mRNA_Ecto-sp9_F_contig1084.729.1 (mRNA) Ectocarpus species9 EcSCA_722f female
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Overview
Homology
BLAST of mRNA_Ecto-sp9_F_contig1084.729.1 vs.
Match: Protein (kinase domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5KV29_9PHAE) HSP 1 Score: 1234 bits (3194), Expect = 0.000e+0 Identity = 687/773 (88.87%), Postives = 696/773 (90.04%), Query Frame = 1
Query: 1 MPNGGKPRERVAGTAAPGASAGLPAPWAKRSIGRLVERISLKLGNNDVMATAGAAAGRDGDGG-RRGQYVRTFEEEHPCKQPLLVKSFDGDVAAGRPTDLPGEFIGDRRRSDSWKADDAAEQGRYDAAEARGYGLYSLHAVLGQGTFGRIHLASWRHRGGGLDAAASSPASLEDRPSSRGGAGGAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSASEALSVGFRGAAVAGAGTRRADGHRTSRSIRHLAGSGRSAGRNNNNGSSGGRSNTRHRSLFSEDGEVWTGWGGEGGAARLRLRALKSVCKRKVTEKGLVRHMETELAVLKQCSHPFIVSLSPGGQFQTSRHLHLVLNYCPGGDLFSLLARVGRLPEAKVRVCAAQLALALRHLHSKHIAYRDLKPDNVCIDARGHAVLVDFSLARTGLDVAPDGKTFTFCGSAAYAAPEIITKEGHDTRVDLWSLGCVVFEALVGEHPFRRPRGEKADHRHQTQALFDRIQRGRLEYPKSLSAPSLSLLRGLLSLNPDDRPGFSSFPPTXXXXXXXXXXXXXXXXXXXXXXXXXATTTLAPAXXXAPPTDSEQPVAD-VRKGRCSGDTHGEVAGTAPSEAGGAPPLCLKNEAGVRGGAAXXXXRKPMAQQSASSAWTASPGGARARIANCGERPPVLLLEHVFFKGLPGWGGPGTGGAWEDAKLEGSAVAVPALCDALDVRHFDSRFTNQDVELSLQGHPHKGGPTPAFEDFEWREDSCIEYAQVAERSTPGLLESLASALWC 2313
MPNGG+ RERVAGTAAPGAS GL P AKRSIGRLVERISLKLGNNDVM TAGAAA RDGDGG RRGQYVRTFE+EHPCKQPLLVKSFDGDVAAGRP LPGEFIGD RRSDSWK D AAEQGRYDAAEARGYGLYSLHAVLGQGTFGRIHLASWRHRGGGL A ASSPASL+DRPS RGG XXXXXXXXXXXXXX ASEAL VGF GAA AGAGTRRADGHRT RSIR+LAGSGRSAGRNNNN SSGGRS+TRHRSL SEDGEVWTG GGEGG ARLRLRALKSVCKRKVTEKGLVRHMETELAVLKQCSHPFIVSLSPGGQFQTS HLHLVLNYCPGGDLFSLLARVGRLPEA+V+VCAAQLALALRHLHSKHIAYRDLKPDNVCIDARGHAVLVDFSLARTGLD APDGKTFTFCGSAAYAAPEIITKEGHDTRVDLWSLGCVVFEALVGEHPFRRPRGEKADHRHQTQALFDRIQRGRLEYPKSLSAPSLSLLRGLLSLNPDDRPGFSSFPPT XXXXXXXXXXXXXXXXXXXX TTTLAPA APPTDSEQPVAD V KGRCSGDTHGEVAGTAPS AGGAPPLCL NEAGVRGGA XXXX S SSA TASPGGARAR A+CGERPPVLLLEHVFFKGLPGWGGPGTGGAWEDAKLEGSAVAVPALCD LDVRHFDSRFT+Q VELSLQGHPHKGGPTPAFEDFEWREDSCIEYAQ AERSTPGLLESLASALWC
Sbjct: 1 MPNGGRARERVAGTAAPGASLGLSTPSAKRSIGRLVERISLKLGNNDVMETAGAAAARDGDGGGRRGQYVRTFEDEHPCKQPLLVKSFDGDVAAGRPAGLPGEFIGDHRRSDSWKIDGAAEQGRYDAAEARGYGLYSLHAVLGQGTFGRIHLASWRHRGGGLAATASSPASLDDRPSPRGGXXXXXXXXXXXXXXXXXXTTPRARYRISRAAATAGEGPASEALPVGFSGAAAAGAGTRRADGHRTRRSIRYLAGSGRSAGRNNNNCSSGGRSDTRHRSLLSEDGEVWTGPGGEGGGARLRLRALKSVCKRKVTEKGLVRHMETELAVLKQCSHPFIVSLSPGGQFQTSGHLHLVLNYCPGGDLFSLLARVGRLPEAQVKVCAAQLALALRHLHSKHIAYRDLKPDNVCIDARGHAVLVDFSLARTGLDAAPDGKTFTFCGSAAYAAPEIITKEGHDTRVDLWSLGCVVFEALVGEHPFRRPRGEKADHRHQTQALFDRIQRGRLEYPKSLSAPSLSLLRGLLSLNPDDRPGFSSFPPTPXXXXXXXXXXXXXXXXXXXX----VTTTLAPATTTAPPTDSEQPVADDVGKGRCSGDTHGEVAGTAPSGAGGAPPLCLMNEAGVRGGAXXXXXXXXX-XXSPSSARTASPGGARARRASCGERPPVLLLEHVFFKGLPGWGGPGTGGAWEDAKLEGSAVAVPALCDVLDVRHFDSRFTSQAVELSLQGHPHKGGPTPAFEDFEWREDSCIEYAQAAERSTPGLLESLASALWC 768
BLAST of mRNA_Ecto-sp9_F_contig1084.729.1 vs.
Match: Hypothetical (protein n=1 Tax=Trieres chinensis TaxID=1514140 RepID=A0A7S1ZV30_TRICV) HSP 1 Score: 188 bits (478), Expect = 1.040e-48 Identity = 100/229 (43.67%), Postives = 146/229 (63.76%), Query Frame = 1
Query: 907 ALKSVCKRKVTEKGLVRHMETELAVLKQCSHPFIVSLSPGGQFQTSRHLHLVLNYCPGGDLFSLLARVGRLPEAKVRVCAAQLALALRHLHSKHIAYRDLKPDNVCIDARGHAVLVDFSLARTGLDVAPDGKTFTFCGSAAYAAPEIITKEGHDTRVDLWSLGCVVFEALVGEHPFRRPRGEKADHRHQTQALFDRIQRGRLEYPKSLSAPSLSLLRGLLSLNPDDRPG 1593
ALK + K + ++ V H +TE +VL +HPFIV L+ FQ+ L+ VL+YC GG+LF L++VG+ E + R A+++ LA+ ++H I YRDLKP+NV +DA+GH L DF L++ G+ + G T +FCG+ Y APEI+ ++GH VD WSLG +++E L G PF EK LF++I+RG L+YP+SLS+ + SLLRGLL+ +P R G
Sbjct: 74 ALKVLRKDNIIKRNQVEHTKTERSVLGYVNHPFIVGLNMA--FQSKDKLYFVLDYCAGGELFFHLSKVGKFAEPRARFYASEIVLAISYVHELDIIYRDLKPENVLLDAKGHVRLTDFGLSKEGISSSSSGAT-SFCGTPEYLAPEILNRQGHGRAVDWWSLGALLYEMLTGLPPFYCRDREK---------LFEKIRRGHLDYPRSLSSRAQSLLRGLLTKDPKRRLG 290
BLAST of mRNA_Ecto-sp9_F_contig1084.729.1 vs.
Match: AGC/AKT (protein kinase n=2 Tax=Saprolegnia TaxID=4769 RepID=T0QIH2_SAPDV) HSP 1 Score: 189 bits (479), Expect = 1.090e-48 Identity = 99/229 (43.23%), Postives = 138/229 (60.26%), Query Frame = 1
Query: 901 LRALKSVCKRKVTEKGLVRHMETELAVLKQCSHPFIVSLSPGGQFQTSRHLHLVLNYCPGGDLFSLLARVGRLPEAKVRVCAAQLALALRHLHSKHIAYRDLKPDNVCIDARGHAVLVDFSLARTGLDVAPDGKTFTFCGSAAYAAPEIITKEGHDTRVDLWSLGCVVFEALVGEHPFRRPRGEKADHRHQTQALFDRIQRGRLEYPKSLSAPSLSLLRGLLSLNPDDR 1587
L A+KS+ KRK+ VR + E +L SHPF++ + G F+T H H VL YCPGGD++SLL ++PEA+V + + AL +LH H+AYRDLKP+N+ +DA+G+ L DF LA+ L P T++FCGS Y APE+I G+ D+WSLGCVVFE L G PF RG + LFD+I +G++ YP LS ++ L+ L L+P +R
Sbjct: 100 LYAIKSIDKRKICGDEAVRLL-VERQILSTASHPFVIRMD--GAFETPTHYHFVLEYCPGGDMYSLLEATPQMPEARVIFYTSSIVSALVYLHHAHVAYRDLKPENILLDAKGYVRLADFGLAKQALS--PTDTTYSFCGSVDYMAPEVILGVGYGLPADVWSLGCVVFEMLTGLPPFYTTRGRRV--------LFDKIVKGQVLYPTYLSPDAVRFLQRCLDLDPKER 315
BLAST of mRNA_Ecto-sp9_F_contig1084.729.1 vs.
Match: Hypothetical (protein n=1 Tax=Minutocellus polymorphus TaxID=265543 RepID=A0A7S0FKL0_9STRA) HSP 1 Score: 191 bits (486), Expect = 1.620e-48 Identity = 102/229 (44.54%), Postives = 145/229 (63.32%), Query Frame = 1
Query: 907 ALKSVCKRKVTEKGLVRHMETELAVLKQCSHPFIVSLSPGGQFQTSRHLHLVLNYCPGGDLFSLLARVGRLPEAKVRVCAAQLALALRHLHSKHIAYRDLKPDNVCIDARGHAVLVDFSLARTGLDVAPDGKTFTFCGSAAYAAPEIITKEGHDTRVDLWSLGCVVFEALVGEHPFRRPRGEKADHRHQTQALFDRIQRGRLEYPKSLSAPSLSLLRGLLSLNPDDRPG 1593
ALK + K + ++ V H +TE VL HPFIV L+ FQ+ L+ VL+YC GG+LF L++VG+ PE + R A+++ LA+ ++H I YRDLKP+NV +DARGH L DF L++ G+ + G T +FCG+ Y APEI+ ++GH VD WSLG +++E L G PF EK LF++I++G LEYP+SLS S++LLRGLL+ +P R G
Sbjct: 205 ALKVLRKDNIVKRNQVEHTKTERNVLGYVKHPFIVGLNMA--FQSKDKLYFVLDYCAGGELFFHLSKVGKFPEPRARFYASEIVLAISYVHELDIIYRDLKPENVLLDARGHVRLTDFGLSKEGISSSSSGAT-SFCGTPEYLAPEILNRQGHGRAVDWWSLGALLYEMLTGLPPFYCRDREK---------LFEKIRKGHLEYPRSLSPRSVNLLRGLLTKDPRRRLG 421
BLAST of mRNA_Ecto-sp9_F_contig1084.729.1 vs.
Match: Uncharacterized (protein n=1 Tax=Phytophthora ramorum TaxID=164328 RepID=H3G5D8_PHYRM) HSP 1 Score: 185 bits (469), Expect = 1.800e-48 Identity = 99/232 (42.67%), Postives = 139/232 (59.91%), Query Frame = 1
Query: 898 RLRALKSVCKRKVTEKGLVRHMETELAVLKQCSHPFIVSLSPGGQFQTSRHLHLVLNYCPGGDLFSLLARVGRLPEAKVRVCAAQLALALRHLHSKHIAYRDLKPDNVCIDARGHAVLVDFSLARTGLDVAPDGKTFTFCGSAAYAAPEIITKEGHDTRVDLWSLGCVVFEALVGEHPFRRPRGEKADHRHQTQALFDRIQRGRLEYPKSLSAPSLSLLRGLLSLNPDDRPG 1593
+L A+K + K + +K V H TE VL SHPF+V L FQT L+ VL+YCPGGD+F L+R G PEA + AA++ LAL HLH + I YRDLKP+N+ +D GH L DF LA+ G+ +G T+T CG+ Y PEI+ + GH T VD W+LG V++E L G P+ + Q LF+R++ LE+P+ LS +++L+ GLL+ +P R G
Sbjct: 31 QLFAVKILSKPAIVKKQQVEHTRTERRVLASVSHPFVVCLHYA--FQTKDKLYFVLDYCPGGDMFFHLSRCGCFPEAMAKFYAAEIVLALIHLHEQGIVYRDLKPENIMLDVDGHVKLADFGLAKEGITSELNG-TYTMCGTPEYLPPEILNRAGHGTAVDWWNLGMVLYEMLTGRPPW---------YTQDRQELFNRLRGAELEFPQGLSPEAMNLIEGLLTRDPAKRLG 250
BLAST of mRNA_Ecto-sp9_F_contig1084.729.1 vs.
Match: cAMP-dependent (protein kinase n=1 Tax=Lingulodinium polyedra TaxID=160621 RepID=Q39908_LINPO) HSP 1 Score: 181 bits (460), Expect = 7.110e-47 Identity = 99/235 (42.13%), Postives = 137/235 (58.30%), Query Frame = 1
Query: 883 GAARLRLRALKSVCKRKVTEKGLVRHMETELAVLKQCSHPFIVSLSPGGQFQTSRHLHLVLNYCPGGDLFSLLARVGRLPEAKVRVCAAQLALALRHLHSKHIAYRDLKPDNVCIDARGHAVLVDFSLARTGLDVAPDGKTFTFCGSAAYAAPEIITKEGHDTRVDLWSLGCVVFEALVGEHPFRRPRGEKADHRHQTQALFDRIQRGRLEYPKSLSAPSLSLLRGLLSLNPDDR 1587
GA RL A+K + K V ++ V H +TE +VL+ SHPFIV+L FQT + L++V+ YCPGG+LF L+R GR E + R A+ + A+ +LH ++ YRDLKP+N+ ID GHA + DF L + G+ + T CG+ Y APEI+ K+GH VD +S+G + +E L G PF + Q LFDRI+RG L YP +S + LR LL NPD R
Sbjct: 28 GAQDNRLYAMKMLRKENVIKRNQVEHTKTERSVLETVSHPFIVTLHYA--FQTPKKLYMVMEYCPGGELFFHLSRAGRFSEGRTRFYVAETSSAVAYLHQLNVIYRDLKPENLLIDGEGHAKITDFGLRKEGIQ--DNHSAMTMCGTPEYLAPEILDKKGHGKAVDWYSVGALTYEMLTGLPPF---------YTKDLQKLFDRIRRGELTYPDYVSVLAKEFLRALLQRNPDAR 249
BLAST of mRNA_Ecto-sp9_F_contig1084.729.1 vs.
Match: Uncharacterized (protein n=1 Tax=Thalassiosira pseudonana TaxID=35128 RepID=B8C3Y1_THAPS) HSP 1 Score: 180 bits (457), Expect = 1.090e-46 Identity = 99/229 (43.23%), Postives = 140/229 (61.14%), Query Frame = 1
Query: 907 ALKSVCKRKVTEKGLVRHMETELAVLKQCSHPFIVSLSPGGQFQTSRHLHLVLNYCPGGDLFSLLARVGRLPEAKVRVCAAQLALALRHLHSKHIAYRDLKPDNVCIDARGHAVLVDFSLARTGLDVAPDGKTFTFCGSAAYAAPEIITKEGHDTRVDLWSLGCVVFEALVGEHPFRRPRGEKADHRHQTQALFDRIQRGRLEYPKSLSAPSLSLLRGLLSLNPDDRPG 1593
ALK + K + ++ V H +TE +VL HPFIV L+ FQ+ L+ VL+YC GG+LF L +VG+ E + AA++ LA+ ++HS I YRDLKP+NV +D+RGH L DF L++ G+ + G +FCG+ Y APEI+ ++GH VD WSLG +++E L G PF EK LF++I++G LEYPK LS + LLRGLL+ +P R G
Sbjct: 26 ALKVLKKDNIIKRNQVEHTKTERSVLGYVKHPFIVGLNMA--FQSKDKLYFVLDYCAGGELFFHLGKVGKFSEHRACFYAAEITLAISYVHSLDIVYRDLKPENVLLDSRGHVRLTDFGLSKEGISNSSSGAN-SFCGTPEYLAPEILNRQGHGRAVDWWSLGALLYEMLTGLPPFYCRDREK---------LFEKIRKGTLEYPKYLSPRATLLLRGLLTKDPRRRLG 242
BLAST of mRNA_Ecto-sp9_F_contig1084.729.1 vs.
Match: Hypothetical (protein n=1 Tax=Alexandrium catenella TaxID=2925 RepID=A0A7S1KYX8_ALECA) HSP 1 Score: 181 bits (459), Expect = 1.600e-46 Identity = 96/235 (40.85%), Postives = 142/235 (60.43%), Query Frame = 1
Query: 898 RLRALKSVCKRKVTEKGLVRHMETELAVLKQCSHPFIVSLSPGGQFQTSRHLHLVLNYCPGGDLFSLLARVGRLPEAKVRVCAAQLALALRHLHSKHIAYRDLKPDNVCIDARGHAVLVDFSLARTGLDVAPDGKTFTFCGSAAYAAPEIITKEGHDTRVDLWSLGCVVFEALVGEHPFRRPRGEKADHRHQTQALFDRIQRGRLEYPKSLSAPSLSLLRGLLSLNPDDRPGFSS 1602
++ A+K + K V ++ V H +TE AVL+ SHPFIV+L+ FQT + L++V+ YCPGG+LF L+R GR E K R A+ + A+ +LH ++ YRDLKP+N+ IDA GH + DF L++ G++ + T CG+ Y APEI+ KEGH VD +S+G + +E L G P+ +K LF+RI+RG L+YP ++ + L+ LL NPD R G S+
Sbjct: 56 KMYAMKMLRKENVIKRNQVEHTKTERAVLETVSHPFIVTLNYA--FQTPKKLYMVMEYCPGGELFFHLSRAGRFTEGKTRFYIAETSSAVAYLHKLNVIYRDLKPENLLIDAEGHVKITDFGLSKEGIE--DNHSAMTMCGTPEYLAPEILDKEGHGKAVDWYSIGALTYEMLTGLPPYYTKDRQK---------LFERIRRGDLQYPDYVTPLAKGFLQALLQRNPDRRLGGSA 277
BLAST of mRNA_Ecto-sp9_F_contig1084.729.1 vs.
Match: Hypothetical (protein n=1 Tax=Eucampia antarctica TaxID=49252 RepID=A0A7S2RK96_9STRA) HSP 1 Score: 189 bits (479), Expect = 1.940e-46 Identity = 101/229 (44.10%), Postives = 145/229 (63.32%), Query Frame = 1
Query: 907 ALKSVCKRKVTEKGLVRHMETELAVLKQCSHPFIVSLSPGGQFQTSRHLHLVLNYCPGGDLFSLLARVGRLPEAKVRVCAAQLALALRHLHSKHIAYRDLKPDNVCIDARGHAVLVDFSLARTGLDVAPDGKTFTFCGSAAYAAPEIITKEGHDTRVDLWSLGCVVFEALVGEHPFRRPRGEKADHRHQTQALFDRIQRGRLEYPKSLSAPSLSLLRGLLSLNPDDRPG 1593
ALK + K + ++ V H TE +VL HPFIV L+ FQ++ L+ VL+YC GG+LF L++VG+ E + R AA++ LA+ ++HS I YRDLKP+NV +DARGH L DF L++ G+ + G +FCG+ Y APEI+ ++GH VD WSLG +++E L G PF EK LF++I++G L+YP+SLSA S ++LRGLL+ +P R G
Sbjct: 356 ALKVLRKDNIIKRNQVEHTRTERSVLGYVRHPFIVGLNMA--FQSNDKLYFVLDYCAGGELFFHLSKVGKFAEPRARFYAAEITLAIEYVHSLDIIYRDLKPENVLLDARGHVRLTDFGLSKEGISSSSSGAN-SFCGTPEYLAPEILNRQGHGRAVDWWSLGALLYEMLTGLPPFYCRDREK---------LFEKIRKGHLDYPRSLSARSQNMLRGLLTKDPRRRLG 572
BLAST of mRNA_Ecto-sp9_F_contig1084.729.1 vs.
Match: AGC (protein kinase n=2 Tax=Aphanomyces astaci TaxID=112090 RepID=W4FHU1_9STRA) HSP 1 Score: 185 bits (470), Expect = 2.130e-46 Identity = 101/232 (43.53%), Postives = 140/232 (60.34%), Query Frame = 1
Query: 898 RLRALKSVCKRKVTEKGLVRHMETELAVLKQCSHPFIVSLSPGGQFQTSRHLHLVLNYCPGGDLFSLLARVGRLPEAKVRVCAAQLALALRHLHSKHIAYRDLKPDNVCIDARGHAVLVDFSLARTGLDVAPDGKTFTFCGSAAYAAPEIITKEGHDTRVDLWSLGCVVFEALVGEHPFRRPRGEKADHRHQTQALFDRIQRGRLEYPKSLSAPSLSLLRGLLSLNPDDRPG 1593
+L A+K++ K V + V H TE VL HP+IV L FQT + L+ V++YCPGG+LF L+R+ R PEA V AA++ LAL HLHS + YRDLKP+N+ DA GH +L DF LA+ G+ +G T + CG+ Y PEI+ + GH T VD W+LG V++E L G P+ +K LFDR++ L +P +SAP+ SL+ GLL+ NP +R G
Sbjct: 189 KLYAMKTLNKSNVKRRNQVEHTRTERRVLGFGKHPYIVHLHYA--FQTKQKLYFVIDYCPGGELFFHLSRMERFPEAMAMVYAAEITLALDHLHSLGVVYRDLKPENILFDAVGHVLLADFGLAKEGITDGAEG-TNSMCGTPEYLPPEILDRVGHGTSVDWWALGMVLYEMLTGLPPWYTRNRQK---------LFDRVRHAPLTFPNYVSAPAQSLIAGLLNRNPVERLG 408 The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp9_F_contig1084.729.1 vs.
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Ectocarpus species9 EcSCA_722f female vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_Ecto-sp9_F_contig1084.729.1 >prot_Ecto-sp9_F_contig1084.729.1 ID=prot_Ecto-sp9_F_contig1084.729.1|Name=mRNA_Ecto-sp9_F_contig1084.729.1|organism=Ectocarpus species9 EcSCA_722f female|type=polypeptide|length=772bp MPNGGKPRERVAGTAAPGASAGLPAPWAKRSIGRLVERISLKLGNNDVMAback to top mRNA from alignment at Ecto-sp9_F_contig1084:6015..14495+ Legend: CDSpolypeptideUTR Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_Ecto-sp9_F_contig1084.729.1 ID=mRNA_Ecto-sp9_F_contig1084.729.1|Name=mRNA_Ecto-sp9_F_contig1084.729.1|organism=Ectocarpus species9 EcSCA_722f female|type=mRNA|length=8481bp|location=Sequence derived from alignment at Ecto-sp9_F_contig1084:6015..14495+ (Ectocarpus species9 EcSCA_722f female)back to top Coding sequence (CDS) from alignment at Ecto-sp9_F_contig1084:6015..14495+ >mRNA_Ecto-sp9_F_contig1084.729.1 ID=mRNA_Ecto-sp9_F_contig1084.729.1|Name=mRNA_Ecto-sp9_F_contig1084.729.1|organism=Ectocarpus species9 EcSCA_722f female|type=CDS|length=4632bp|location=Sequence derived from alignment at Ecto-sp9_F_contig1084:6015..14495+ (Ectocarpus species9 EcSCA_722f female)back to top |