prot_Ecto-sp9_F_contig1075.653.1 (polypeptide) Ectocarpus species9 EcSCA_722f female

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp9_F_contig1075.653.1
Unique Nameprot_Ecto-sp9_F_contig1075.653.1
Typepolypeptide
OrganismEctocarpus species9 EcSCA_722f female (Ectocarpus species9 EcSCA_722f female)
Sequence length257
Homology
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BLAST of mRNA_Ecto-sp9_F_contig1075.653.1 vs.
Match: Uncharacterized (protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LD48_ECTSI)

HSP 1 Score: 327 bits (837), Expect = 3.160e-110
Identity = 224/256 (87.50%), Postives = 229/256 (89.45%), Query Frame = 0 
Query:    1 MAVFPRVQQQERHGSRGXXXXXXXXXXXXXXXXXXXXXXXXXTAKKRASSSVRSSPRLHLTQKRTPANARRGSGPVGNRFASDQRQASPISTKAKGRTSSVGAHRDSSGGRTAPSKAAKXXXXXXXXXXXXXSSPADGVAKVMVDLKGDSTAVIDKAMGKVEAECGTFVTTVLESCSAGVSGREKHVETAAAALREIETRQASMASRRSEMLKEVESNSSHLSAVVERCRAALDSLQQAESRKLKSGLDRATGTKS 256
            MAVFPRVQQQ RHGSRG     XXXXXXXXXXXXXXXX    TAKKRASSSVRSSPRLHLTQKRTPANARRGSGPVGNRFAS+QRQ    STKAKGRTSSVGAHRDSSGG         XXXXXXXXXXXXX SPAD VAKVM+DLKGDSTAVIDKAMGKVEAECGTFV TVLESCSAGVSGRE+H ETAAAALREIETRQAS+ASRRSEMLKEVESNSS+LSAVVERCRAALDSLQQAESRKLKSGLDRATGTKS
Sbjct:    1 MAVFPRVQQQGRHGSRGGGRGTXXXXXXXXXXXXXXXXRRTVTAKKRASSSVRSSPRLHLTQKRTPANARRGSGPVGNRFASNQRQ----STKAKGRTSSVGAHRDSSGGXXXXXXXXXXXXXXXXXXXXXXXSPADDVAKVMIDLKGDSTAVIDKAMGKVEAECGTFVMTVLESCSAGVSGREEHDETAAAALREIETRQASLASRRSEMLKEVESNSSNLSAVVERCRAALDSLQQAESRKLKSGLDRATGTKS 252
[Close]
BLAST of mRNA_Ecto-sp9_F_contig1075.653.1 vs.
Match: Uncharacterized (protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5LLS0_9PHAE)

HSP 1 Score: 235 bits (599), Expect = 3.800e-75
Identity = 148/165 (89.70%), Postives = 155/165 (93.94%), Query Frame = 0 
Query:   92 TKAKGRTSSVGAHRDSSGGRTAPSKAAKXXXXXXXXXXXXXSSPADGVAKVMVDLKGDSTAVIDKAMGKVEAECGTFVTTVLESCSAGVSGREKHVETAAAALREIETRQASMASRRSEMLKEVESNSSHLSAVVERCRAALDSLQQAESRKLKSGLDRATGTKS 256
            TKAKGRTSSVGAHRDSSGGRT       XXXXXXXXXXXXXSSPADGVAK+M+DLKGD TAVIDKAMGKVEAECGTFVTTVLESCSAGVSGRE+H ETAAAALRE++TRQASMASRRSEMLKEV SNSS+LSAVVERCRAALD+LQQAESRKLKSGLDRATGTKS
Sbjct:   15 TKAKGRTSSVGAHRDSSGGRTXXXXXXXXXXXXXXXXXXXXSSPADGVAKLMIDLKGDITAVIDKAMGKVEAECGTFVTTVLESCSAGVSGREEHYETAAAALREMKTRQASMASRRSEMLKEVASNSSNLSAVVERCRAALDNLQQAESRKLKSGLDRATGTKS 179
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp9_F_contig1075.653.1 vs.
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Ectocarpus species9 EcSCA_722f female vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
Uncharacterized3.160e-11087.50protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 ... [more]
Uncharacterized3.800e-7589.70protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp9_F_contig1075contigEcto-sp9_F_contig1075:10881..14736 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Ectocarpus species9 EcSCA_722f female2022-09-29
Diamond blastp: OGS1.0 of Ectocarpus species9 EcSCA_722f female vs UniRef902022-09-16
OGS1.0 of Ectocarpus species9 EcSCA_722f female2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp9_F_contig1075.653.1mRNA_Ecto-sp9_F_contig1075.653.1Ectocarpus species9 EcSCA_722f femalemRNAEcto-sp9_F_contig1075 10187..16769 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp9_F_contig1075.653.1 ID=prot_Ecto-sp9_F_contig1075.653.1|Name=mRNA_Ecto-sp9_F_contig1075.653.1|organism=Ectocarpus species9 EcSCA_722f female|type=polypeptide|length=257bp
MAVFPRVQQQERHGSRGGGRGTASSSSSSVTATKTTTPRRTVTAKKRASS
SVRSSPRLHLTQKRTPANARRGSGPVGNRFASDQRQASPISTKAKGRTSS
VGAHRDSSGGRTAPSKAAKAASAAAGGGARKKSSPADGVAKVMVDLKGDS
TAVIDKAMGKVEAECGTFVTTVLESCSAGVSGREKHVETAAAALREIETR
QASMASRRSEMLKEVESNSSHLSAVVERCRAALDSLQQAESRKLKSGLDR
ATGTKS*
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