mRNA_Ecto-sp9_F_contig1095.829.1 (mRNA) Ectocarpus species9 EcSCA_722f female

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_Ecto-sp9_F_contig1095.829.1
Unique NamemRNA_Ecto-sp9_F_contig1095.829.1
TypemRNA
OrganismEctocarpus species9 EcSCA_722f female (Ectocarpus species9 EcSCA_722f female)
Homology
BLAST of mRNA_Ecto-sp9_F_contig1095.829.1 vs.
Match: 5'-nucleotidase (n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JI70_9PHAE)

HSP 1 Score: 570 bits (1470), Expect = 4.770e-203
Identity = 281/300 (93.67%), Postives = 290/300 (96.67%), Query Frame = 1
Query:    1 MPAVEENGGGSKAENSPRVLFRDAEDFERKRQRIVAGGVDHLQIISDFDFTLTKFWVNGKRGDSCHAVIDESGLLGEGFHKRTSELRDHYYPLEVAPDLSPEMRVEMMVEWVTKAHEAMVAAGITKDILSAAVSKANLLFRPGHGELLRWVDKHGVPLLMFSAGIADVLEEAFRQHSAEPLPSTSRVISNRMAFDEDGNMTGFVGECFHVFNKHASSSVVKPYFETNEMRCRSSVLLLGDSLGDLNMAKGLSAEENLTVGFLNDKVEERTDAYLKAYDVVILGDGGFDFVLELLEEVASK 900
            MPAVE+NGGGSKA+NSPRVLFRDAEDFERK QRIVAGGVD LQIISDFDFTLTKFWVNGKRGDSCHAVID SGLLGEGFHKRT ELR+HYYPLEVAPDLSPEMR+EMMVEWVTKAH+AMVAAGITKDILSAAVSKANLLFRPGHGELLRWVDKHGVP LMFSAGIADVLEEAFRQHSAEPLPSTSRVISNRMAFDEDGNMTGFVGECFHVFNKHAS+S VKPYFET+EMRCRS+VLLLGDSLGDLNMAKGL AEE LTVGFLNDKVEER DAYLKAYDVVILGDG FDFVLELLE+VASK
Sbjct:    1 MPAVEKNGGGSKADNSPRVLFRDAEDFERKWQRIVAGGVDRLQIISDFDFTLTKFWVNGKRGDSCHAVIDGSGLLGEGFHKRTWELRNHYYPLEVAPDLSPEMRLEMMVEWVTKAHDAMVAAGITKDILSAAVSKANLLFRPGHGELLRWVDKHGVPFLMFSAGIADVLEEAFRQHSAEPLPSTSRVISNRMAFDEDGNMTGFVGECFHVFNKHASASAVKPYFETDEMRCRSNVLLLGDSLGDLNMAKGLRAEETLTVGFLNDKVEERADAYLKAYDVVILGDGSFDFVLELLEQVASK 300          
BLAST of mRNA_Ecto-sp9_F_contig1095.829.1 vs.
Match: 5'-nucleotidase (n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LDF4_ECTSI)

HSP 1 Score: 505 bits (1301), Expect = 7.160e-178
Identity = 247/255 (96.86%), Postives = 253/255 (99.22%), Query Frame = 1
Query:  136 SDFDFTLTKFWVNGKRGDSCHAVIDESGLLGEGFHKRTSELRDHYYPLEVAPDLSPEMRVEMMVEWVTKAHEAMVAAGITKDILSAAVSKANLLFRPGHGELLRWVDKHGVPLLMFSAGIADVLEEAFRQHSAEPLPSTSRVISNRMAFDEDGNMTGFVGECFHVFNKHASSSVVKPYFETNEMRCRSSVLLLGDSLGDLNMAKGLSAEENLTVGFLNDKVEERTDAYLKAYDVVILGDGGFDFVLELLEEVASK 900
            +DFDFTLTKFWVNGKRGDSCHAVIDESGLLGEGFHKRTSELRDHYYPLEVAPDLSPEMRVEMMVEWVTKAHEAMVAAGITKDILSAAVSKANLLFRPGHGELLRWVDK+GVPLLMFSAGIADVLEEAFRQHSAEPLPSTSRV+SNRMAFDEDGNMTGFVGECFHVFNKHASSS VKPYFET+EMRCRSSVLLLGDSLGDLNMAKGLSAEE LTVGFLNDK+EERTDAYLKAYDV+ILGDGGFDFVLELLEEVASK
Sbjct:   12 TDFDFTLTKFWVNGKRGDSCHAVIDESGLLGEGFHKRTSELRDHYYPLEVAPDLSPEMRVEMMVEWVTKAHEAMVAAGITKDILSAAVSKANLLFRPGHGELLRWVDKYGVPLLMFSAGIADVLEEAFRQHSAEPLPSTSRVVSNRMAFDEDGNMTGFVGECFHVFNKHASSSAVKPYFETDEMRCRSSVLLLGDSLGDLNMAKGLSAEEILTVGFLNDKIEERTDAYLKAYDVIILGDGGFDFVLELLEEVASK 266          
BLAST of mRNA_Ecto-sp9_F_contig1095.829.1 vs.
Match: 5'-nucleotidase (n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YMP4_9STRA)

HSP 1 Score: 257 bits (657), Expect = 3.270e-80
Identity = 127/248 (51.21%), Postives = 170/248 (68.55%), Query Frame = 1
Query:  154 LTKFWVNGKRGDSCHAVIDESGLLGEGFHKRTSELRDHYYPLEVAPDLSPEMRVEMMVEWVTKAHEAMVAAGITKDILSAAVSKANLLFRPGHGELLRWVDKHGVPLLMFSAGIADVLEEAFRQHSAEPLPSTSRVISNRMAFDE-DGNMTGFVGECFHVFNKHASSSVVKPYFETNEMRCRSSVLLLGDSLGDLNMAKGLSAEENLTVGFLNDKVEERTDAYLKAYDVVILG-DGGFDFVLELLEEV 891
            L  F VNG+RG SCH  ++  GLL E +H+    L+  YYPLE+   L+ E RV  M EWV +AH+A+  AG+TK  +  AV +AN+  R  H EL   +D   +PLL+FSAG+ADVLEE  RQH++ PLP+ + VISNRM+F+  +G   GF G+ FHVFNK A + + +PYF + E++ R +VLLLGDSLGDL MA GL A+E L+VGFLND+ EER  +YL  YDVVI+G D G  + L+L+ E+
Sbjct:   23 LHSFMVNGRRGSSCHGCLEYCGLLTEEYHRTVQALKQKYYPLELDTSLTQEQRVAFMEEWVEQAHDALSQAGLTKATIEQAVREANIALRGAHAELFTELDARAIPLLVFSAGLADVLEEVIRQHASAPLPAGAHVISNRMSFEPANGGFIGFTGQLFHVFNKRAGAVLDEPYFMSEEVKLRRNVLLLGDSLGDLQMASGLEADEVLSVGFLNDQAEERIGSYLAGYDVVIIGPDAGLQYALDLVREL 270          
BLAST of mRNA_Ecto-sp9_F_contig1095.829.1 vs.
Match: 5'-nucleotidase ((Fragment) n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3UTG8_HETAK)

HSP 1 Score: 237 bits (604), Expect = 2.180e-71
Identity = 122/268 (45.52%), Postives = 162/268 (60.45%), Query Frame = 1
Query:   55 VLFRDAEDFERKRQRIVAGGVDHLQIISDFDFTLTKFWVNGKRGDSCHAVIDESGLLGEGFHKRTSELRDHYYPLEVAPDLSPEMRVEMMVEWVTKAHEAMVAAGITKDILSAAVSKANLLFRPGHGELLRWVDKHGVPLLMFSAGIADVLEEAFRQHSAEPLPSTSRVISNRMAFDEDGNMTGFVGECFHVFNKHASSSVVKPYFETNEMRCRSSVLLLGDSLGDLNMAKGLSAEENLTVGFLNDKVEERTDAYLKAYDVVILGDGG 858
            V  +D +    K +R  A G   +QIISDFD+TLTKF  +GK G S H V+ E  +L E +H+    L D YYP+E  P +S   +V  MVEW    H A+V  G+T+D+L +AV+ A +  R G  +L  W +  GVP+L+FSAG+ DVL E   Q+  +PLPS   VISN M FD  G + GF    FHV+NK+A +    P+F  + ++ R ++LL+GDS GD  MA GL     L +GFLN KVEER D Y   YDVV+ GDGG
Sbjct:   65 VTIKDRDAVFGKLERFFADGPGKIQIISDFDYTLTKFHYDGKMGKSTHGVLAECDMLSEEYHRTARALFDRYYPVETNPSMSQAEKVPAMVEWWEADHAALVEHGLTRDVLRSAVAAAGVQLRAGCVDLFDWAEGRGVPVLLFSAGLGDVLTEVLAQNLNKPLPSHVHVISNTMEFDATGKLVGFPPPLFHVYNKNAGAVKDHPFFGES-VQARKNILLIGDSTGDARMADGLEGTTVLRIGFLNTKVEERMDTYKGLYDVVLTGDGG 331          
BLAST of mRNA_Ecto-sp9_F_contig1095.829.1 vs.
Match: 5'-nucleotidase (n=2 Tax=Monodopsidaceae TaxID=425072 RepID=W7TPE8_9STRA)

HSP 1 Score: 233 bits (594), Expect = 1.940e-69
Identity = 127/318 (39.94%), Postives = 175/318 (55.03%), Query Frame = 1
Query:   55 VLFRDAEDFERKRQRIVAGGVDHLQIISDFDFTLTKFWVNGKRGDSCHAVIDESGLLGEGFHKRTSELRDHYYPLEVAPDLSPEMRVEMMVEWVTKAHEAMVAAGITKDILSAAVSKANLLFRPGHGELLRWVDKHGVPLLMFSAGIADVLEEAFRQHSAEPLPSTSRVISNRMAFD------------------------------------EDGNMTGFVGECFHVFNKHASSSV-VKPYFETNEMRCRSSVLLLGDSLGDLNMAKGLSAEENLTVGFLNDKVEERTDAYLKAYDVVILGDGGFDFVLELLEEVAS 897
            V+ RD   F  K+ +I + G   LQ++ D+DFTLT F++NG+R  SCH  I++  LL   +H++   L+++YY  EV P LS   +V +M  WV +AH+ ++  G  + +L  AV  A+L  R G  E++    +  VPLL+FSAGIADVLEE  RQ    PLP T  V+SNRM F                                     EDG + GF    FHVFNK A S +    YF   +   R   +L+GDSLGDL+M+ GL  EE + VG LND+VEER D Y + +DVV+LGDG   +++ LL E+ S
Sbjct:   50 VVIRDPASFLAKKAKIASDGPSKLQLLFDWDFTLTHFFLNGRRACSCHKAIEDCDLLSAAYHEKAQALQEYYYAKEVDPSLSVAEKVPLMEAWVRRAHDLLIHHGFRRSLLPLAVKHAHLAVREGCQEVIDLSARAAVPLLVFSAGIADVLEEVCRQQLPRPLPDTVHVVSNRMVFSPVAAASPADAGAARPSVGAPQRGGRGGLEEPSQAGAEDGVLVGFTEPVFHVFNKRAESVLNTSAYFHQIDYEKRKHAILVGDSLGDLHMSDGLELEEIIKVGLLNDRVEERLDEYSQKFDVVLLGDGDLTYIIGLLRELIS 367          
BLAST of mRNA_Ecto-sp9_F_contig1095.829.1 vs.
Match: 5'-nucleotidase (n=3 Tax=Takifugu TaxID=31032 RepID=H2UV53_TAKRU)

HSP 1 Score: 231 bits (588), Expect = 2.450e-69
Identity = 125/286 (43.71%), Postives = 173/286 (60.49%), Query Frame = 1
Query:   43 NSPRVLFRDAEDFERKRQRIVAGGVDHLQIISDFDFTLTKFWVNGKRGDSCHAVIDESGLLGEGFHKRTSELRDHYYPLEVAPDLSPEMRVEMMVEWVTKAHEAMVAAGITKDILSAAVSKANLLFRPGHGELLRWVDKHGVPLLMFSAGIADVLEEAFRQHSAEPLPSTSRVISNRMAFDEDGNMTGFVGECFHVFNKHASSSVVKPYFETNEMRCRSSVLLLGDSLGDLNMAKGLSAEEN-LTVGFLNDKVEERTDAYLKAYDVVILGDGGFDFVLELLEEVAS 897
            + P V  RD +  ++  Q +V  G + LQ+ISDFD TLT+F  NGKR  +CH ++D S L+      +  EL D YYP+E+   LS E ++ +MVEW TKAH+ ++   I KD L+  V++++   R G       + KH VPLL+FSAG+ D+LEE  RQ  A       +V SN M FDE G +  F GE  HV+NK   + +   +F+  E+R R +VLLLGDSLGDLNMA G+   +N L +GFLNDKVEER  AYL +YD+V++ D   +    +LE   S
Sbjct:   17 SKPSVFMRDPQKVQKIMQSMVKAGFNTLQVISDFDMTLTRFAYNGKRCPTCHNIMDNSKLISSEGRAKLKELLDTYYPIEIDSSLSVEEKLPLMVEWWTKAHDLLIQQAIKKDHLAVMVNESDAKLRDGFQLFFDHLHKHNVPLLIFSAGVGDILEEVIRQ--AGVFHPNVKVFSNYMDFDEAGVLRAFKGELIHVYNKREGAMLNTGHFQ--ELRARPNVLLLGDSLGDLNMADGVQDMQNILKIGFLNDKVEERKQAYLDSYDIVLVKDETMEVPNAILELAPS 298          
BLAST of mRNA_Ecto-sp9_F_contig1095.829.1 vs.
Match: 5'-nucleotidase (n=2 Tax=Rivulidae TaxID=28771 RepID=A0A3Q3GWG6_KRYMA)

HSP 1 Score: 229 bits (585), Expect = 3.620e-69
Identity = 122/271 (45.02%), Postives = 167/271 (61.62%), Query Frame = 1
Query:   43 NSPRVLFRDAEDFERKRQRIVAGGVDHLQIISDFDFTLTKFWVNGKRGDSCHAVIDESGLLGEGFHKRTSELRDHYYPLEVAPDLSPEMRVEMMVEWVTKAHEAMVAAGITKDILSAAVSKANLLFRPGHGELLRWVDKHGVPLLMFSAGIADVLEEAFRQHSAEPLPSTSRVISNRMAFDEDGNMTGFVGECFHVFNKHASSSVVKPYFETNEMRCRSSVLLLGDSLGDLNMAKGLSAEEN-LTVGFLNDKVEERTDAYLKAYDVVILGD 852
            ++P V  +D +      Q I   G   LQ+ISDFD TLT+F  NGKR  +CH ++D S  +  G  ++  EL   YYP+E+    S E ++ +MVEW TKAH+ +V   I KD L+ AV ++  + R G+      + KHGVPLL+FSAGI DVLEE  RQ   +   S  ++ SN M FDE G + GF GE  H++NK   + +   +F+  E+R R +VLLLGDSLGDLNMA G+   +N L +GFLNDKVEER   YL +YD+V++ D
Sbjct:    6 SNPSVCMKDPQRVREILQAISEAGSSTLQVISDFDMTLTRFSYNGKRCPTCHNILDNSKAISSGCKQKLDELLKTYYPIEIDTSRSVEEKLPLMVEWWTKAHDLLVEQKIRKDDLAEAVRESEAMLREGYELFFDHLHKHGVPLLIFSAGIGDVLEEVIRQ--VQVFHSNVKIFSNYMDFDESGVLRGFKGELIHIYNKREGALLNTGHFQ--ELRTRPNVLLLGDSLGDLNMADGVQDMQNILKIGFLNDKVEERKQTYLDSYDIVLIKD 272          
BLAST of mRNA_Ecto-sp9_F_contig1095.829.1 vs.
Match: 5'-nucleotidase (n=2 Tax=Spumella elongata TaxID=89044 RepID=A0A7S3LZW9_9STRA)

HSP 1 Score: 231 bits (589), Expect = 4.390e-69
Identity = 126/290 (43.45%), Postives = 180/290 (62.07%), Query Frame = 1
Query:   52 RVLFRDAEDFERKRQRIVAGGVDHLQIISDFDFTLTKFWVNGKRGDSCHAVIDESGLLGEGFHKRTSELRDHYYPLEVAPDLSPEMRVEMMVEWVTKAHEAMVAAGITKDILSAAVSKANLLFRPGHGE----LLRWVDKHGVPLLMFSAGIADVLEEAFRQHSAEPLPSTSRVISNRMAFDE--DGNMTGFVGECFHVFNKHASSSVVKPYFETNEMRCRSSVLLLGDSLGDLNMAKGLSAEEN--LTVGFLNDKVEERTDAYLKAYDVVILGDGGFDFVLELLEEVAS 897
            RV+F + + FE K ++    G   L ++SDFDFT+TKF++NG RG SCH +I++ GL+   +H     L+  YYPLEV P L+ E + + M+EWV KAHE +   G+T+ +++ AV  A    + G  E     L       VP L+FSAGIADVLEE  R+  A    S   VISNR  F+E  +G +TGF     HVFNK +++ +   +F T +++ R+++LLLGDSLGD+ M++G+   ++  + VGFLND+VE R D YL+ YDVVIL D GFD    LL+E+  
Sbjct:   50 RVVFANKQAFEEKLKQFKLDGPSKLSVVSDFDFTITKFYMNGVRGASCHKIIEDCGLMAAEYHDEAQGLQAKYYPLEVDPTLNMEEKTKFMIEWVEKAHELLELHGLTRSVVTRAVHSALATGKVGLREKADTFLSLASSSKVPSLIFSAGIADVLEEILREQMAVDW-SQVHVISNRCIFEESGEGKVTGFEQPLLHVFNKKSTAYLHTNFFNTEDIKDRTNLLLLGDSLGDITMSEGMEINDDRIIKVGFLNDRVE-RMDQYLEKYDVVILDDPGFDIPYYLLQEICE 337          
BLAST of mRNA_Ecto-sp9_F_contig1095.829.1 vs.
Match: 5'-nucleotidase (n=1 Tax=Salarias fasciatus TaxID=181472 RepID=A0A672G8M8_SALFA)

HSP 1 Score: 229 bits (583), Expect = 7.210e-69
Identity = 123/271 (45.39%), Postives = 169/271 (62.36%), Query Frame = 1
Query:   43 NSPRVLFRDAEDFERKRQRIVAGGVDHLQIISDFDFTLTKFWVNGKRGDSCHAVIDESGLLGEGFHKRTSELRDHYYPLEVAPDLSPEMRVEMMVEWVTKAHEAMVAAGITKDILSAAVSKANLLFRPGHGELLRWVDKHGVPLLMFSAGIADVLEEAFRQHSAEPLPSTSRVISNRMAFDEDGNMTGFVGECFHVFNKHASSSVVKPYFETNEMRCRSSVLLLGDSLGDLNMAKGLSAEEN-LTVGFLNDKVEERTDAYLKAYDVVILGD 852
            ++P V  +D +  +   Q +V  G + LQ+ISDFD TLT+F  NGKR  +CH ++D S L+     ++   L D YYP+E+    S E ++ +MVEW TKAHE +V   I KD LS AV +++ + R G+      + +H +PLL+FSAGI D+LEE  RQ  A        V SN M FDE G +T F GE  H++NK   + +   +F+  E+R R +VLL+GDSLGDLNMA G+   EN L VGFLNDKVEER  +YL AYD+V++ D
Sbjct:    6 SNPSVCMKDPDRVQEVLQSMVKAGSNTLQVISDFDMTLTRFEFNGKRCPTCHNILDNSILISADCKQKLKGLLDTYYPIEIDSSRSVEEKLPLMVEWWTKAHELLVEQKIRKDRLSVAVRESDAMLREGYQLFFDHLHQHSIPLLIFSAGIGDILEEVIRQ--AGVFHPNVNVFSNYMDFDESGVLTAFKGELIHIYNKREGALLNTGHFQ--ELRTRPNVLLMGDSLGDLNMADGVQDMENILKVGFLNDKVEERKQSYLDAYDIVLIKD 272          
BLAST of mRNA_Ecto-sp9_F_contig1095.829.1 vs.
Match: 5'-nucleotidase (n=2 Tax=Parambassis ranga TaxID=210632 RepID=A0A6P7IX16_9TELE)

HSP 1 Score: 229 bits (584), Expect = 7.390e-69
Identity = 120/271 (44.28%), Postives = 171/271 (63.10%), Query Frame = 1
Query:   43 NSPRVLFRDAEDFERKRQRIVAGGVDHLQIISDFDFTLTKFWVNGKRGDSCHAVIDESGLLGEGFHKRTSELRDHYYPLEVAPDLSPEMRVEMMVEWVTKAHEAMVAAGITKDILSAAVSKANLLFRPGHGELLRWVDKHGVPLLMFSAGIADVLEEAFRQHSAEPLPSTSRVISNRMAFDEDGNMTGFVGECFHVFNKHASSSVVKPYFETNEMRCRSSVLLLGDSLGDLNMAKGLSAEEN-LTVGFLNDKVEERTDAYLKAYDVVILGD 852
            ++P VL RD +  +   + +V  G + LQ+ISDFD TLT+F  NGKR  +CH+++D S L+ E   ++ + L + YYP+E+    + E ++ +MVEW TKAHE +VA  I KD+LS AV ++  + R G+      + KH +PLL+FSAGI D+LEE    H A       +V SN M FDE G +  F GE  HV+NK   + +   +F+  E+R R +VLL+GDS+GDL MA G+   EN L +GFLNDKVEER   YL +YD+V++ D
Sbjct:    6 SNPSVLMRDPQRVQEILESMVKAGSNTLQVISDFDMTLTRFAHNGKRCPTCHSILDNSKLISEDCKEKLAGLLNTYYPIEIDSSRTVEEKLPLMVEWWTKAHELLVAQKIRKDLLSVAVRESGAMLREGYQLFFDHLHKHSIPLLIFSAGIGDILEEVI--HQAGVFHPNVKVFSNYMDFDESGVLKAFKGELIHVYNKREGALLNPGHFQ--ELRTRRNVLLMGDSIGDLTMADGVQDMENILKIGFLNDKVEERKQPYLNSYDIVLIKD 272          
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp9_F_contig1095.829.1 vs.
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Ectocarpus species9 EcSCA_722f female vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
5'-nucleotidase4.770e-20393.67n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 R... [more]
5'-nucleotidase7.160e-17896.86n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8... [more]
5'-nucleotidase3.270e-8051.21n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Y... [more]
5'-nucleotidase2.180e-7145.52(Fragment) n=1 Tax=Heterosigma akashiwo TaxID=2829... [more]
5'-nucleotidase1.940e-6939.94n=2 Tax=Monodopsidaceae TaxID=425072 RepID=W7TPE8_... [more]
5'-nucleotidase2.450e-6943.71n=3 Tax=Takifugu TaxID=31032 RepID=H2UV53_TAKRU[more]
5'-nucleotidase3.620e-6945.02n=2 Tax=Rivulidae TaxID=28771 RepID=A0A3Q3GWG6_KRY... [more]
5'-nucleotidase4.390e-6943.45n=2 Tax=Spumella elongata TaxID=89044 RepID=A0A7S3... [more]
5'-nucleotidase7.210e-6945.39n=1 Tax=Salarias fasciatus TaxID=181472 RepID=A0A6... [more]
5'-nucleotidase7.390e-6944.28n=2 Tax=Parambassis ranga TaxID=210632 RepID=A0A6P... [more]

Pages

back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp9_F_contig1095contigEcto-sp9_F_contig1095:8196..16679 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 of Ectocarpus species9 EcSCA_722f female vs UniRef902022-09-19
OGS1.0 of Ectocarpus species9 EcSCA_722f female2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score506.9
Seed ortholog evalue6.4e-141
Seed eggNOG ortholog2880.D8LDF4
KEGG rclassRC00017
KEGG koko:K01081
KEGG ReactionR00183,R00511,R00963,R01126,R01227,R01569,R01664,R01968,R02088,R02102,R02323,R02719,R03346
KEGG Pathwayko00230,ko00240,ko00760,ko01100,ko01110,map00230,map00240,map00760,map01100,map01110
EggNOG free text desc.Belongs to the pyrimidine 5'-nucleotidase family
EggNOG OGsKOG3128@1,KOG3128@2759
EC3.1.3.5
COG Functional cat.O
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko00001,ko01000
Hectar predicted targeting categoryother localisation
Ec32 ortholog descriptionHAD-like domain
Ec32 orthologEc-15_000820.1
Exons8
Model size1266
Cds size903
Stop1
Start1
Relationships

The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622928327.0806277-UTR-Ecto-sp9_F_contig1095:8195..85581622928327.0806277-UTR-Ecto-sp9_F_contig1095:8195..8558Ectocarpus species9 EcSCA_722f femaleUTREcto-sp9_F_contig1095 8196..8558 -
1692277834.0380034-UTR-Ecto-sp9_F_contig1095:8195..85581692277834.0380034-UTR-Ecto-sp9_F_contig1095:8195..8558Ectocarpus species9 EcSCA_722f femaleUTREcto-sp9_F_contig1095 8196..8558 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622928327.1246438-CDS-Ecto-sp9_F_contig1095:8558..86661622928327.1246438-CDS-Ecto-sp9_F_contig1095:8558..8666Ectocarpus species9 EcSCA_722f femaleCDSEcto-sp9_F_contig1095 8559..8666 -
1692277834.0536022-CDS-Ecto-sp9_F_contig1095:8558..86661692277834.0536022-CDS-Ecto-sp9_F_contig1095:8558..8666Ectocarpus species9 EcSCA_722f femaleCDSEcto-sp9_F_contig1095 8559..8666 -
1622928327.140647-CDS-Ecto-sp9_F_contig1095:9135..92461622928327.140647-CDS-Ecto-sp9_F_contig1095:9135..9246Ectocarpus species9 EcSCA_722f femaleCDSEcto-sp9_F_contig1095 9136..9246 -
1692277834.062972-CDS-Ecto-sp9_F_contig1095:9135..92461692277834.062972-CDS-Ecto-sp9_F_contig1095:9135..9246Ectocarpus species9 EcSCA_722f femaleCDSEcto-sp9_F_contig1095 9136..9246 -
1622928327.1547441-CDS-Ecto-sp9_F_contig1095:10194..102901622928327.1547441-CDS-Ecto-sp9_F_contig1095:10194..10290Ectocarpus species9 EcSCA_722f femaleCDSEcto-sp9_F_contig1095 10195..10290 -
1692277834.0708854-CDS-Ecto-sp9_F_contig1095:10194..102901692277834.0708854-CDS-Ecto-sp9_F_contig1095:10194..10290Ectocarpus species9 EcSCA_722f femaleCDSEcto-sp9_F_contig1095 10195..10290 -
1622928327.1679192-CDS-Ecto-sp9_F_contig1095:11767..118561622928327.1679192-CDS-Ecto-sp9_F_contig1095:11767..11856Ectocarpus species9 EcSCA_722f femaleCDSEcto-sp9_F_contig1095 11768..11856 -
1692277834.0787497-CDS-Ecto-sp9_F_contig1095:11767..118561692277834.0787497-CDS-Ecto-sp9_F_contig1095:11767..11856Ectocarpus species9 EcSCA_722f femaleCDSEcto-sp9_F_contig1095 11768..11856 -
1622928327.1870198-CDS-Ecto-sp9_F_contig1095:13091..132391622928327.1870198-CDS-Ecto-sp9_F_contig1095:13091..13239Ectocarpus species9 EcSCA_722f femaleCDSEcto-sp9_F_contig1095 13092..13239 -
1692277834.0869956-CDS-Ecto-sp9_F_contig1095:13091..132391692277834.0869956-CDS-Ecto-sp9_F_contig1095:13091..13239Ectocarpus species9 EcSCA_722f femaleCDSEcto-sp9_F_contig1095 13092..13239 -
1622928327.200737-CDS-Ecto-sp9_F_contig1095:13829..138981622928327.200737-CDS-Ecto-sp9_F_contig1095:13829..13898Ectocarpus species9 EcSCA_722f femaleCDSEcto-sp9_F_contig1095 13830..13898 -
1692277834.095232-CDS-Ecto-sp9_F_contig1095:13829..138981692277834.095232-CDS-Ecto-sp9_F_contig1095:13829..13898Ectocarpus species9 EcSCA_722f femaleCDSEcto-sp9_F_contig1095 13830..13898 -
1622928327.2151146-CDS-Ecto-sp9_F_contig1095:14511..146541622928327.2151146-CDS-Ecto-sp9_F_contig1095:14511..14654Ectocarpus species9 EcSCA_722f femaleCDSEcto-sp9_F_contig1095 14512..14654 -
1692277834.1038826-CDS-Ecto-sp9_F_contig1095:14511..146541692277834.1038826-CDS-Ecto-sp9_F_contig1095:14511..14654Ectocarpus species9 EcSCA_722f femaleCDSEcto-sp9_F_contig1095 14512..14654 -
1622928327.2281907-CDS-Ecto-sp9_F_contig1095:16540..166791622928327.2281907-CDS-Ecto-sp9_F_contig1095:16540..16679Ectocarpus species9 EcSCA_722f femaleCDSEcto-sp9_F_contig1095 16541..16679 -
1692277834.112798-CDS-Ecto-sp9_F_contig1095:16540..166791692277834.112798-CDS-Ecto-sp9_F_contig1095:16540..16679Ectocarpus species9 EcSCA_722f femaleCDSEcto-sp9_F_contig1095 16541..16679 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp9_F_contig1095.829.1prot_Ecto-sp9_F_contig1095.829.1Ectocarpus species9 EcSCA_722f femalepolypeptideEcto-sp9_F_contig1095 8559..16679 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_Ecto-sp9_F_contig1095.829.1

>prot_Ecto-sp9_F_contig1095.829.1 ID=prot_Ecto-sp9_F_contig1095.829.1|Name=mRNA_Ecto-sp9_F_contig1095.829.1|organism=Ectocarpus species9 EcSCA_722f female|type=polypeptide|length=301bp
MPAVEENGGGSKAENSPRVLFRDAEDFERKRQRIVAGGVDHLQIISDFDF
TLTKFWVNGKRGDSCHAVIDESGLLGEGFHKRTSELRDHYYPLEVAPDLS
PEMRVEMMVEWVTKAHEAMVAAGITKDILSAAVSKANLLFRPGHGELLRW
VDKHGVPLLMFSAGIADVLEEAFRQHSAEPLPSTSRVISNRMAFDEDGNM
TGFVGECFHVFNKHASSSVVKPYFETNEMRCRSSVLLLGDSLGDLNMAKG
LSAEENLTVGFLNDKVEERTDAYLKAYDVVILGDGGFDFVLELLEEVASK
*
back to top

mRNA from alignment at Ecto-sp9_F_contig1095:8196..16679-

Legend: polypeptideCDSUTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_Ecto-sp9_F_contig1095.829.1 ID=mRNA_Ecto-sp9_F_contig1095.829.1|Name=mRNA_Ecto-sp9_F_contig1095.829.1|organism=Ectocarpus species9 EcSCA_722f female|type=mRNA|length=8484bp|location=Sequence derived from alignment at Ecto-sp9_F_contig1095:8196..16679- (Ectocarpus species9 EcSCA_722f female)
ATGCCTGCTGTGGAAGAAAACGGCGGCGGCAGCAAGGCGGAGAACAGCCC TCGGGTACTATTCCGCGATGCGGAGGACTTCGAGCGAAAGCGGCAGCGGA TAGTGGCAGGCGGCGTGGACCACTTGCAAATCATATCAGGTACAGCAGCA CAAGAAAATGGGCGGGGGGTGGTATCATGCGTGCAGCAGTATTAGGAGAT CATCCGCAGAAGAGTACATTTTTGCTCTTGTAATGCATAGTCATCCAGTA CATGTCCACGGAAACTGCACGTCCGCAGTCAATTTTTTTTGCTGGCACGC GCTTTTTTTAAACTTTCTCTTTTTGTGTGGCTGTTTTTCTAGAAAGTAAA CACAAACAAGAAAATTGAGCCTCAAAATCCCCAACATCTAAGAATTTAGC ACCGTTTGTGCAAGCACCCCAACACTAACAACCTACAATTCGGCCATTCG TATCTAGCACCACAAAAAAACCCAACCTCGGCAAAAAACTAGAGGTTCCC AAGTGCAGGCGCTAACTAACTGTGGTCTGTAGCATTTTCTTCTAATGTTT TTTGGTTTTCCTTTCCCCTTGTTGTTTTTTGGGGGCAGGCCTGGGAACCG TAACCGTTCCATGCCAGCCAACAGATGATGATGAGATGGTACAATTTAGA TTTTTGCAGCTTGCTGAGTCGTTCCGTTCTCGGTCTCTTTTAGGACATCT CTATTACCCTCTTAACGAAAAATAGATGTCACAGCATCAGCTGGCGAGTG GAGAAAGAGGCTCTAAATAACTGTTTAGGTTTTCGCTGGGCACCCTTCTG CCAAACTTCTCTCTGGACCTACATTTCTTCGCGAATGCTGGGACATACCT AGACCGTCTCTGGGTCAATTCTGTTCCTTCAGTCCCGTTGTGCGTGCTGT GAACTTTGGTCAATGGTAGTCACATGGTAGAACGTGTATGGAGACTCGGG GCTCCGTGTTATGGATATCATTTAGGGTATCCATCTATGGTTTGGATATG ATAGACGGGATCCTATGTCTTGGACTCTCATCTGTCACTCTCCATGTCTG TTTTCACGAATATCAAACGCACTGTTTGAGTGTGTCAGATCACTCAAACC TACCATCAGCCCCTCAATGGGGATGGAATCCTGATGGAAATGGGTCAATT GTCAATCCTGGCAAGTCTTTTACGACGTGCGCCATTGTTCGTGATTGAAG AGCCCGCGTCAACAACGACCACTACCCGCCAAAGGGCGGCGAACTGCAGA CAAACTAAAGAGAATGCCGATATGGAAAACGAGCGATCCTAAGCTTGTGA CCACGTAAATTCGTTTCGAAGAGAGCAATTGGAACGTACTGGATAGAGCC CAGTGTTTCGTGATCCATCTGGGTGATGGGTGATGATGCGAAAGATAACA AGAGCAAGCAACACCGCCAGAACCGGGCACCCGCTGCTGCCGTAACTCAT TCACTTTGCGCGCACCACAACATTCACCGCTGCCCGCTTTATGTACACCA CGGCCTCTCTGACCACTTCTTAGTAAAGGTAGCCGAACATTCTACCAGCC TCTGAGAGATGAAGCGCCTCGATTACAAACTGCAACTAAAACCCCATACC GTACGAAAGCTAGTCCAGCAAACAGGGGGTGCTACAATACCCAACACTTT AGCCACTTTGTCCCGAGCTAATAACAGCCCTAAACCTACAATGGTATTGG AGGTGGAAAGCGCATAGTCGTGAGTGGTCACCATAGGAGGGAACGAACCG CTGAACTCTCCTCTCGTTTAAAACGGAAGGCAGACCCCACAGGGAGAAAA ATCGAAGAAAATTGTCAGTAGCCAACCATCTAGGTGTGCGTCATGATCGA AGATCTCTGATGCGCGTGCGTCACCCCCGGAAAAGCTGCATAGCTCATGT GGCTGTTTCAGCTCCCGAAGGACCTATTGTGACCACAAAAAAACTGTTTG TTCTGCTCGATCGATCTACGGCAAGTTAATCTCTCCCGCATGGGGCATCG CCGTCGTTTTTTTGCGGTCGCACAGACTTCGACTTTACCTTGACCAAGTT TTGGGTGAATGGCAAGAGGGGCGACTCCTGTCACGCCGTGATCGATGAGA GCGGATTGTTGGGGGAGGGTTTTCACAAAAGAACCTCGGAGCTAAGGGAC CACTACTATCCGCTAGAGGTCAGGCAACGCTGTCCATGCACGCAGTAAAT TGTTTTCGCGGGGTGTGCGACGTGCCCTACGCCAGAGAGATCTGGTGTAG CTTGGGGAGAGATCCAGTCTAGGTCGGGGAGAGATCCAGTCTAGCTTGGG TAGAGATCCAGCCTAGCTCGGGGAGAGATCCAGTCTAGCTTGGGCAGCGT CTCTGGTAGCTGTACCGAGGCTCGACAGCTGGAGCAAGCCCTGTCAGTAT CTGTTACTCTGGAGGCGCCGCGAATTCACGCCAACCTGCATCTGATGGGG GCGTTTTCTTTTGGGGGAAGACCTGGCATGGAAGCCTCCCATGTAAAACG AAAGGCGTCGGCCTCTCTTTCGTGTGTCGTCGTGGTCGTGGTCGTCGTGG TTGTTGTTGTTGTTGTTGTTGTTGTTGTTGTTGTTGTTGTTGTTGTTGTT GTTGTTGGTGGTGGTGGTGGTGTTGTTGCTGTCGCTGCTGCTGCTGCTGC TGCTGCTGCTGCTGCTGGTTCTGTTGTTGTTGCTGCTGCCGTTGCTGCCG TTCTTCAGCTTTTGTAGTGCCGTATTACGAACTAGTCCACGCGTGTAAAA CGAAACGAGATACCGTCGCGCGTGACACCAGGTGGCTCCGGACCTTTCGC CAGAGATGCGAGTGGAGATGATGGTGGAGTGGGTCACCAAAGCTCATGAG GTGAGTGCGCCGATTGTCGTTCAACACCTAAAATATTTAGGTGATCGCCC CCCCGCCCGATTTACTGGCTTTCATGACAGGTTTCTGTTACGCCGGGAAC CATAAGCCGGCGGAAGGGTAGATGCACCTGTCAGTCGTTTCGTCACTTTG GAGGCTTTTCAATCCTGTGTGGCGCACGCACCCCTCACCAAAACGCATTG CTCTGTCGCTTGAGAGGCACGTACACCCACGTGTTGGCACACACGCACGC ATGTAAAAAGGCTACTGCACGATGATACTGCTGTATCACCGTCACCGGCT TCGCGACCGACGGAAAGACCAATCCTGGAGACCGCGGAATCCCCCCCAAA ACTCGCTTCTTTCAAGCAGTACGGCCACACTGGTAGGTCGACTATCGACA GGTTGACAATTGCAGACCAAAACATGGTCTGGAAAGTCGCACCTGCCAAA AATTATAGGTTTGGTGTGTTTTATTTTGTTTTTTTGTTTTTAGTAGCTTT TAGTTTTCGGGATGCAATAAATCAAGCGTGAAATGTCGTCAAAATGACGC GTTGAGCGTGTCTGCGCTGCTCTGTGCGCCGTGTCTGCAGGCGATGGTGG CGGCTGGCATCACCAAGGACATACTGTCGGCCGCGGTGTCAAAGGCTAAC CTCCTCTTTAGGCCTGGCCACGGCGAGCTCCTCCGCTGGGTGGACAAGCA CGGGGTCCCGCTCCTCATGTTTAGCGCGGGCATCGCTGGTGAGGGGGGGG GAATGTACTCATAGCCGTACATGCCGTAGTCGCTAGACCGTTGACGTCGC ATCCCTACAATGCCGGGACGGAGCACGCCCGGTTTTCACCGGAGCAGGCT AGCACATCACCAACCATGGGGGGCGTACTCTTATGTGTATTCCTTTCCGT TTACAACATTGACCACGCGTCCTCCAGAGGACGAAACGCTTTTCCCATAA GGACGATCACCGATGGCCAGTCGTTCCTTCCTACTTTGCCAAAGGTGGCT CAAAAATTCTTTCCCAATCCTGTCCATCCGATGGATATCAGTTCCCGCCC TTTCATCCCACTTCTTATGCCGTTCCATTTTGCATGAACTTCGCCAAGCC TGGTTCTGAGTGTGTGAGGTAATGGGGTGCTACAGCCAGCGTTATGAAGG GAGCGGCGAGGGCAAGGGTTGTTCGTTCCTGTTTTCTTTGCGACTACACT GATGTTGGTGGCACAAGACACCCTCTTCCTACCGCTACTCCACACAGCGA CATCCCTCAGAAACCGCTACAGCTCGGACACAGGAGCAGCAAGCGCTGAG AATCGCTATCCTCCCTGCTTGTAGGTTATTCCAGAGCGTTAGTCTAGCGG GATTTCTGGACGGAGAGCCACGTGAAAGGCGCAATTTATTTCACCCGATG CTTGTCAAGAATTGTCCTAGATTTTGTGCATGGTCTGGATCTTTGAGTAG TGGTGCACGTGGCTAGGTTGACACTATTGCATACAGTCGGGGCTCCGATA TAAGAGGGAGGGTACCTTATAAGAGGGGGTTCCAACATAAGACGGTCGAA ATCGGTTGTCGCAGACTCGACCCGCTACAGTATAATTGGGTACCTTCTTA CTCTGGTATAAGAGGGGGCTCCGCTTTAAGAGGGTGCCTTATAAGAGGGT CCAAATCGGTTGTCACAGACTCGACCCGCTTAGGTACAGTTGGGTACCCT CATTCTGATATAAGAGGGGGCTCCGATTTGAGAGGGTTGAGGGCCTTCGT CACACCCCCCTTCTATATCGGAGCCTCGACTGTAACATGTAGTGTCTAGC GCGTTGCCATTTCGTTGTTCCCCAGTGATTGGTCGACTCCACCGACGCGT TGCTGCTGTGTCCCGGTCTTGCTTTTTGCGGGTCGAGGTCTCCAGCTTTG GCTTTTGAATTCCTGTACCCATGGTATTGCCCCTCCCTTTCCGTCTCTCA TTCGGGGATTGTTTTTCCACCAGACGTCCTAGAGGAGGCGTTTCGACAGC ACTCGGCGGAGCCCCTGCCGTCCACGAGCCGCGTAATCTCCAACAGAATG GCTTTCGATGAGGTGAGAATCGGCATCAGCACGAGCCCTCCCTTAAAGAC ATTGCTTGTGGGACGGGAGCCTATGGCCCTTCTGGGTTTGTTTGTGAGTT GGTGGCGGTCCCTGTAGAAAGGCCGCATTTTTATGGCTAATCGTCCTGAG TAAGGCAGGTGATATCGCTTGACATGGATGGAGTATGTAAGTACCTTGTG TCATAATCAGAATAGTTCGTGGTGCCTGATATATGGCCTACGGGACAAAC CCTTGCCGTTCCTCGGCGGTGCTATGCAGGGACCGTTACAATTAATACAA TACCATGTTCTTGAGGGGGCATTGGACTTTTCTCTTGCCAGCCCGCGTAC ACTCTCCGCTGTCTGTCGCGGGTTCTATTGCTTGCTTGTTTTGGAAACCC GTGAGCTGCTCCTCGCACCTCTTGCAGCCTGCTGGTGTGTCTCCGTTTGC GTAGCCCCCCAAAAGTCCTCATTTTTTTTTTTTCAGCATATACATACAAA GTACACATATCGACTAGTATACCCGTTCAAGATCATACCACAACGTTGAA TTCAAGTTGGGCTCGACTTGCTTGGTTGGGCTCGCCTCGCCTTGGTTGCT CTCGCTGAGTCGCCTTCGCGCTTTTTTGTTTTTTTGATCAAGGGATACTT TGTAGGTCAATTTTGTTTTTCGTTATATACAAACCCTTACTTTGATATAT CTTGGGTTGGTCTGTAGCCACGGAAGGCGTCCGCGTCAGTTAGAACAGTA CGGATAAAGTGCTGAGCGGAGACCGGAAAGTTTGTTCAGTATGAAGACAA ATAACAACAACATCAATAACAACAACAACGACAGCAACAATGCAAATGCC ATCGTGGCCTGGTTGAGTCAGCCCTTGGTCGCCGCAGAAGCATCGTTGCT TCCCGCACGTGCGCCATCGGCTCATGATCGTTGCTAACGTTGTTGGTATG GTATATTGGAGTATATTGCTTCGTCTCGCAGGGGGAGATCTTCGCCGTTG GTGTAGTACTGATCCCCCCCCCGCCCTCTTTGATTTCCCTGTAGCCTTGG CTGGCGGAAACCCGGCATATCGCTCCGTCCCGGCGTTGTAGGAATGCGAA GTCTATGGTCTAGCAACTACGACATGCATTTGCATGAGTACCCCCCCCCC CACCTTCCTGTCTGCTTGCTTCCTCGGGGGTTGGGAAGGGGTCCCCATCG AAAAGGGTGCTTCGCGAATGAAAAGCCAAACCATCAGAGCCATTTCTTTT CCGTCCGGGCCGTTGAACCCCTGCGAGCGAGTATGCCAGCCCACCCAATC CGAAAGCTTGTAGATAACACGTTTCGCTTCTATGAAAATTTGCGTGGGTT GCTCGTTCCGTGCAATTTACCGCTCACAGAAGCAGACGTTCTTTTGTCTT GAGAGGGAGGCACGATAAACCAACGCCCCCTCCTCCTTGTTCTCGCCCCG ATGAAAATTCTCGTGATATGTCGCTGCGGTTTCTGGCAGGACGGGAACAT GACCGGCTTTGTGGGAGAGTGCTTCCACGTGTTCAACAAGCACGCCTCTT CTTCGGTAGTGAAACCCTACTTTGAAACGAACGAGGTCAGTCACGAGGCT CTTTTTTGTTGCCATGGTTTGGTTGTGCCGGTCGGTCTCCCTCCGGACGT ACGTTAGTCATCAACCGCCGATTGTTTCTCTGTAGCAGGTTTGCGTCCTT CGGTATTCCACACTGCGTCCTCCCCTCCGGTAGTGAAGTTCTTCCTTAAA TCGGAGGCGGTAGGTGCCGTAAGAGGCAGAGAGATGGCACCCCCCCCCGT AGACCGACTTTCAAAAGCTCGATTTCTCCACTAACAAGGGGGTGCGGGAA GTGACCGATAATTCTACGGAAAGCCCCGGACGAGATGTTACCCAAAACCC CCACTTTTGGTGTTGGCACAAAAAGCTTGGTTGTGGAGCAATCGACCCCT GAAAATCGGTCTAGGGGGGGTGCCATCTCTCCGCACTCTTAAGGTCGCCC TACACGTTTCCTGTCAACAGGTAGGTCGCGCTCGTTCCTTTCCGCGTTCC CCCCCAAAGGAACCGGTGTGAAAGTAGGTCTTCGTTGCTACGCCTTGGGG CGTGGCGTGCTGTTGCTTCGTCCCTGCCTGCGGCGGTGTAACCGTCATTC CAGAGGAGGAAGCGAGGTTTTGCCCCGTTTTCCTCCGTTGAATATCGGCA CATGTTTACATTGTCTCCTGTATCTCTCTCTCTCTCTCTCTCCTTCCCTC CCCCTCTGTCTTTCTGTCTGTCCCCCCAATCCCTGGGGCCATTTGACCAT ACGCGTCGTCAACCGTCACATGGCCGCATCACTTAACGACAACGCCCCCG CTCGCCTTGCTCGCCCCTTCGATACAAGCAGCTAGACAACACCTTGTTAT GATGTCGGTAGTATTAGGCACAAGAGCGCAGAGAGCTCCCTCCTCGAGTG ACGAGCTTCAAGACCTCCCACGAACCTTTGCACACTCTGACTGACCCCTG TGTCCTTTCTTCGCTTATTCCTCATGCCGGTAGATGCGATGTAGGAGTAG CGTTCTGCTGCTGGGGGACAGTCTAGGAGATCTCAACATGGCCAAGGGCC TTAGCGCGGAGGAGAATCTGACCGTCGGGTTTCTCAACGATAAGGTGGGC CGAATGAATGCCTCGAATGTCGCGCCCGCGAGAGGGGAGTTCGGACCCTC CTGCGTGCTTACCTTTTTTTTTCCTGTCATCATTAGAGTGTTTTTGCTGT TTGTTGATGGTGGTGCTGTGTTTGTTGGGTTTCGGTCTGTTGGTTGGTCC CCAATTTCTTCATGCGTGTCTTTCGCTGATCGTTGTATTTTTTCTTCGGT ACTCCGCGCTTGAGATGTGTGTTTCACCTGTTTGTTGTGGTGATTCCGCA AAGGTTGTTGTTGTTGTTGTTGTTGTTGTTGCTACTGTTGACCCCTCGTG TCGACCTCTCATGATTCGATGAGCAGGCGAGTCCAAGGGCAGGAGGAGGC TACGTCTCCCGTGTTGCTTACGCTTCGTTTGCACGACCTTGCTTGTACTT CATATTTTTTTCACTGGATCCTCCTCCTCCGTGGCACATCTCGTTTGTTT TGTCGCCGAACAGGTCGAGGAACGGACGGATGCCTACTTGAAGGCGTACG ATGTCGTCATCCTCGGCGATGGGGGTTTCGACTTTGTTCTCGAGCTATTG GAAGAAGTGGCCTCCAAATAGAACTTCTAAATAATTGTTCAGGTTGCTGG TTTTACTATTGTTGAGTATTTACGGAAGAAATTTAGTACCGCGGGAATTC AGACGGTTCAGCTGGAGGAGGTAAATAGGTGCTTTCGGGAGTCTGGCCAA GAGGCCAGCGCTCGGCGATAGCGGTGTTGCTTCCCATCATGTCGAGGTGT CGAGGTGTCGAGGTGTCGAGGAAGAGGTGGCCTCCGAATAGACTGCTGTT CCCTTCATTGATGTATCGTTGTGCTGGCCCGTCAAAGGGAGAGTAGCCTT CGTTCGCAGGTTTCGGGGAGGTTGGGTTAGGGTTAGGGTTAGGGAATAGG GTCTGCGTCCCCCCCCCCTCCCTGTCTGTTTCCT
back to top

Coding sequence (CDS) from alignment at Ecto-sp9_F_contig1095:8196..16679-

>mRNA_Ecto-sp9_F_contig1095.829.1 ID=mRNA_Ecto-sp9_F_contig1095.829.1|Name=mRNA_Ecto-sp9_F_contig1095.829.1|organism=Ectocarpus species9 EcSCA_722f female|type=CDS|length=1806bp|location=Sequence derived from alignment at Ecto-sp9_F_contig1095:8196..16679- (Ectocarpus species9 EcSCA_722f female)
ATGCCTGCTGTGGAAGAAAACGGCGGCGGCAGCAAGGCGGAGAACAGCCC
TCGGGTACTATTCCGCGATGCGGAGGACTTCGAGCGAAAGCGGCAGCGGA
TAGTGGCAGGCGGCGTGGACCACTTGCAAATCATATCAGATGCCTGCTGT
GGAAGAAAACGGCGGCGGCAGCAAGGCGGAGAACAGCCCTCGGGTACTAT
TCCGCGATGCGGAGGACTTCGAGCGAAAGCGGCAGCGGATAGTGGCAGGC
GGCGTGGACCACTTGCAAATCATATCAGACTTCGACTTTACCTTGACCAA
GTTTTGGGTGAATGGCAAGAGGGGCGACTCCTGTCACGCCGTGATCGATG
AGAGCGGATTGTTGGGGGAGGGTTTTCACAAAAGAACCTCGGAGCTAAGG
GACCACTACTATCCGCTAGAGACTTCGACTTTACCTTGACCAAGTTTTGG
GTGAATGGCAAGAGGGGCGACTCCTGTCACGCCGTGATCGATGAGAGCGG
ATTGTTGGGGGAGGGTTTTCACAAAAGAACCTCGGAGCTAAGGGACCACT
ACTATCCGCTAGAGGTGGCTCCGGACCTTTCGCCAGAGATGCGAGTGGAG
ATGATGGTGGAGTGGGTCACCAAAGCTCATGAGGTGGCTCCGGACCTTTC
GCCAGAGATGCGAGTGGAGATGATGGTGGAGTGGGTCACCAAAGCTCATG
AGGCGATGGTGGCGGCTGGCATCACCAAGGACATACTGTCGGCCGCGGTG
TCAAAGGCTAACCTCCTCTTTAGGCCTGGCCACGGCGAGCTCCTCCGCTG
GGTGGACAAGCACGGGGTCCCGCTCCTCATGTTTAGCGCGGGCATCGCTG
GCGATGGTGGCGGCTGGCATCACCAAGGACATACTGTCGGCCGCGGTGTC
AAAGGCTAACCTCCTCTTTAGGCCTGGCCACGGCGAGCTCCTCCGCTGGG
TGGACAAGCACGGGGTCCCGCTCCTCATGTTTAGCGCGGGCATCGCTGAC
GTCCTAGAGGAGGCGTTTCGACAGCACTCGGCGGAGCCCCTGCCGTCCAC
GAGCCGCGTAATCTCCAACAGAATGGCTTTCGATGAGACGTCCTAGAGGA
GGCGTTTCGACAGCACTCGGCGGAGCCCCTGCCGTCCACGAGCCGCGTAA
TCTCCAACAGAATGGCTTTCGATGAGGACGGGAACATGACCGGCTTTGTG
GGAGAGTGCTTCCACGTGTTCAACAAGCACGCCTCTTCTTCGGTAGTGAA
ACCCTACTTTGAAACGAACGAGGACGGGAACATGACCGGCTTTGTGGGAG
AGTGCTTCCACGTGTTCAACAAGCACGCCTCTTCTTCGGTAGTGAAACCC
TACTTTGAAACGAACGAGATGCGATGTAGGAGTAGCGTTCTGCTGCTGGG
GGACAGTCTAGGAGATCTCAACATGGCCAAGGGCCTTAGCGCGGAGGAGA
ATCTGACCGTCGGGTTTCTCAACGATAAGATGCGATGTAGGAGTAGCGTT
CTGCTGCTGGGGGACAGTCTAGGAGATCTCAACATGGCCAAGGGCCTTAG
CGCGGAGGAGAATCTGACCGTCGGGTTTCTCAACGATAAGGTCGAGGAAC
GGACGGATGCCTACTTGAAGGCGTACGATGTCGTCATCCTCGGCGATGGG
GGTTTCGACTTTGTTCTCGAGCTATTGGAAGAAGTGGCCTCCAAATAGGT
CGAGGAACGGACGGATGCCTACTTGAAGGCGTACGATGTCGTCATCCTCG
GCGATGGGGGTTTCGACTTTGTTCTCGAGCTATTGGAAGAAGTGGCCTCC
AAATAG
back to top