prot_Ecto-sp9_F_contig1092.804.1 (polypeptide) Ectocarpus species9 EcSCA_722f female

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp9_F_contig1092.804.1
Unique Nameprot_Ecto-sp9_F_contig1092.804.1
Typepolypeptide
OrganismEctocarpus species9 EcSCA_722f female (Ectocarpus species9 EcSCA_722f female)
Sequence length96
Homology
[Close]
BLAST of mRNA_Ecto-sp9_F_contig1092.804.1 vs.
Match: Uncharacterized (protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LNR8_ECTSI)

HSP 1 Score: 143 bits (360), Expect = 1.300e-42
Identity = 95/95 (100.00%), Postives = 95/95 (100.00%), Query Frame = 0 
Query:    1 MRIAASAAARAFAKAARRTARPGQIGEGVSHGEAGRTMAATRMRAINTATGIQTHVGAAAVLVSKVVMISCSSSVAPTFLEXXXXXXXXXXXRRN 95
            MRIAASAAARAFAKAARRTARPGQIGEGVSHGEAGRTMAATRMRAINTATGIQTHVGAAAVLVSKVVMISCSSSVAPTFLEXXXXXXXXXXXRRN
Sbjct:    1 MRIAASAAARAFAKAARRTARPGQIGEGVSHGEAGRTMAATRMRAINTATGIQTHVGAAAVLVSKVVMISCSSSVAPTFLEXXXXXXXXXXXRRN 95
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp9_F_contig1092.804.1 vs.
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Ectocarpus species9 EcSCA_722f female vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
Uncharacterized1.300e-42100.00protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 ... [more]
back to top
InterPro
Analysis Name: InterProScan on OGS1.0 of Ectocarpus species9 EcSCA_722f female
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_N_REGIONSignal peptide N-regioncoord: 1..2
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDESignal Peptidecoord: 1..13
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_H_REGIONSignal peptide H-regioncoord: 3..8
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 14..95
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_C_REGIONSignal peptide C-regioncoord: 9..13

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp9_F_contig1092contigEcto-sp9_F_contig1092:6352..7484 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Ectocarpus species9 EcSCA_722f female2022-09-29
Diamond blastp: OGS1.0 of Ectocarpus species9 EcSCA_722f female vs UniRef902022-09-16
OGS1.0 of Ectocarpus species9 EcSCA_722f female2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp9_F_contig1092.804.1mRNA_Ecto-sp9_F_contig1092.804.1Ectocarpus species9 EcSCA_722f femalemRNAEcto-sp9_F_contig1092 6097..7484 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp9_F_contig1092.804.1 ID=prot_Ecto-sp9_F_contig1092.804.1|Name=mRNA_Ecto-sp9_F_contig1092.804.1|organism=Ectocarpus species9 EcSCA_722f female|type=polypeptide|length=96bp
MRIAASAAARAFAKAARRTARPGQIGEGVSHGEAGRTMAATRMRAINTAT
GIQTHVGAAAVLVSKVVMISCSSSVAPTFLEEEEEDEDDDGGRRN*
back to top