCGGCGACGGCGGCAGCGGCG
AACAAGACGTGGAAGCTGGCGTTGGATGATGACGAGGGAGGGGCTGGGGG
TGCGGAGGATGACGATCTTATCGACGAGGACGCTCTACTGGAGAGCTCGG
CCCCCGTTAAGCGGGCGAGCGAGACGGTCGTGAAGCTGCTCAAGGCTGGT
GGCAACGTTAACGTGGCAGCCTCCTCCCAAGGCGGCGAAGCCGACGCCGC
CGCCGCTTTGAAACGCGCCCTCACCTTTGCGGGATTCCTGAACGTCGCTG
CCAACCCGGAAGACCCCGGTGTCCTCAGTGGGGAGCGGGCGGCATGGGAG
ACGGGAGCATCGGCGCCGGTTCGCCTCTCGTTCGGCGCGTCGAAGAACGG
CTCGCGGAACGGTACCAACGGGAACGGGCCAGCGGCGGCGGCGACGGCGG
CAGCGGCGAACAAGACGTGGAAGCTGGCGTTGGATGATGACGAGGGAGGG
GCTGGGGGTGCGGAGGATGACGATCTTATCGACGAGGACGCTCTACTGGA
GAGCTCGGCCCCCGTTAAGCGGGCGAGCGAGACGGCCGGCGACGGCTGCG
CCACCAAGCGACGAGCGTGCAAGGACTGCTCCTGCGGCCGTGCCGAGATG
GAGATGAGCGGGGGGGTCAGCAACACCAACGGCGGCGCCGCGGGGCCCCT
ACCGGTGGTGTCCGTCGGGGACGTAGACGATGCCCTCACGTCCGCCTGCG
GCAACTGCTCCAAGGCCGGCGACGGCTGCGCCACCAAGCGACGAGCGTGC
AAGGACTGCTCCTGCGGCCGTGCCGAGATGGAGATGAGCGGGGGGGTCAG
CAACACCAACGGCGGCGCCGCGGGGCCCCTACCGGTGGTGTCCGTCGGGG
ACGTAGACGATGCCCTCACGTCCGCCTGCGGCAACTGCTCCAAGGGCGAC
GCGTTCCGATGCGGGGGTTGTCCGTTCCTCGGAAAGCCAGCCTTCGAAAA
GGGGCAGGAGAAGACCATCATGCTCTTGGATCTCGACTCCCAGCAGGACG
ACTGAGGCGACGCGTTCCGATGCGGGGGTTGTCCGTTCCTCGGAAAGCCA
GCCTTCGAAAAGGGGCAGGAGAAGACCATCATGCTCTTGGATCTCGACTC
CCAGCAGGACGACTGA
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