prot_Ecto-sp9_F_contig1076.661.1 (polypeptide) Ectocarpus species9 EcSCA_722f female

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp9_F_contig1076.661.1
Unique Nameprot_Ecto-sp9_F_contig1076.661.1
Typepolypeptide
OrganismEctocarpus species9 EcSCA_722f female (Ectocarpus species9 EcSCA_722f female)
Sequence length358
Homology
BLAST of mRNA_Ecto-sp9_F_contig1076.661.1 vs.
Match: 18S (rRNA aminocarboxypropyltransferase n=2 Tax=Ectocarpus TaxID=2879 RepID=D7G294_ECTSI)

HSP 1 Score: 462 bits (1190), Expect = 5.690e-161
Identity = 275/283 (97.17%), Postives = 275/283 (97.17%), Query Frame = 0
Query:    1 MERDRPLKGKXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXHAQGDSGRRNGGAAREMIDRERDESGELAQSITVSLRMWDFEQCDVKKCTGRKLCRLGLVREMELGAPFSGLVLSPNGELTVSPADREVVETLGMSVIDCSWARLDEIPFHQMRRGHHRLLPFLVAANPVNYGKPMKLTCAEAIAATLYIVGHQDEAVKVMDQFGWGAEFLRVNEDVLETYAACADGAEVVKAQAAFLARCEEEAISRRDAVSMEDMMPPSYSDEEEYGNDGSEN 283
            MERDRPLKGKXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX     HAQGDS RRNGGAAREMIDRERDESGELAQSITVSLRMWDFEQCDVKKCTGRKLCRLGLVREMELGAPFSGLVLSPNGELTVSPADREVVETLGMSVIDCSWARLDEIPFHQMRRGHHRLLPFLVAANPVNYGKPMKLTCAEAIAATLYIVGHQDEAVKVMDQFGWGAEFLRVNEDVLETYAACADGAEVVKAQAAFLARCEEEA SRRDAVSMEDMMPPSYSDEEEYGN GSEN
Sbjct:    1 MERDRPLKGKXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX-----HAQGDSWRRNGGAAREMIDRERDESGELAQSITVSLRMWDFEQCDVKKCTGRKLCRLGLVREMELGAPFSGLVLSPNGELTVSPADREVVETLGMSVIDCSWARLDEIPFHQMRRGHHRLLPFLVAANPVNYGKPMKLTCAEAIAATLYIVGHQDEAVKVMDQFGWGAEFLRVNEDVLETYAACADGAEVVKAQAAFLARCEEEANSRRDAVSMEDMMPPSYSDEEEYGNHGSEN 278          
BLAST of mRNA_Ecto-sp9_F_contig1076.661.1 vs.
Match: 18S (rRNA aminocarboxypropyltransferase n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YJ70_9STRA)

HSP 1 Score: 311 bits (796), Expect = 3.600e-101
Identity = 148/223 (66.37%), Postives = 181/223 (81.17%), Query Frame = 0
Query:   58 NGGAAREMIDRERDESGELAQSITVSLRMWDFEQCDVKKCTGRKLCRLGLVREMELGAPFSGLVLSPNGELTVSPADREVVETLGMSVIDCSWARLDEIPFHQMRRGHHRLLPFLVAANPVNYGKPMKLTCAEAIAATLYIVGHQDEAVKVMDQFGWGAEFLRVNEDVLETYAACADGAEVVKAQAAFLARCEEEAISRRDAVSMEDMMPPSYSDEEEYGNDG 280
            +GG A E  D +   +   A+ + V LRMWDFEQCD K+CTGR+LCRLG ++EM+LGAPF GLVLSPNGE TVSP DRE+V+TLG+SVIDCSWARLD++PFHQMRRGHHRLLPFLVAANPVNYGKP KLTCAEA+AATL IVG +++   VMDQFGWG EFL++N DVL+ YAAC+ GAEV+ AQAA+LA+CE EA +RR     +DM+PP+Y   +E  ++G
Sbjct:   52 SGGRAAETADEQEGAAAAAAKGLGVRLRMWDFEQCDPKRCTGRRLCRLGFIKEMDLGAPFQGLVLSPNGEKTVSPEDREIVDTLGISVIDCSWARLDDVPFHQMRRGHHRLLPFLVAANPVNYGKPFKLTCAEALAATLVIVGLREQGALVMDQFGWGPEFLKINADVLDRYAACSSGAEVITAQAAYLAQCEAEAAARRRP---DDMLPPAYDSSDEGESEG 271          
BLAST of mRNA_Ecto-sp9_F_contig1076.661.1 vs.
Match: Uncharacterized (protein n=1 Tax=Pythium oligandrum TaxID=41045 RepID=A0A8K1C8Q2_PYTOL)

HSP 1 Score: 255 bits (651), Expect = 1.460e-78
Identity = 125/201 (62.19%), Postives = 156/201 (77.61%), Query Frame = 0
Query:   56 RRNGGAAREMIDRERDESGELAQSITVSLRMWDFEQCDVKKCTGRKLCRLGLVREMELGAPFSGLVLSPNGELTVSPADREVVETLGMSVIDCSWARLDEIPFHQMRRGHHRLLPFLVAANPVNYGKPMKLTCAEAIAATLYIVGHQDEAVKVMDQFGWGAEFLRVNEDVLETYAACADGAEVVKAQAAFLARCEEEAISR 256
            RR+G AA      E  E     +S  V+LRMWDF+QCD K+CTGRK+CRLG V+ M+ G PF G+VLSP GE  VSPAD E+V +LG+SVIDCSWA++ E+P+ Q+R G+HRLLPFLVAAN VNYG+P KLTCAEAIAATLYIVG +DEAV+V+++F WG EFL++N + LE YAAC   A+VV+AQ A+LA CEEE  +R
Sbjct:   32 RRDGAAAPRERGEEETEINFKRRSFPVTLRMWDFQQCDSKRCTGRKMCRLGYVKSMKPGQPFRGIVLSPAGEQAVSPADLEIVTSLGISVIDCSWAKVQELPYKQLRSGYHRLLPFLVAANSVNYGRPHKLTCAEAIAATLYIVGMKDEAVQVLEEFQWGMEFLKINFECLEAYAACETSADVVEAQNAYLAACEEELRAR 232          
BLAST of mRNA_Ecto-sp9_F_contig1076.661.1 vs.
Match: 18S (rRNA aminocarboxypropyltransferase n=1 Tax=Phytophthora sojae (strain P6497) TaxID=1094619 RepID=G4ZJA7_PHYSP)

HSP 1 Score: 251 bits (641), Expect = 1.550e-77
Identity = 123/196 (62.76%), Postives = 152/196 (77.55%), Query Frame = 0
Query:   78 QSITVSLRMWDFEQCDVKKCTGRKLCRLGLVREMELGAPFSGLVLSPNGELTVSPADREVVETLGMSVIDCSWARLDEIPFHQMRRGHHRLLPFLVAANPVNYGKPMKLTCAEAIAATLYIVGHQDEAVKVMDQFGWGAEFLRVNEDVLETYAACADGAEVVKAQAAFLARCEEEAISRRDAVSMEDMMPPSYSDE 273
            ++  V+LRMWDF+QCD K+CTGRKLCRLG ++ M+ GA F GLVLSP GE  VSPADR +VE  G+SVIDCSWA++ E+P+ Q+R G HRLLPFLVAAN VNYG+P KL+CAEAIAATLYIVG +DEAV++MD+F WGAEFL++N D LE YAAC D A+VV AQ A+LA C+ E   R   +    M+P   SD+
Sbjct:   40 RAFPVTLRMWDFQQCDSKRCTGRKLCRLGYIKSMKPGAHFRGLVLSPAGESIVSPADRGIVEGTGISVIDCSWAKVQELPYKQLRSGVHRLLPFLVAANSVNYGRPHKLSCAEAIAATLYIVGLKDEAVQLMDEFSWGAEFLKINADCLEAYAACEDSAQVVAAQEAYLAACQAENEQRLQRM----MLPSLESDD 231          
BLAST of mRNA_Ecto-sp9_F_contig1076.661.1 vs.
Match: 18S (rRNA aminocarboxypropyltransferase n=1 Tax=Pythium insidiosum TaxID=114742 RepID=A0A2D4BYV1_PYTIN)

HSP 1 Score: 251 bits (642), Expect = 2.910e-77
Identity = 129/232 (55.60%), Postives = 169/232 (72.84%), Query Frame = 0
Query:   50 AQGDSGRRNGGAAREMIDRERDES-GELA---QSITVSLRMWDFEQCDVKKCTGRKLCRLGLVREMELGAPFSGLVLSPNGELTVSPADREVVETLGMSVIDCSWARLDEIPFHQMRRGHHRLLPFLVAANPVNYGKPMKLTCAEAIAATLYIVGHQDEAVKVMDQFGWGAEFLRVNEDVLETYAACADGAEVVKAQAAFLARCEEEAISRRDAVSMEDMMPPSYSDEEEYG 277
            A G   R++ G    ++ +ER+E   E++   +S  ++LRMWDF+QCD K+CTGRKLCRL  V+ M+ G PF G+VLSP GE  +SPADRE+VETLG+SVIDCSWA++ E+P+ Q+R G+HRLLPF   AN VNYGKP KL+CAEAIAATLYIVG +DEAV++M++F WG EFL++N D LE YAAC + A+VV+AQ A+LA CEEE  +R     +  +      D EE G
Sbjct:   20 AGGRQPRKSRGRDAPVVSQEREEGESEISFKRRSFPITLRMWDFQQCDSKRCTGRKLCRLAYVKSMKPGQPFRGIVLSPAGEQALSPADREIVETLGISVIDCSWAKVQELPYKQLRSGYHRLLPF--HANTVNYGKPYKLSCAEAIAATLYIVGMKDEAVQIMEEFSWGMEFLKINMDCLEAYAACENSAQVVEAQNAYLAACEEEHKARSRRFDLPSLDSDGEDDYEEEG 249          
BLAST of mRNA_Ecto-sp9_F_contig1076.661.1 vs.
Match: 18S (rRNA aminocarboxypropyltransferase n=2 Tax=Peronospora effusa TaxID=542832 RepID=A0A3M6VVZ0_9STRA)

HSP 1 Score: 247 bits (631), Expect = 1.450e-75
Identity = 118/194 (60.82%), Postives = 151/194 (77.84%), Query Frame = 0
Query:   69 ERDESGELAQSITVSLRMWDFEQCDVKKCTGRKLCRLGLVREMELGAPFSGLVLSPNGELTVSPADREVVETLGMSVIDCSWARLDEIPFHQMRRGHHRLLPFLVAANPVNYGKPMKLTCAEAIAATLYIVGHQDEAVKVMDQFGWGAEFLRVNEDVLETYAACADGAEVVKAQAAFLARCEEEAISRRDAVSM 262
            E  E+    ++  V+LRMWDF+QCD K+CTGRKLCRLG ++ M+ GA F GLVLSP GE  VS AD ++V + G+SVIDCSWA++ E+P+ Q+R G HRLLPFLVAAN VNYG+P KL+CAEAIAATLYIVG QDEA++VMD+F WGAEFL++N D L+ YAAC + AEVV+AQ A+LA C+ E   R+  + +
Sbjct:   31 EESETNYRRRAFPVTLRMWDFQQCDAKRCTGRKLCRLGYIKSMKPGAHFRGLVLSPAGEQAVSRADLDLVTSSGISVIDCSWAKVQELPYKQLRSGVHRLLPFLVAANSVNYGRPHKLSCAEAIAATLYIVGLQDEAIQVMDEFSWGAEFLKINADCLQAYAACTNSAEVVEAQNAYLAACQTEQKERQQHMDL 224          
BLAST of mRNA_Ecto-sp9_F_contig1076.661.1 vs.
Match: 18S (rRNA aminocarboxypropyltransferase n=1 Tax=Globisporangium ultimum (strain ATCC 200006 / CBS 805.95 / DAOM BR144) TaxID=431595 RepID=K3WFG3_GLOUD)

HSP 1 Score: 248 bits (632), Expect = 1.820e-75
Identity = 124/206 (60.19%), Postives = 156/206 (75.73%), Query Frame = 0
Query:   69 ERDESGELAQSITVSLRMWDFEQCDVKKCTGRKLCRLGLVREMELGAPFSGLVLSPNGELTVSPADREVVETLGMSVIDCSWARLDEIPFHQMRRGHHRLLPFLVAANPVNYGKPMKLTCAEAIAATLYIVGHQDEAVKVMDQFGWGAEFLRVNEDVLETYAACADGAEVVKAQAAFLARCEEEAISRRDAVSMEDMMPPSYSDEE 274
            E  E+    +S  V+LRMWDF+QCD K+CTGRKLCR G V+ M+ GA F GLVLSP GE  VSPADRE+V ++G+SVIDCSWA++ E+P+ Q+R G HRLLPFLVAAN VNYG+P KL+CAEAIAATL+IVG QDEA +VM++F WG EF+++N D LE YAAC +  EV+ AQ A+LA CE+E   +RD     D +P   SD+E
Sbjct:   46 EESEANFKRRSFPVTLRMWDFQQCDSKRCTGRKLCRFGYVKSMKPGAHFRGLVLSPAGEQIVSPADREIVTSIGISVIDCSWAKVQELPYKQVRSGAHRLLPFLVAANSVNYGRPYKLSCAEAIAATLFIVGLQDEAFQVMEEFPWGMEFMKINMDCLEAYAACENSEEVIAAQNAYLAACEQE---QRDRAKRFD-LPSLESDDE 247          
BLAST of mRNA_Ecto-sp9_F_contig1076.661.1 vs.
Match: 18S (rRNA aminocarboxypropyltransferase n=2 Tax=Phytophthora TaxID=4783 RepID=A0A329RNH6_9STRA)

HSP 1 Score: 241 bits (615), Expect = 1.030e-74
Identity = 118/197 (59.90%), Postives = 152/197 (77.16%), Query Frame = 0
Query:   78 QSITVSLRMWDFEQCDVKKCTGRKLCRLGLVREMELGAPFSGLVLSPNGELTVSPADREVVETLGMSVIDCSWARLDEIPFHQMRRGHHRLLPFLVAANPVNYGKPMKLTCAEAIAATLYIVGHQDEAVKVMDQFGWGAEFLRVNEDVLETYAACADGAEVVKAQAAFLARCEEEAISRRDAVSMEDMMPPSYSDEE 274
            ++  V+LRMWDF+QCD K+CTGRKLCRLG ++ M+ GA F GLVLSP GE  VSP+DR +VE  G+SVIDCSWA++ E+P+ Q+R G HRLLPFLVAAN VNYG+P KL+C+EAIAATLYIVG ++EAV++MD+F WG EFL++N D LE YAAC +  +VV+AQ A+LA C+ E   R   ++    +P   SDEE
Sbjct:   35 RAFPVTLRMWDFQQCDSKRCTGRKLCRLGYIKSMKPGAHFRGLVLSPAGEHIVSPSDRSIVEGTGISVIDCSWAKVQELPYKQLRSGVHRLLPFLVAANSVNYGRPHKLSCSEAIAATLYIVGLKEEAVQLMDEFTWGPEFLKINADCLEAYAACENSEQVVEAQNAYLAACQTEHEQRLLRMN----LPTVESDEE 227          
BLAST of mRNA_Ecto-sp9_F_contig1076.661.1 vs.
Match: 18S (rRNA aminocarboxypropyltransferase n=2 Tax=Phytophthora TaxID=4783 RepID=A0A6A3KBB7_9STRA)

HSP 1 Score: 245 bits (625), Expect = 1.250e-74
Identity = 115/175 (65.71%), Postives = 143/175 (81.71%), Query Frame = 0
Query:   78 QSITVSLRMWDFEQCDVKKCTGRKLCRLGLVREMELGAPFSGLVLSPNGELTVSPADREVVETLGMSVIDCSWARLDEIPFHQMRRGHHRLLPFLVAANPVNYGKPMKLTCAEAIAATLYIVGHQDEAVKVMDQFGWGAEFLRVNEDVLETYAACADGAEVVKAQAAFLARCEEE 252
            ++  V+LRMWDF+QCD K+CTGRKLCRLG ++ M+ GA F GLVLSP GE  VSPADR +V+  G+S IDCSWA++ E+P+ Q+R G HRLLPFLVAAN VNYG+P KL+CAEAIAATLYIVG +DEAV++MD+F WGAEFL++N D LE YAAC + AEVV+AQ A+L  C+ E
Sbjct:   40 RAFPVTLRMWDFQQCDSKRCTGRKLCRLGYIQSMKPGAHFRGLVLSPAGEQVVSPADRGIVQGSGISAIDCSWAKVQELPYKQVRSGVHRLLPFLVAANSVNYGRPHKLSCAEAIAATLYIVGLKDEAVQLMDEFSWGAEFLKINADCLEAYAACENSAEVVEAQTAYLTACQTE 214          
BLAST of mRNA_Ecto-sp9_F_contig1076.661.1 vs.
Match: 18S (rRNA aminocarboxypropyltransferase n=11 Tax=Phytophthora TaxID=4783 RepID=D0P2X0_PHYIT)

HSP 1 Score: 243 bits (620), Expect = 1.370e-74
Identity = 113/181 (62.43%), Postives = 144/181 (79.56%), Query Frame = 0
Query:   82 VSLRMWDFEQCDVKKCTGRKLCRLGLVREMELGAPFSGLVLSPNGELTVSPADREVVETLGMSVIDCSWARLDEIPFHQMRRGHHRLLPFLVAANPVNYGKPMKLTCAEAIAATLYIVGHQDEAVKVMDQFGWGAEFLRVNEDVLETYAACADGAEVVKAQAAFLARCEEEAISRRDAVSM 262
            ++LRMWDF+QCD K+CTGRKLCRLG ++ M+ GA F GLVLSP GE  VSPADR +VE  G+SVIDCSWA++ E+P+ Q+R G HRLLPFLVAAN VNYG+P KL+CAEAIAATLYIVG + EA ++MD+F WGAEFL++N D LE Y+AC +  EVV+AQ A+L  C+ E + R   +++
Sbjct:    1 MTLRMWDFQQCDSKRCTGRKLCRLGYIKSMKPGAHFRGLVLSPAGEQIVSPADRTIVEGTGISVIDCSWAKVQELPYKQLRSGVHRLLPFLVAANSVNYGRPHKLSCAEAIAATLYIVGLKQEATQLMDEFSWGAEFLKINADCLEAYSACTNSTEVVEAQDAYLTACQTEHMERLQRINL 181          
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp9_F_contig1076.661.1 vs.
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Ectocarpus species9 EcSCA_722f female vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
18S5.690e-16197.17rRNA aminocarboxypropyltransferase n=2 Tax=Ectocar... [more]
18S3.600e-10166.37rRNA aminocarboxypropyltransferase n=1 Tax=Tribone... [more]
Uncharacterized1.460e-7862.19protein n=1 Tax=Pythium oligandrum TaxID=41045 Rep... [more]
18S1.550e-7762.76rRNA aminocarboxypropyltransferase n=1 Tax=Phytoph... [more]
18S2.910e-7755.60rRNA aminocarboxypropyltransferase n=1 Tax=Pythium... [more]
18S1.450e-7560.82rRNA aminocarboxypropyltransferase n=2 Tax=Peronos... [more]
18S1.820e-7560.19rRNA aminocarboxypropyltransferase n=1 Tax=Globisp... [more]
18S1.030e-7459.90rRNA aminocarboxypropyltransferase n=2 Tax=Phytoph... [more]
18S1.250e-7465.71rRNA aminocarboxypropyltransferase n=2 Tax=Phytoph... [more]
18S1.370e-7462.43rRNA aminocarboxypropyltransferase n=11 Tax=Phytop... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0 of Ectocarpus species9 EcSCA_722f female
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR007177Ribosome biogenesis protein, C-terminalPFAMPF04034Ribo_biogen_Ccoord: 120..246
e-value: 7.6E-52
score: 174.4
IPR007209RNase L inhibitor RLI, possible metal-binding domainPFAMPF04068RLIcoord: 86..113
e-value: 2.6E-10
score: 39.9
IPR022968Ribosome biogenesis proteinPANTHERPTHR20426FAMILY NOT NAMEDcoord: 45..329
IPR022968Ribosome biogenesis proteinHAMAPMF_01116TSR3coord: 82..247
score: 39.416
NoneNo IPR availablePRODOMPD016638coord: 102..246
e-value: 3.0E-45
score: 460.0

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp9_F_contig1076contigEcto-sp9_F_contig1076:10819..16182 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Ectocarpus species9 EcSCA_722f female2022-09-29
Diamond blastp: OGS1.0 of Ectocarpus species9 EcSCA_722f female vs UniRef902022-09-16
OGS1.0 of Ectocarpus species9 EcSCA_722f female2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp9_F_contig1076.661.1mRNA_Ecto-sp9_F_contig1076.661.1Ectocarpus species9 EcSCA_722f femalemRNAEcto-sp9_F_contig1076 10790..16732 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp9_F_contig1076.661.1 ID=prot_Ecto-sp9_F_contig1076.661.1|Name=mRNA_Ecto-sp9_F_contig1076.661.1|organism=Ectocarpus species9 EcSCA_722f female|type=polypeptide|length=358bp
MERDRPLKGKGGGKRGKGRGGGGGGGGGGRGRGGRPKSSQGRGHGHRHHA
QGDSGRRNGGAAREMIDRERDESGELAQSITVSLRMWDFEQCDVKKCTGR
KLCRLGLVREMELGAPFSGLVLSPNGELTVSPADREVVETLGMSVIDCSW
ARLDEIPFHQMRRGHHRLLPFLVAANPVNYGKPMKLTCAEAIAATLYIVG
HQDEAVKVMDQFGWGAEFLRVNEDVLETYAACADGAEVVKAQAAFLARCE
EEAISRRDAVSMEDMMPPSYSDEEEYGNDGSENGSENGSSEGVTEREIAE
ERAEEKESWTGGGDGGKKNGEQCPADEEENVSVAASDSRGAAVAAVDGGD
AVEQVPR*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR007177TDD_dom
IPR007209RNaseL-inhib_metal-bd_dom
IPR022968Rbsm_biogenesis