prot_Ecto-sp9_F_contig107.622.1 (polypeptide) Ectocarpus species9 EcSCA_722f female

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp9_F_contig107.622.1
Unique Nameprot_Ecto-sp9_F_contig107.622.1
Typepolypeptide
OrganismEctocarpus species9 EcSCA_722f female (Ectocarpus species9 EcSCA_722f female)
Sequence length178
Homology
BLAST of mRNA_Ecto-sp9_F_contig107.622.1 vs.
Match: Uncharacterized (protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FX58_ECTSI)

HSP 1 Score: 353 bits (906), Expect = 3.090e-123
Identity = 177/177 (100.00%), Postives = 177/177 (100.00%), Query Frame = 0
Query:    1 MFYLKELRRPMLVPPSDFGPKLKDTIRRKLIEEVEGTSVGSLGFVITVTNVSDDQIQMGTIEFDTGFANVLVVYRAICFRPFVNEVLDAAVSHVTELGFFAEVGPLEVFVSRLGMPDDIAGGYDPVGDMWVSSEDSDTEIKSGCGVRLRIIGVTVGAELKAVGSIKDDFLGLVSGPV 177
            MFYLKELRRPMLVPPSDFGPKLKDTIRRKLIEEVEGTSVGSLGFVITVTNVSDDQIQMGTIEFDTGFANVLVVYRAICFRPFVNEVLDAAVSHVTELGFFAEVGPLEVFVSRLGMPDDIAGGYDPVGDMWVSSEDSDTEIKSGCGVRLRIIGVTVGAELKAVGSIKDDFLGLVSGPV
Sbjct:    1 MFYLKELRRPMLVPPSDFGPKLKDTIRRKLIEEVEGTSVGSLGFVITVTNVSDDQIQMGTIEFDTGFANVLVVYRAICFRPFVNEVLDAAVSHVTELGFFAEVGPLEVFVSRLGMPDDIAGGYDPVGDMWVSSEDSDTEIKSGCGVRLRIIGVTVGAELKAVGSIKDDFLGLVSGPV 177          
BLAST of mRNA_Ecto-sp9_F_contig107.622.1 vs.
Match: S1 (motif domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YX29_9STRA)

HSP 1 Score: 231 bits (589), Expect = 6.800e-75
Identity = 117/177 (66.10%), Postives = 143/177 (80.79%), Query Frame = 0
Query:    1 MFYLKELRRPMLVPPSDFGPKLKDTIRRKLIEEVEGTSVGSLGFVITV--TNVSDDQIQMGTIEFDTGFANVLVVYRAICFRPFVNEVLDAAVSHVTELGFFAEVGPLEVFVSRLGMPDDIAG-GYDPVGDMWVSSEDSDTEIKSGCGVRLRIIGVTVGAELKAVGSIKDDFLGLVS 174
            MFYLK L++ +L+ P  FGP L + + R L+E+VEG S+G+ GFVI+V   N ++  ++MGTIE+DTG AN++  Y AICFRPF NEVLDA VS+VT+LGFFAEVGPLE+FVSR  MP+DIA  GYD VGDMWVS ED + EIK GCGVRLRIIG+TV AELKAVGS+KDD+LGLVS
Sbjct:    1 MFYLKTLKKDLLLEPQFFGPNLHEVVGRLLLEQVEGMSLGNDGFVISVFSQNSANTSMEMGTIEYDTGAANIICTYEAICFRPFRNEVLDATVSNVTDLGFFAEVGPLEIFVSRFNMPEDIANTGYDSVGDMWVS-EDKEVEIKKGCGVRLRIIGITVEAELKAVGSMKDDYLGLVS 176          
BLAST of mRNA_Ecto-sp9_F_contig107.622.1 vs.
Match: Hypothetical (protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A6S9LV75_HETAK)

HSP 1 Score: 215 bits (548), Expect = 1.210e-68
Identity = 105/175 (60.00%), Postives = 137/175 (78.29%), Query Frame = 0
Query:    1 MFYLKELRRPMLVPPSDFGPKLKDTIRRKLIEEVEGTSVGSLGFVITVTNVSDDQIQMGTIEFDTGFANVLVVYRAICFRPFVNEVLDAAVSHVTELGFFAEVGPLEVFVSRLGMPDDIAGGYDPVGDMWVSSEDSDTEIKSGCGVRLRIIGVTV-GAELKAVGSIKDDFLGLVS 174
            MF+LK+L R + +PP+  GPKLK+TIRR+LIEEVEG +VG LG+VITVT + D+ I  G IE+D+GF    VVY AICFRPF +EVLDA +S VTELGFFA+VGPL VFVSR  MP D+  GYDP  ++W  SED + E+++G GVRLRI+G++V  A++ A+G++ DD+LGLVS
Sbjct:    1 MFFLKQLTRELQLPPAFLGPKLKETIRRRLIEEVEGQAVGKLGYVITVTEMKDEAISQGLIEYDSGFVTFNVVYSAICFRPFRDEVLDATISSVTELGFFADVGPLTVFVSRHAMPADLQEGYDPARELW-QSEDREVELRAGAGVRLRIMGLSVDAADISAIGTVADDYLGLVS 174          
BLAST of mRNA_Ecto-sp9_F_contig107.622.1 vs.
Match: Hypothetical (protein n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2Y2T3_9STRA)

HSP 1 Score: 204 bits (519), Expect = 3.100e-64
Identity = 101/175 (57.71%), Postives = 134/175 (76.57%), Query Frame = 0
Query:    1 MFYLKELRRPMLVPPSDFGPKLKDTIRRKLIEEVEGTSVGSLGFVITVTNVSDDQIQMGTIEFDTGFANVLVVYRAICFRPFVNEVLDAAVSHVTELGFFAEVGPLEVFVSRLGMPDDIAGGYDPVGDMWVSSEDSDTEIKSGCGVRLRIIGVTV-GAELKAVGSIKDDFLGLVS 174
            MF+LKEL R +L+PP+  GPK+K+TIRR+LIEEVEGT +G  G+VITVT V ++ ++ G I  + G     + Y AICFRPF  EVLDA V+ VTELGFFAEVGPL+VFVSR  MP D+  G+D   ++WVS ED + E++ GCGVRLRI+G++V  A++ A+G+IKDD+LGL+S
Sbjct:    1 MFFLKELTRELLLPPAYLGPKIKETIRRRLIEEVEGTCLGKYGYVITVTEVKEEGMKTGVISNEFGEVIFHISYDAICFRPFKGEVLDANVTVVTELGFFAEVGPLQVFVSRHAMPQDLQEGFDAANEVWVS-EDKEVELRQGCGVRLRIMGLSVDAADISAIGTIKDDYLGLIS 174          
BLAST of mRNA_Ecto-sp9_F_contig107.622.1 vs.
Match: Uncharacterized (protein n=27 Tax=Oomycota TaxID=4762 RepID=K3XAJ8_GLOUD)

HSP 1 Score: 199 bits (506), Expect = 2.650e-62
Identity = 100/175 (57.14%), Postives = 131/175 (74.86%), Query Frame = 0
Query:    1 MFYLKELRRPMLVPPSDFGPKLKDTIRRKLIEEVEGTSVGSLGFVITVTNVSDDQIQMGTIEFDTGFANVLVVYRAICFRPFVNEVLDAAVSHVTELGFFAEVGPLEVFVSRLGMPDDIAGGYDPVGDMWVSSEDSDTEIKSGCGVRLRIIGVTVGA-ELKAVGSIKDDFLGLVS 174
            MF+LK+L R +L+ P  FGPKL D IR +LIEEVEGTS+G  G+VITVT V D+ I  G I+ ++GF    + YRAI FRPF N+VLDA V+ V +LGFFA+VGPL+VFVSR  MP D+  GYD   + W+S +D + EI+ GCGVRL+I+GV+V   E+ A+G+IKDD+LGL+S
Sbjct:    1 MFFLKQLSRDLLLHPMHFGPKLHDIIRLRLIEEVEGTSMGKYGYVITVTEVRDEDIGKGVIQDNSGFVCFNIRYRAILFRPFKNQVLDAVVTVVNQLGFFADVGPLQVFVSRHAMPTDLNNGYDHENNAWIS-DDREVEIRKGCGVRLKIMGVSVDVTEINAIGTIKDDYLGLIS 174          
BLAST of mRNA_Ecto-sp9_F_contig107.622.1 vs.
Match: Hypothetical (protein n=2 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2HLJ0_9STRA)

HSP 1 Score: 191 bits (485), Expect = 3.980e-59
Identity = 93/178 (52.25%), Postives = 131/178 (73.60%), Query Frame = 0
Query:    1 MFYLKELRRPMLVPPSDFGPKLKDTIRRKLIEEVEGTSVGSLGFVITVTNVSDD-QIQMGTIEFDTGFANVLVVYRAICFRPFVNEVLDAAVSHVTELGFFAEVGPLEVFVSRLGMPDDIAGGYDPVGDMWVSSEDSDTEIKSGCGVRLRIIGVTVGA-ELKAVGSIKDDFLGLVSGP 176
            MF+ K+LR  +L+ P   GPKLK TIRR+LI+E+EG+ +  +G+V+ VT+++D   I+ G IE++TG  + +V Y A+ FRPF NEVLDA V+ V +LGFF + GPL+VFVSR  +P DI  G+DP  DMWVS ED + EIK GC VRLRI+G+ + A ++ AVG+++DDFLG++  P
Sbjct:    1 MFFYKKLRHEVLISPEYLGPKLKQTIRRRLIDEIEGSCINKIGYVVCVTDINDTTDIEAGLIEYETGHTSFMVTYGAVLFRPFKNEVLDATVTTVNQLGFFCKAGPLQVFVSRYNLPGDIREGFDPNQDMWVS-EDGEVEIKRGCVVRLRIMGLAMEASKINAVGNMRDDFLGVIELP 177          
BLAST of mRNA_Ecto-sp9_F_contig107.622.1 vs.
Match: Uncharacterized (protein n=8 Tax=Saprolegniaceae TaxID=4764 RepID=A0A024TU38_9STRA)

HSP 1 Score: 191 bits (484), Expect = 5.640e-59
Identity = 96/175 (54.86%), Postives = 129/175 (73.71%), Query Frame = 0
Query:    1 MFYLKELRRPMLVPPSDFGPKLKDTIRRKLIEEVEGTSVGSLGFVITVTNVSDDQIQMGTIEFDTGFANVLVVYRAICFRPFVNEVLDAAVSHVTELGFFAEVGPLEVFVSRLGMPDDIAGGYDPVGDMWVSSEDSDTEIKSGCGVRLRIIGVTVGA-ELKAVGSIKDDFLGLVS 174
            MF+LK+L+R +L+ P  FGPKL D IR +LIEEVEGTS+G  G+VI VT V D+ I  G I+ ++GF    + YRAI FRPF NEVLDA V+ V +LGFFAEVGPL+VFVSR  M  D+  GYD     W+S +D + EI+ G GVRL+I+GV++   E++A+G+IKD++LG++S
Sbjct:    1 MFFLKQLKRELLLHPMHFGPKLHDIIRLRLIEEVEGTSLGKFGYVIAVTEVRDEDIGQGVIQDNSGFVCFNIAYRAILFRPFKNEVLDAVVTVVNQLGFFAEVGPLQVFVSRHAMSTDLNEGYDHEQSAWIS-QDREVEIRKGVGVRLKIMGVSIDVTEIQAIGTIKDNYLGVIS 174          
BLAST of mRNA_Ecto-sp9_F_contig107.622.1 vs.
Match: ING (domain-containing protein n=1 Tax=Albugo candida TaxID=65357 RepID=A0A024GUM2_9STRA)

HSP 1 Score: 197 bits (500), Expect = 3.770e-58
Identity = 98/175 (56.00%), Postives = 129/175 (73.71%), Query Frame = 0
Query:    1 MFYLKELRRPMLVPPSDFGPKLKDTIRRKLIEEVEGTSVGSLGFVITVTNVSDDQIQMGTIEFDTGFANVLVVYRAICFRPFVNEVLDAAVSHVTELGFFAEVGPLEVFVSRLGMPDDIAGGYDPVGDMWVSSEDSDTEIKSGCGVRLRIIGVTVGA-ELKAVGSIKDDFLGLVS 174
            MF+LK+L R +L+ P  FGPKL D IR +LIEEVEGTS+G  G+VITVT V D+ I  G I+  +G+    + YRAI FRPF N+VLDA VS V +LGFFA+VGPL+VFVSR  MP D+  GYD   + W+S +D + EI+  CG+RLRI+GV++   E+ A+G+IKDD+LGL+S
Sbjct:  265 MFFLKQLSRDLLLHPMHFGPKLHDIIRLRLIEEVEGTSMGKYGYVITVTEVRDEDIGKGVIQDSSGYVCFNIRYRAILFRPFKNQVLDAVVSVVNQLGFFADVGPLQVFVSRHAMPTDLNNGYDHENNAWIS-DDREVEIRKSCGIRLRIMGVSIDVTEINAIGTIKDDYLGLIS 438          
BLAST of mRNA_Ecto-sp9_F_contig107.622.1 vs.
Match: Uncharacterized (protein n=1 Tax=Aphanomyces astaci TaxID=112090 RepID=A0A425DP05_9STRA)

HSP 1 Score: 184 bits (467), Expect = 1.120e-55
Identity = 93/171 (54.39%), Postives = 125/171 (73.10%), Query Frame = 0
Query:    1 MFYLKELRRPMLVPPSDFGPKLKDTIRRKLIEEVEGTSVGSLGFVITVTNVSDDQIQMGTIEFDTGFANVLVVYRAICFRPFVNEVLDAAVSHVTELGFFAEVGPLEVFVSRLGMPDDIAGGYDPVGDMWVSSEDSDTEIKSGCGVRLRIIGVTVGA-ELKAVGSIKDDFL 170
            MF+LK+L+R +L+ P  FGPKL D IR +LIEEVEGTS+G  G+VI VT V D+ I  G I+ ++G+    + YRAI FRPF NEVLDA V+ V +LGFFAEVGPL+VFVSR  M  D+  GYD     W+S +D + EI+ G GVRL+I+GV++   E++A+G+IKD++L
Sbjct:    1 MFFLKQLKRELLLHPMHFGPKLHDIIRLRLIEEVEGTSLGKFGYVIAVTEVRDEDIGQGVIQDNSGYVCFNIAYRAILFRPFKNEVLDAVVTVVNQLGFFAEVGPLQVFVSRHAMSTDLNEGYDHEQSAWIS-QDREVEIRKGVGVRLKIMGVSIDVTEIQAIGTIKDNYL 170          
BLAST of mRNA_Ecto-sp9_F_contig107.622.1 vs.
Match: Uncharacterized (protein n=1 Tax=Phytophthora megakarya TaxID=4795 RepID=A0A225WVR4_9STRA)

HSP 1 Score: 177 bits (450), Expect = 6.760e-54
Identity = 89/155 (57.42%), Postives = 115/155 (74.19%), Query Frame = 0
Query:    1 MFYLKELRRPMLVPPSDFGPKLKDTIRRKLIEEVEGTSVGSLGFVITVTNVSDDQIQMGTIEFDTGFANVLVVYRAICFRPFVNEVLDAAVSHVTELGFFAEVGPLEVFVSRLGMPDDIAGGYDPVGDMWVSSEDSDTEIKSGCGVRLRIIGVTV 155
            MF+LK+L R +L+ P  FGPKL D IR +LIEEVEGTS+G  G+VITVT V D+ I  G I+ ++GF    + YRAI FRPF N+VLDA V+ V +LGFFA+VGPL+VFVSR  MP D+  GYD   + W+S +D + EI+ GCGVRL+I+GV+V
Sbjct:    1 MFFLKQLSRDLLLHPMHFGPKLHDIIRLRLIEEVEGTSMGKYGYVITVTEVRDEDIGKGVIQDNSGFVCFNIRYRAILFRPFKNQVLDAVVTVVNQLGFFADVGPLQVFVSRHAMPTDLNNGYDHESNAWIS-DDREVEIRKGCGVRLKIMGVSV 154          
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp9_F_contig107.622.1 vs.
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Ectocarpus species9 EcSCA_722f female vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
Uncharacterized3.090e-123100.00protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 ... [more]
S16.800e-7566.10motif domain-containing protein n=1 Tax=Tribonema ... [more]
Hypothetical1.210e-6860.00protein n=1 Tax=Heterosigma akashiwo TaxID=2829 Re... [more]
Hypothetical3.100e-6457.71protein n=1 Tax=Fibrocapsa japonica TaxID=94617 Re... [more]
Uncharacterized2.650e-6257.14protein n=27 Tax=Oomycota TaxID=4762 RepID=K3XAJ8_... [more]
Hypothetical3.980e-5952.25protein n=2 Tax=Dictyocha speculum TaxID=35687 Rep... [more]
Uncharacterized5.640e-5954.86protein n=8 Tax=Saprolegniaceae TaxID=4764 RepID=A... [more]
ING3.770e-5856.00domain-containing protein n=1 Tax=Albugo candida T... [more]
Uncharacterized1.120e-5554.39protein n=1 Tax=Aphanomyces astaci TaxID=112090 Re... [more]
Uncharacterized6.760e-5457.42protein n=1 Tax=Phytophthora megakarya TaxID=4795 ... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0 of Ectocarpus species9 EcSCA_722f female
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR005576RNA polymerase Rpb7-like , N-terminalPFAMPF03876SHS2_Rpb7-Ncoord: 13..79
e-value: 6.5E-12
score: 45.6
IPR003029S1 domainPFAMPF00575S1coord: 80..156
e-value: 7.0E-9
score: 35.9
NoneNo IPR availableGENE3D2.40.50.140coord: 84..173
e-value: 1.0E-24
score: 88.2
NoneNo IPR availablePANTHERPTHR12709:SF4DNA-DIRECTED RNA POLYMERASE II SUBUNIT RPB7coord: 1..171
NoneNo IPR availablePANTHERPTHR12709DNA-DIRECTED RNA POLYMERASE II, IIIcoord: 1..171
IPR036898RNA polymerase Rpb7-like, N-terminal domain superfamilyGENE3D3.30.1490.120coord: 1..83
e-value: 3.0E-23
score: 83.9
IPR036898RNA polymerase Rpb7-like, N-terminal domain superfamilySUPERFAMILY88798N-terminal, heterodimerisation domain of RBP7 (RpoE)coord: 1..80
IPR012340Nucleic acid-binding, OB-foldSUPERFAMILY50249Nucleic acid-binding proteinscoord: 81..172

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp9_F_contig107contigEcto-sp9_F_contig107:42842..47086 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Ectocarpus species9 EcSCA_722f female2022-09-29
Diamond blastp: OGS1.0 of Ectocarpus species9 EcSCA_722f female vs UniRef902022-09-16
OGS1.0 of Ectocarpus species9 EcSCA_722f female2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp9_F_contig107.622.1mRNA_Ecto-sp9_F_contig107.622.1Ectocarpus species9 EcSCA_722f femalemRNAEcto-sp9_F_contig107 42548..47690 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp9_F_contig107.622.1 ID=prot_Ecto-sp9_F_contig107.622.1|Name=mRNA_Ecto-sp9_F_contig107.622.1|organism=Ectocarpus species9 EcSCA_722f female|type=polypeptide|length=178bp
MFYLKELRRPMLVPPSDFGPKLKDTIRRKLIEEVEGTSVGSLGFVITVTN
VSDDQIQMGTIEFDTGFANVLVVYRAICFRPFVNEVLDAAVSHVTELGFF
AEVGPLEVFVSRLGMPDDIAGGYDPVGDMWVSSEDSDTEIKSGCGVRLRI
IGVTVGAELKAVGSIKDDFLGLVSGPV*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR005576Rpb7-like_N
IPR003029S1_domain
IPR036898RNA_pol_Rpb7-like_N_sf
IPR012340NA-bd_OB-fold