prot_Ecto-sp9_F_contig1089.769.1 (polypeptide) Ectocarpus species9 EcSCA_722f female

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp9_F_contig1089.769.1
Unique Nameprot_Ecto-sp9_F_contig1089.769.1
Typepolypeptide
OrganismEctocarpus species9 EcSCA_722f female (Ectocarpus species9 EcSCA_722f female)
Sequence length200
Homology
BLAST of mRNA_Ecto-sp9_F_contig1089.769.1 vs.
Match: Uncharacterized (protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JYT7_9PHAE)

HSP 1 Score: 347 bits (891), Expect = 2.430e-112
Identity = 166/197 (84.26%), Postives = 183/197 (92.89%), Query Frame = 0
Query:    1 MSSSLLLPLLLLGCSSFYGQCATISISPGGTAFQGALDEVNPGDVIELGHGDYWEDLKTRTDGTADMPITIRGAAGTDDRENVVLRGDGTSSRVLEIKHDYYIIEGFTVDGDAEDDPKRNSDSDSAEDMWRDILIYAIADREPTERDGGYVSTLDGLVIRNMKLANAGGECVRLRDHVTYAEVHHNNITDCGIYDFR 197
            MSSSLLLPLL +GC SFYGQCATISI+PGGTAFQ ALD VNPGDVIELG+GDYWEDLKTRTDGT DMPITIRGA GTDDRENVVLRG GTS+RVLEIKHDYYI+E FTV+GDAEDDP R++DSDS EDMWRD+LIYA+A+REPTERDGGYVS +DGLVIRNM + NAGGEC+RLRDHVTYAEV+ N+ITDCGI+DFR
Sbjct:    6 MSSSLLLPLLFIGCLSFYGQCATISITPGGTAFQDALDVVNPGDVIELGNGDYWEDLKTRTDGTVDMPITIRGAGGTDDRENVVLRGAGTSTRVLEIKHDYYIVEDFTVNGDAEDDPDRDADSDSPEDMWRDVLIYAVANREPTERDGGYVSAIDGLVIRNMAVTNAGGECIRLRDHVTYAEVYSNHITDCGIFDFR 202          
BLAST of mRNA_Ecto-sp9_F_contig1089.769.1 vs.
Match: Beta_helix (domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L3G3_9PHAE)

HSP 1 Score: 335 bits (859), Expect = 6.150e-112
Identity = 161/197 (81.73%), Postives = 180/197 (91.37%), Query Frame = 0
Query:    1 MSSSLLLPLLLLGCSSFYGQCATISISPGGTAFQGALDEVNPGDVIELGHGDYWEDLKTRTDGTADMPITIRGAAGTDDRENVVLRGDGTSSRVLEIKHDYYIIEGFTVDGDAEDDPKRNSDSDSAEDMWRDILIYAIADREPTERDGGYVSTLDGLVIRNMKLANAGGECVRLRDHVTYAEVHHNNITDCGIYDFR 197
            MSSSLLLPLL +GCSSFYGQCATISI+PGGTAFQ ALD VNPGDVIEL +GDYWEDLKTRTDGTADMPITIRGA GT D+ENVVLRG GTS+RVLEIKHDYYI+E FTV+G AE DP R++DSDSA+DMWRD+LIYA+A+REPTER GGY+S +DGLVIRNM + NAGGEC+RLRDHVT AEV+ N+ITDCGIYDFR
Sbjct:    1 MSSSLLLPLLFIGCSSFYGQCATISITPGGTAFQDALDVVNPGDVIELSNGDYWEDLKTRTDGTADMPITIRGAGGTGDKENVVLRGAGTSTRVLEIKHDYYIVEDFTVNGHAEGDPDRDADSDSAQDMWRDVLIYAVANREPTERAGGYISAIDGLVIRNMAVTNAGGECIRLRDHVTNAEVYSNHITDCGIYDFR 197          
BLAST of mRNA_Ecto-sp9_F_contig1089.769.1 vs.
Match: Uncharacterized (protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L8H5_9PHAE)

HSP 1 Score: 340 bits (871), Expect = 1.780e-109
Identity = 163/197 (82.74%), Postives = 180/197 (91.37%), Query Frame = 0
Query:    1 MSSSLLLPLLLLGCSSFYGQCATISISPGGTAFQGALDEVNPGDVIELGHGDYWEDLKTRTDGTADMPITIRGAAGTDDRENVVLRGDGTSSRVLEIKHDYYIIEGFTVDGDAEDDPKRNSDSDSAEDMWRDILIYAIADREPTERDGGYVSTLDGLVIRNMKLANAGGECVRLRDHVTYAEVHHNNITDCGIYDFR 197
            MSSSLL+PLL + C SFYGQCATISI+PGGTAFQ ALD VNPGDVIELG+GDYWEDLKTRTDGT DMPITIRGA GTDDRENVVLRG GTS+RVLEIKHDYYI+E FTV+GDAEDDP R++DSDS EDMWRD+LIYA+A+REPTERDGGYVS +DGLVIRNM + NAGGEC+RLRDHVTYAEV+ N I DCGIYD+R
Sbjct:    7 MSSSLLVPLLFICCLSFYGQCATISITPGGTAFQDALDVVNPGDVIELGNGDYWEDLKTRTDGTVDMPITIRGAGGTDDRENVVLRGAGTSTRVLEIKHDYYIVEDFTVNGDAEDDPDRDADSDSPEDMWRDVLIYAVANREPTERDGGYVSAIDGLVIRNMAVTNAGGECIRLRDHVTYAEVYSNYIIDCGIYDYR 203          
BLAST of mRNA_Ecto-sp9_F_contig1089.769.1 vs.
Match: Putative (nosD copper-binding protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FIS4_ECTSI)

HSP 1 Score: 283 bits (724), Expect = 1.200e-90
Identity = 138/141 (97.87%), Postives = 139/141 (98.58%), Query Frame = 0
Query:   36 ALDEVNPGDVIELGHGDYWEDLKTRTDGTADMPITIRGAAGTDDRENVVLRGDGTSSRVLEIKHDYYIIEGFTVDGDAEDDPKRNSDSDSAEDMWRDILIYAIADREPTERDGGYVSTLDGLVIRNMKLANAGGECVRLRD 176
            ALDEVNPGDVIELGHGDYWEDLKTRTDGTADMPITIRGAAGTDDRENVVLRGDGTSSRVLEIKHDYYIIE FTVDGDAEDDP RNSDSDSAEDMWRDILIYAIADREPTERDGGYVSTLDGLVIRNMKLANAGGEC+RLRD
Sbjct:   19 ALDEVNPGDVIELGHGDYWEDLKTRTDGTADMPITIRGAAGTDDRENVVLRGDGTSSRVLEIKHDYYIIEDFTVDGDAEDDPNRNSDSDSAEDMWRDILIYAIADREPTERDGGYVSTLDGLVIRNMKLANAGGECIRLRD 159          
BLAST of mRNA_Ecto-sp9_F_contig1089.769.1 vs.
Match: EsV-1-164 (n=2 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FN05_ECTSI)

HSP 1 Score: 230 bits (586), Expect = 1.670e-74
Identity = 113/141 (80.14%), Postives = 123/141 (87.23%), Query Frame = 0
Query:    3 SSLLLPLLLLGCSSFYGQCATISISPGGTAFQGALDEVNPGDVIELGHGDYWEDLKTRTDGTADMPITIRGAAGTDDRENVVLRGDGTSSRVLEIKHDYYIIEGFTVDGDAEDDPKRNSDSDSAEDMWRDILIYAIADREP 143
            S LLLPLL LG S+F GQCATISISPGGTAFQ ALDEVNPGDVIE+GHGDYWED+KT  DGTADMPITIRGA GTDDR+NVVLRGDGTSSRV E+KHDYYIIE FTV+GDAEDDP R + SDS +++WRDILIYA   R P
Sbjct:    2 SPLLLPLLFLGFSTFCGQCATISISPGGTAFQDALDEVNPGDVIEIGHGDYWEDIKTTIDGTADMPITIRGAGGTDDRDNVVLRGDGTSSRVFEVKHDYYIIEDFTVNGDAEDDPDRGTGSDSIKELWRDILIYATGRRFP 142          
BLAST of mRNA_Ecto-sp9_F_contig1089.769.1 vs.
Match: EsV-1-164 (n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FN06_ECTSI)

HSP 1 Score: 184 bits (466), Expect = 9.720e-57
Identity = 87/102 (85.29%), Postives = 93/102 (91.18%), Query Frame = 0
Query:   36 ALDEVNPGDVIELGHGDYWEDLKTRTDGTADMPITIRGAAGTDDRENVVLRGDGTSSRVLEIKHDYYIIEGFTVDGDAEDDPKRNSDSDSAEDMWRDILIYA 137
            ALDEVNPGDVIELGHGDYWEDLKT  DGTADMPITIRGA GTDDR+NVVLRGDGTSSRV E+KHDYYIIE FTV+GDAEDDP R S SDS +++WRDILIYA
Sbjct:    6 ALDEVNPGDVIELGHGDYWEDLKTTIDGTADMPITIRGAGGTDDRDNVVLRGDGTSSRVFEVKHDYYIIEDFTVNGDAEDDPDRGSGSDSIKELWRDILIYA 107          
BLAST of mRNA_Ecto-sp9_F_contig1089.769.1 vs.
Match: Beta_helix (domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JK02_9PHAE)

HSP 1 Score: 122 bits (306), Expect = 1.020e-28
Identity = 67/185 (36.22%), Postives = 104/185 (56.22%), Query Frame = 0
Query:   19 GQCATISISPGGTAFQGALDEVNPGDVIELGHGDYWEDLKTRTDGTADMPITIRGAAGTDDRENVVLRGDGTSSRVLEIKHDYYIIEGFTVDGDAEDDPKRNSDSDSAEDMWRDILIYAIADREP----TERDGGYVSTLDGLVIRNMKLANAGGECVRLRDHVTYAEVHHNNITDCGIYDFRFE 199
            G   T+++  G  + Q ALD  +PG  I +  G Y E LK+R DGT + PIT++G +        +++G   S   +EI HDYY++  FT+DG  ++D  +    D+  + +R   +    +R+P     E+   Y S +DG+VI+NMK+ N GGE +R+R  VT   + HN IT  G YDF+F+
Sbjct:  358 GSGGTVTVKEG-ESIQAALDAASPGTTILIEAGTYHEALKSRVDGTKEQPITLQGPSSG---PTAIIKGSDKSGTCVEINHDYYVLNDFTIDGLIKEDCNK----DNVRECFRAKCLAVRGNRQPRDHTNEKGVAYKSAVDGVVIKNMKIYNCGGEGIRIRYFVTNCVLFHNRITSTGCYDFKFD 534          
BLAST of mRNA_Ecto-sp9_F_contig1089.769.1 vs.
Match: Uncharacterized (protein n=4 Tax=Rhizobium TaxID=379 RepID=J3BM99_9HYPH)

HSP 1 Score: 114 bits (284), Expect = 8.360e-27
Identity = 76/188 (40.43%), Postives = 99/188 (52.66%), Query Frame = 0
Query:   14 CSSFYGQ--CATISISPGGT-AFQGALDEVNPGDVIELGHGDYWEDLKTRTDGTADMPITIRGAAGTDDRENVVLRGDGTSSRVLEIKHDYYIIEGFTVDGDAEDDPKRNSDSDSAEDMWRDILIYAIADREPTERDGGYVSTLDGLVIRNMKLANAGGECVRLRDHVTYAEVHHNNITDCGIYDFRF 198
            C++F       TI +SP  T   Q AL+   PGDVI L  G Y+ED KT  +G    PI I G        + V+RG G +SRV+EI HDY  + GFTVDG           + + +  +RD LIY I     T  DG     + GL I NM + NAGGEC+RLR      E+ ++ I++CG YDF F
Sbjct:   20 CAAFASASFATTIDVSPSPTHGIQAALNRAQPGDVIRLRPGVYYEDFKTVRNGRPGKPIVITGP------RSAVIRGSG-ASRVIEINHDYTELRGFTVDG--------KFGAGNTKGSYRDKLIYVIG---KTRGDG-----VTGLRILNMSVKNAGGECIRLRYQTRRNEIAYSQISNCGRYDFAF 184          
BLAST of mRNA_Ecto-sp9_F_contig1089.769.1 vs.
Match: hypothetical (protein n=2 Tax=Rhizobium TaxID=379 RepID=UPI001CB76FF2)

HSP 1 Score: 113 bits (283), Expect = 1.240e-26
Identity = 76/194 (39.18%), Postives = 104/194 (53.61%), Query Frame = 0
Query:   13 GCSSFYGQ--CATISISPG--GTAFQG---ALDEVNPGDVIELGHGDYWEDLKTRTDGTADMPITIRGAAGTDDRENVVLRGDGTSSRVLEIKHDYYIIEGFTVDGDAEDDPKRNSDSDSAEDMWRDILIYAIADREPTERDGGYVSTLDGLVIRNMKLANAGGECVRLRDHVTYAEVHHNNITDCGIYDFRFE 199
            GC++F      ATI +SP   GT  QG   AL+   PGDVI L  G Y+ED KT  DG +  PI I G        + +++G G + R++EI HDY  + GFTVDG           + + +  +RD LIY I     T  +G     + GL I NM + NAGGEC+RLR      E+ ++ I++CG YDF F+
Sbjct:   19 GCAAFASASLAATIDVSPSPSGTRAQGIQAALNRAEPGDVIRLKPGVYYEDFKTVRDGRSGKPIVITGP------RSAIIKGGG-APRIIEINHDYTELRGFTVDG--------KFGAGNTKGSYRDKLIYVIG---KTRGNG-----VTGLRILNMSVKNAGGECIRLRYQTRQNEIAYSQISNCGRYDFAFK 189          
BLAST of mRNA_Ecto-sp9_F_contig1089.769.1 vs.
Match: EsV-1-164 (n=1 Tax=Ectocarpus siliculosus virus 1 (isolate New Zealand/Kaikoura/1988) TaxID=654926 RepID=Q8QKV2_ESV1K)

HSP 1 Score: 116 bits (290), Expect = 1.410e-26
Identity = 73/180 (40.56%), Postives = 98/180 (54.44%), Query Frame = 0
Query:   22 ATISISPGGTAFQGALDEVNPGDVIELGHGDYWEDLKTRTDGTADMPITIRGAAGTDDRENVVLRGDGTSSRVLEIKHDYYIIEGFTVDGDAEDDPKRNSDSDSAEDMWRDILIYAIADREPTERDG---GYVSTLDGLVIRNMKLANAGGECVRLRDHVTYAEVHHNNITDCGIYDFRF 198
            A +++ PG  + Q AL+   PGD IEL  G+Y EDL T  DG  D  I I G+       + VLRG G  +R+ ++ H Y  ++GFT+DG         S +  AE  ++D+LIY  A RE  E +     + S  DG++I NMKL  A GECVR R  V+  E+    I DCGI DF F
Sbjct:   17 AVLTVDPG-QSIQAALELAQPGDTIELKDGEYREDLTTVRDGEPDKRIIITGS------RDAVLRGGGKEARLFQVMHSYITLDGFTIDG-------LLSGNGDAETDYQDMLIYITAHRETREIEQYGTKFRSAQDGVIISNMKLERALGECVRARYFVSNLEIFGCEIADCGIGDFVF 182          
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp9_F_contig1089.769.1 vs.
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Ectocarpus species9 EcSCA_722f female vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
Uncharacterized2.430e-11284.26protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=... [more]
Beta_helix6.150e-11281.73domain-containing protein n=1 Tax=Ectocarpus sp. C... [more]
Uncharacterized1.780e-10982.74protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=... [more]
Putative1.200e-9097.87nosD copper-binding protein n=1 Tax=Ectocarpus sil... [more]
EsV-1-1641.670e-7480.14n=2 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7... [more]
EsV-1-1649.720e-5785.29n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7... [more]
Beta_helix1.020e-2836.22domain-containing protein n=1 Tax=Ectocarpus sp. C... [more]
Uncharacterized8.360e-2740.43protein n=4 Tax=Rhizobium TaxID=379 RepID=J3BM99_9... [more]
hypothetical1.240e-2639.18protein n=2 Tax=Rhizobium TaxID=379 RepID=UPI001CB... [more]
EsV-1-1641.410e-2640.56n=1 Tax=Ectocarpus siliculosus virus 1 (isolate Ne... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0 of Ectocarpus species9 EcSCA_722f female
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR012334Pectin lyase foldGENE3D2.160.20.10coord: 30..198
e-value: 2.6E-21
score: 78.1
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 20..200
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_H_REGIONSignal peptide H-regioncoord: 4..14
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDESignal Peptidecoord: 1..19
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_C_REGIONSignal peptide C-regioncoord: 15..19
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_N_REGIONSignal peptide N-regioncoord: 1..3
NoneNo IPR availableSIGNALP_EUKSignalP-noTMSignalP-noTMcoord: 1..21
score: 0.756
IPR011050Pectin lyase fold/virulence factorSUPERFAMILY51126Pectin lyase-likecoord: 30..192

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp9_F_contig1089contigEcto-sp9_F_contig1089:3..4304 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Ectocarpus species9 EcSCA_722f female2022-09-29
Diamond blastp: OGS1.0 of Ectocarpus species9 EcSCA_722f female vs UniRef902022-09-16
OGS1.0 of Ectocarpus species9 EcSCA_722f female2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp9_F_contig1089.769.1mRNA_Ecto-sp9_F_contig1089.769.1Ectocarpus species9 EcSCA_722f femalemRNAEcto-sp9_F_contig1089 3..4304 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp9_F_contig1089.769.1 ID=prot_Ecto-sp9_F_contig1089.769.1|Name=mRNA_Ecto-sp9_F_contig1089.769.1|organism=Ectocarpus species9 EcSCA_722f female|type=polypeptide|length=200bp
MSSSLLLPLLLLGCSSFYGQCATISISPGGTAFQGALDEVNPGDVIELGH
GDYWEDLKTRTDGTADMPITIRGAAGTDDRENVVLRGDGTSSRVLEIKHD
YYIIEGFTVDGDAEDDPKRNSDSDSAEDMWRDILIYAIADREPTERDGGY
VSTLDGLVIRNMKLANAGGECVRLRDHVTYAEVHHNNITDCGIYDFRFEC
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR012334Pectin_lyas_fold
IPR011050Pectin_lyase_fold/virulence