mRNA_Ecto-sp9_F_contig107.619.1 (mRNA) Ectocarpus species9 EcSCA_722f female

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_Ecto-sp9_F_contig107.619.1
Unique NamemRNA_Ecto-sp9_F_contig107.619.1
TypemRNA
OrganismEctocarpus species9 EcSCA_722f female (Ectocarpus species9 EcSCA_722f female)
Homology
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BLAST of mRNA_Ecto-sp9_F_contig107.619.1 vs.
Match: Elongation (factor P n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FX61_ECTSI)

HSP 1 Score: 489 bits (1258), Expect = 1.250e-169
Identity = 249/258 (96.51%), Postives = 254/258 (98.45%), Query Frame = 1 
Query:    1 MDDSIIGPNRWIDRSERSGLGLLGVEAFVLPSATLRQGSFAQQQQQQRGVTRWTAAAGPRTARGGGVGALSMGSTADFKNGMTIDIDGNPCKILEFLHVKPGKGSAFVRTKVKNLITGNSLEKTFRAGEPVEQAQVDKLDLQYTYKEGDMYYFMDSATYEEISIAEKVVGDKAGFFLEGMELSATYFKGKVIEVTLPKQMILEVVETDPGEKGNTAQGATKPAKVAAGAMINVPLFITTGEKIRVDTDSKKYMERAKE 774
            MD+S  GPNRW+DRSERSGLGLLG EAFVLPSATLRQGSFAQQQQQQRGVTRWTAAAGPRTARGGGVGALSMGSTADFKNGMTIDIDGNPCKILEFLHVKPGKGSAFVRTKVKNLITGNSLEKTFRAGEPVEQAQVDK+DLQYTYKEGDMYYFMDSATYEE+SIAEKVVGDKAGFFLEGMELSATYFKGKVIEVTLPKQMILEVVETDPGEKGNTAQGATKPAKVAAGA+INVPLFITTGEKIRVD DSKKYMERAKE
Sbjct:    1 MDEST-GPNRWMDRSERSGLGLLGAEAFVLPSATLRQGSFAQQQQQQRGVTRWTAAAGPRTARGGGVGALSMGSTADFKNGMTIDIDGNPCKILEFLHVKPGKGSAFVRTKVKNLITGNSLEKTFRAGEPVEQAQVDKVDLQYTYKEGDMYYFMDSATYEEVSIAEKVVGDKAGFFLEGMELSATYFKGKVIEVTLPKQMILEVVETDPGEKGNTAQGATKPAKVAAGAIINVPLFITTGEKIRVDIDSKKYMERAKE 257
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BLAST of mRNA_Ecto-sp9_F_contig107.619.1 vs.
Match: Uncharacterized (protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KN57_9PHAE)

HSP 1 Score: 370 bits (949), Expect = 6.580e-124
Identity = 185/187 (98.93%), Postives = 187/187 (100.00%), Query Frame = 1 
Query:  214 MGSTADFKNGMTIDIDGNPCKILEFLHVKPGKGSAFVRTKVKNLITGNSLEKTFRAGEPVEQAQVDKLDLQYTYKEGDMYYFMDSATYEEISIAEKVVGDKAGFFLEGMELSATYFKGKVIEVTLPKQMILEVVETDPGEKGNTAQGATKPAKVAAGAMINVPLFITTGEKIRVDTDSKKYMERAKE 774
            MGSTADFKNGMTIDIDGNPCKILEFLHVKPGKGSAFVRTKVKNLITGNSLEKTFRAGEPVEQAQVDKLDLQYTYKEGDMYYFMDSATYEE+SIAEKVVGDKAGFFLEGMELSATYFKGKVIEVTLPKQMILEVVETDPGEKGNTAQGATKPAKVA+GAMINVPLFITTGEKIRVDTDSKKYMERAKE
Sbjct:    1 MGSTADFKNGMTIDIDGNPCKILEFLHVKPGKGSAFVRTKVKNLITGNSLEKTFRAGEPVEQAQVDKLDLQYTYKEGDMYYFMDSATYEEVSIAEKVVGDKAGFFLEGMELSATYFKGKVIEVTLPKQMILEVVETDPGEKGNTAQGATKPAKVASGAMINVPLFITTGEKIRVDTDSKKYMERAKE 187
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BLAST of mRNA_Ecto-sp9_F_contig107.619.1 vs.
Match: Elongation (factor P (EF-P) KOW-like domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CK22_9STRA)

HSP 1 Score: 238 bits (606), Expect = 2.330e-72
Identity = 107/187 (57.22%), Postives = 151/187 (80.75%), Query Frame = 1 
Query:  214 MGSTADFKNGMTIDIDGNPCKILEFLHVKPGKGSAFVRTKVKNLITGNSLEKTFRAGEPVEQAQVDKLDLQYTYKEGDMYYFMDSATYEEISIAEKVVGDKAGFFLEGMELSATYFKGKVIEVTLPKQMILEVVETDPGEKGNTAQGATKPAKVAAGAMINVPLFITTGEKIRVDTDSKKYMERAKE 774
            M ST+DFK G+TI++DG P ++ EFLHVKPGKG+AFVR+K+KNLITGN++EKTFRAGEP+  AQV++L LQ+TY +G  + FMD+ ++EE+ +A+ ++GDKA +  EGM+L A  +  ++I+V++P+ M+L V +TDPG KGNTAQG +KPA +  G ++ VPLFI  GEKI+VDT+ +KYMER+KE
Sbjct:    1 MASTSDFKTGLTIEVDGAPVRVQEFLHVKPGKGAAFVRSKLKNLITGNTVEKTFRAGEPITLAQVERLTLQFTYDDGTNFCFMDTTSFEEVQMAKSILGDKADWLQEGMQLEALQWTDRIIDVSIPRTMVLTVTQTDPGVKGNTAQGGSKPATLETGVVLQVPLFINEGEKIKVDTEERKYMERSKE 187
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BLAST of mRNA_Ecto-sp9_F_contig107.619.1 vs.
Match: Elongation (factor P n=3 Tax=Cyanobacteria TaxID=1117 RepID=K9YEZ9_HALP7)

HSP 1 Score: 220 bits (560), Expect = 1.540e-65
Identity = 102/184 (55.43%), Postives = 144/184 (78.26%), Query Frame = 1 
Query:  214 MGSTADFKNGMTIDIDGNPCKILEFLHVKPGKGSAFVRTKVKNLITGNSLEKTFRAGEPVEQAQVDKLDLQYTYKEGDMYYFMDSATYEEISIAEKVVGDKAGFFLEGMELSATYFKGKVIEVTLPKQMILEVVETDPGEKGNTAQGATKPAKVAAGAMINVPLFITTGEKIRVDTDSKKYMER 765
            M S+ DF+ GMTI+++GN  +++EFLHVKPGKGSAFVRTK+KN+ +GN +E+TFRAGE V QA ++K ++Q+TYKEGD Y FMD  ++EE+ I  + +GD+A +  EGME+SA Y++G ++EV +P  ++LEVVETDPG KG+TA G +KPA V  GA + VPLFI+ GE+I++DT +  Y+ R
Sbjct:    1 MISSNDFRTGMTIELEGNVWRVVEFLHVKPGKGSAFVRTKLKNVQSGNVVERTFRAGETVPQATLEKREMQHTYKEGDEYVFMDMESFEEVRIPPETIGDRAKYINEGMEISAVYWEGNILEVEVPNSVVLEVVETDPGVKGDTATGGSKPATVETGAQVMVPLFISVGERIKIDTRNDTYVGR 184
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BLAST of mRNA_Ecto-sp9_F_contig107.619.1 vs.
Match: Hypothetical (protein n=1 Tax=Pinguiococcus pyrenoidosus TaxID=172671 RepID=A0A7R9UCL6_9STRA)

HSP 1 Score: 220 bits (560), Expect = 5.860e-65
Identity = 106/190 (55.79%), Postives = 143/190 (75.26%), Query Frame = 1 
Query:  211 SMGSTADFKNGMTIDIDGNPCKILEFLHVKPGKGSAFVRTKVKNLITGNSLEKTFRAGEPVEQAQVDKLDLQYTYKE--GDMYYFMDSATYEEISIAEKVVGDKAGFFLEGMELSATYFKGKVIEVTLPKQMILEVVETDPGEKGNTAQGATKPAKVAAGAMINVPLFITTGEKIRVDTDSKKYMERAKE 774
            SM ST+DFKNG+T+++DG P KI+EF+HVKPGKG+AFVR+K+KNL+ G+ +EKT+RAGE VE AQV+K D+Q+TY +     Y FMD A++EE++    V+G KA F  +GME++   +  K+I+V LP+ M+ EVVETDPG KGNT QG TKPA +  GA++ VPLF+  GE I+VDT   KY+ RA E
Sbjct:   38 SMASTSDFKNGLTLEVDGTPVKIVEFMHVKPGKGAAFVRSKLKNLMNGSVVEKTWRAGEKVELAQVEKFDMQFTYFDDSSSSYMFMDVASFEEVACDADVLGSKASFLKDGMEVAGIKWNEKIIDVELPQTMVYEVVETDPGVKGNTVQGGTKPATLDGGAVVAVPLFVEQGEMIKVDTKEGKYLSRAAE 227
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BLAST of mRNA_Ecto-sp9_F_contig107.619.1 vs.
Match: Hypothetical (protein n=3 Tax=Diacronema lutheri TaxID=2081491 RepID=A0A7R9YPI6_DIALT)

HSP 1 Score: 215 bits (548), Expect = 1.370e-63
Identity = 109/188 (57.98%), Postives = 138/188 (73.40%), Query Frame = 1 
Query:  205 ALSMGSTADFKNGMTIDIDGNPCKILEFLHVKPGKGSAFVRTKVKNLITGNSLEKTFRAGEPVEQAQVDKLDLQYTYKEGDMYYFMDSATYEEISIAEKVVGDKAGFFLEGMELSATYFKGKVIEVTLPKQMILEVVETDPGEKGNTAQGATKPAKVAAGAMINVPLFITTGEKIRVDTDSKKYMERA 768
            A+SM ++ DFK GMTI+ D  P K++EFLHVKPGKGSAFVR+K+KNLITGN++EKT+RAGE V  A+V+K D+QYTYKEGD Y FMD A++EE+ I  K + D+  F  E        + G++I V LP QM L+V+ET PG KGNT QG  KPA +  GA+I VPLFI  GE++RVDT  KKY+ RA
Sbjct:    9 AVSMLTSNDFKVGMTIESDAVPYKVIEFLHVKPGKGSAFVRSKLKNLITGNTMEKTWRAGESVGAAEVEKFDVQYTYKEGDQYVFMDMASFEEMRIDAKAI-DQIDFLKESGSAQVAKWNGQIISVELPNQMNLKVIETMPGVKGNTVQGGQKPATLETGAVIQVPLFIEEGEEVRVDTIEKKYLSRA 195
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BLAST of mRNA_Ecto-sp9_F_contig107.619.1 vs.
Match: Uncharacterized (protein n=1 Tax=Cyanidiococcus yangmingshanensis TaxID=2690220 RepID=A0A7J7IJD2_9RHOD)

HSP 1 Score: 217 bits (552), Expect = 2.620e-63
Identity = 104/183 (56.83%), Postives = 137/183 (74.86%), Query Frame = 1 
Query:  220 STADFKNGMTIDIDGNPCKILEFLHVKPGKGSAFVRTKVKNLITGNSLEKTFRAGEPVEQAQVDKLDLQYTYKEGDMYYFMDSATYEEISIAEKVVGDKAGFFLEGMELSATYFKGKVIEVTLPKQMILEVVETDPGEKGNTAQGATKPAKVAAGAMINVPLFITTGEKIRVDTDSKKYMERA 768
            S+ DF+ G+TI++DG+P K++E LHVKPGKG+AFVRTK+KNL+TGNS+E+TFRAGE V +AQV+K+++QYTY E   Y FM+  T+EE  I    VGD A +   G ++S T + GK IEV +P  M LEVVETDPG +GNTAQG +KPAK+  G +I VPLFI  GEK++VDT +  Y+ R 
Sbjct:   79 SSNDFRVGLTIEVDGSPFKVIEHLHVKPGKGAAFVRTKLKNLLTGNSMERTFRAGESVPEAQVEKVEMQYTYAEESDYVFMNMTTFEEERIPASTVGDTAKYLRTGQDVSVTKWNGKPIEVEVPTTMTLEVVETDPGVRGNTAQGGSKPAKLETGVVIQVPLFINVGEKVKVDTRTGTYLSRG 261
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BLAST of mRNA_Ecto-sp9_F_contig107.619.1 vs.
Match: Elongation (factor P n=4 Tax=Synechococcus elongatus TaxID=32046 RepID=EFP_SYNE7)

HSP 1 Score: 214 bits (544), Expect = 3.510e-63
Identity = 105/184 (57.07%), Postives = 135/184 (73.37%), Query Frame = 1 
Query:  214 MGSTADFKNGMTIDIDGNPCKILEFLHVKPGKGSAFVRTKVKNLITGNSLEKTFRAGEPVEQAQVDKLDLQYTYKEGDMYYFMDSATYEEISIAEKVVGDKAGFFLEGMELSATYFKGKVIEVTLPKQMILEVVETDPGEKGNTAQGATKPAKVAAGAMINVPLFITTGEKIRVDTDSKKYMER 765
            M S+ DF+ G TI+IDG   +++EFLHVKPGKGSAFVRTK+KN  TGN +EKTFRAGE V QA ++K  LQYTYK+GD + FMD  TYEE  +    +GD+  +  EGME +   + G+VIEV LP  ++LEV+ETDPG KG+TA G TKPAKV  GA + VPLFI+ GE+I++DT +  Y+ R
Sbjct:    1 MISSNDFRTGTTIEIDGAVWRVVEFLHVKPGKGSAFVRTKLKNAKTGNVVEKTFRAGETVPQAVLEKSTLQYTYKDGDDFVFMDMETYEEGRLTAATIGDRVKYLKEGMEANVITWNGQVIEVELPNSVVLEVIETDPGVKGDTATGGTKPAKVETGAQVMVPLFISVGERIKIDTRNDSYLGR 184
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BLAST of mRNA_Ecto-sp9_F_contig107.619.1 vs.
Match: Elongation (factor P n=1 Tax=bacterium TaxID=1869227 RepID=A0A7V5I583_9BACT)

HSP 1 Score: 213 bits (543), Expect = 5.090e-63
Identity = 101/180 (56.11%), Postives = 136/180 (75.56%), Query Frame = 1 
Query:  229 DFKNGMTIDIDGNPCKILEFLHVKPGKGSAFVRTKVKNLITGNSLEKTFRAGEPVEQAQVDKLDLQYTYKEGDMYYFMDSATYEEISIAEKVVGDKAGFFLEGMELSATYFKGKVIEVTLPKQMILEVVETDPGEKGNTAQGATKPAKVAAGAMINVPLFITTGEKIRVDTDSKKYMERA 768
            DF+ G+TI++DG+P K++E LHVKPGKG+AFVRTK+KNL+TGN++E+TFRAGE V +AQV+K + QYTY   + Y FM+ AT+EE  +  +VVGD A +   G ++S T + GK IEV +P  + LEVVETDPG +GNTAQG +KPAK+  G ++ VPLFI  GEKI+VDT +  Y+ R 
Sbjct:    7 DFRVGLTIEVDGSPFKVIEHLHVKPGKGAAFVRTKLKNLLTGNTMERTFRAGETVPEAQVEKFEAQYTYPAENEYVFMNMATFEEEHVPNEVVGDTAKYLRVGQDVSVTKWNGKPIEVEVPATLTLEVVETDPGVRGNTAQGGSKPAKLETGVVVQVPLFIEVGEKIKVDTRTGSYLSRG 186
[Close]
BLAST of mRNA_Ecto-sp9_F_contig107.619.1 vs.
Match: elongation (factor P n=1 Tax=Myxosarcina sp. GI1 TaxID=1541065 RepID=UPI00055CAF5D)

HSP 1 Score: 213 bits (542), Expect = 7.160e-63
Identity = 102/184 (55.43%), Postives = 141/184 (76.63%), Query Frame = 1 
Query:  214 MGSTADFKNGMTIDIDGNPCKILEFLHVKPGKGSAFVRTKVKNLITGNSLEKTFRAGEPVEQAQVDKLDLQYTYKEGDMYYFMDSATYEEISIAEKVVGDKAGFFLEGMELSATYFKGKVIEVTLPKQMILEVVETDPGEKGNTAQGATKPAKVAAGAMINVPLFITTGEKIRVDTDSKKYMER 765
            M S+ DF+ G+TI++DG+  +++EFLHVKPGKGSAFVRTK+KN+ TGNS+E+TFRAGE V QA ++K  +Q+TYKEGD Y FMD  TYEE  ++E+ +GD+  +  E ME++  +++ +V+EV LP  +ILE+ +TDPG KG+TA G TKPA V +GA + VPLFI+ GEKI+VDT    Y+ R
Sbjct:    1 MISSNDFRTGVTIELDGSVWRVVEFLHVKPGKGSAFVRTKLKNVQTGNSVERTFRAGETVPQANLEKRTMQHTYKEGDQYVFMDMETYEETRMSEEQMGDRVQYLKEEMEVNVIFWEDQVLEVELPTSVILEITDTDPGVKGDTATGGTKPAIVESGAQVMVPLFISIGEKIKVDTRDGSYLGR 184
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp9_F_contig107.619.1 vs.
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Ectocarpus species9 EcSCA_722f female vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
Elongation1.250e-16996.51factor P n=1 Tax=Ectocarpus siliculosus TaxID=2880... [more]
Uncharacterized6.580e-12498.93protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=... [more]
Elongation2.330e-7257.22factor P (EF-P) KOW-like domain-containing protein... [more]
Elongation1.540e-6555.43factor P n=3 Tax=Cyanobacteria TaxID=1117 RepID=K9... [more]
Hypothetical5.860e-6555.79protein n=1 Tax=Pinguiococcus pyrenoidosus TaxID=1... [more]
Hypothetical1.370e-6357.98protein n=3 Tax=Diacronema lutheri TaxID=2081491 R... [more]
Uncharacterized2.620e-6356.83protein n=1 Tax=Cyanidiococcus yangmingshanensis T... [more]
Elongation3.510e-6357.07factor P n=4 Tax=Synechococcus elongatus TaxID=320... [more]
Elongation5.090e-6356.11factor P n=1 Tax=bacterium TaxID=1869227 RepID=A0A... [more]
elongation7.160e-6355.43factor P n=1 Tax=Myxosarcina sp. GI1 TaxID=1541065... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp9_F_contig107contigEcto-sp9_F_contig107:16854..22318 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 of Ectocarpus species9 EcSCA_722f female vs UniRef902022-09-19
OGS1.0 of Ectocarpus species9 EcSCA_722f female2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score490.7
Seed ortholog evalue4.1e-136
Seed eggNOG ortholog2880.D7FX61
KEGG koko:K02356
EggNOG free text desc.Elongation factor P, C-terminal
EggNOG OGs2QSVF@2759,COG0231@1
COG Functional cat.J
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko03012
Hectar predicted targeting categoryother localisation
Ec32 ortholog descriptionelongation factor P
Ec32 orthologEc-10_004410.1
Exons6
Model size1617
Cds size777
Stop1
Start1
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622928288.789663-CDS-Ecto-sp9_F_contig107:16853..169641622928288.789663-CDS-Ecto-sp9_F_contig107:16853..16964Ectocarpus species9 EcSCA_722f femaleCDSEcto-sp9_F_contig107 16854..16964 +
1692277822.6624389-CDS-Ecto-sp9_F_contig107:16853..169641692277822.6624389-CDS-Ecto-sp9_F_contig107:16853..16964Ectocarpus species9 EcSCA_722f femaleCDSEcto-sp9_F_contig107 16854..16964 +
1622928288.804238-CDS-Ecto-sp9_F_contig107:17793..179441622928288.804238-CDS-Ecto-sp9_F_contig107:17793..17944Ectocarpus species9 EcSCA_722f femaleCDSEcto-sp9_F_contig107 17794..17944 +
1692277822.6744695-CDS-Ecto-sp9_F_contig107:17793..179441692277822.6744695-CDS-Ecto-sp9_F_contig107:17793..17944Ectocarpus species9 EcSCA_722f femaleCDSEcto-sp9_F_contig107 17794..17944 +
1622928288.819193-CDS-Ecto-sp9_F_contig107:19016..191351622928288.819193-CDS-Ecto-sp9_F_contig107:19016..19135Ectocarpus species9 EcSCA_722f femaleCDSEcto-sp9_F_contig107 19017..19135 +
1692277822.6834016-CDS-Ecto-sp9_F_contig107:19016..191351692277822.6834016-CDS-Ecto-sp9_F_contig107:19016..19135Ectocarpus species9 EcSCA_722f femaleCDSEcto-sp9_F_contig107 19017..19135 +
1622928288.8411314-CDS-Ecto-sp9_F_contig107:19766..199341622928288.8411314-CDS-Ecto-sp9_F_contig107:19766..19934Ectocarpus species9 EcSCA_722f femaleCDSEcto-sp9_F_contig107 19767..19934 +
1692277822.6926007-CDS-Ecto-sp9_F_contig107:19766..199341692277822.6926007-CDS-Ecto-sp9_F_contig107:19766..19934Ectocarpus species9 EcSCA_722f femaleCDSEcto-sp9_F_contig107 19767..19934 +
1622928288.862903-CDS-Ecto-sp9_F_contig107:20626..207401622928288.862903-CDS-Ecto-sp9_F_contig107:20626..20740Ectocarpus species9 EcSCA_722f femaleCDSEcto-sp9_F_contig107 20627..20740 +
1692277822.703259-CDS-Ecto-sp9_F_contig107:20626..207401692277822.703259-CDS-Ecto-sp9_F_contig107:20626..20740Ectocarpus species9 EcSCA_722f femaleCDSEcto-sp9_F_contig107 20627..20740 +
1622928288.8927913-CDS-Ecto-sp9_F_contig107:21364..214781622928288.8927913-CDS-Ecto-sp9_F_contig107:21364..21478Ectocarpus species9 EcSCA_722f femaleCDSEcto-sp9_F_contig107 21365..21478 +
1692277822.7238672-CDS-Ecto-sp9_F_contig107:21364..214781692277822.7238672-CDS-Ecto-sp9_F_contig107:21364..21478Ectocarpus species9 EcSCA_722f femaleCDSEcto-sp9_F_contig107 21365..21478 +


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622928288.9091268-UTR-Ecto-sp9_F_contig107:21478..223181622928288.9091268-UTR-Ecto-sp9_F_contig107:21478..22318Ectocarpus species9 EcSCA_722f femaleUTREcto-sp9_F_contig107 21479..22318 +
1692277822.7337818-UTR-Ecto-sp9_F_contig107:21478..223181692277822.7337818-UTR-Ecto-sp9_F_contig107:21478..22318Ectocarpus species9 EcSCA_722f femaleUTREcto-sp9_F_contig107 21479..22318 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp9_F_contig107.619.1prot_Ecto-sp9_F_contig107.619.1Ectocarpus species9 EcSCA_722f femalepolypeptideEcto-sp9_F_contig107 16854..21478 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_Ecto-sp9_F_contig107.619.1

>prot_Ecto-sp9_F_contig107.619.1 ID=prot_Ecto-sp9_F_contig107.619.1|Name=mRNA_Ecto-sp9_F_contig107.619.1|organism=Ectocarpus species9 EcSCA_722f female|type=polypeptide|length=259bp
MDDSIIGPNRWIDRSERSGLGLLGVEAFVLPSATLRQGSFAQQQQQQRGV
TRWTAAAGPRTARGGGVGALSMGSTADFKNGMTIDIDGNPCKILEFLHVK
PGKGSAFVRTKVKNLITGNSLEKTFRAGEPVEQAQVDKLDLQYTYKEGDM
YYFMDSATYEEISIAEKVVGDKAGFFLEGMELSATYFKGKVIEVTLPKQM
ILEVVETDPGEKGNTAQGATKPAKVAAGAMINVPLFITTGEKIRVDTDSK
KYMERAKE*
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mRNA from alignment at Ecto-sp9_F_contig107:16854..22318+

Legend: CDSpolypeptideUTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_Ecto-sp9_F_contig107.619.1 ID=mRNA_Ecto-sp9_F_contig107.619.1|Name=mRNA_Ecto-sp9_F_contig107.619.1|organism=Ectocarpus species9 EcSCA_722f female|type=mRNA|length=5465bp|location=Sequence derived from alignment at Ecto-sp9_F_contig107:16854..22318+ (Ectocarpus species9 EcSCA_722f female)
ATGGATGATTCGATCATCGGTCCGAACCGATGGATCGATCGATCGGAACG
ATCAGGCCTCGGGCTCTTGGGGGTCGAGGCGTTCGTCTTGCCGTCGGCGA
CTCTCCGACAGGTGAGCCACAGCGGTACTGCATTACCCAGCACCAACAAC
ACCGGTACGTTGCTGCCGCCCTTTGCGGTAGCTGAGGTCTTGTCGAGAGG
TCTCGTGTCGAGTGAGGGTCCTGTTGGGGAACACTCCCCTCAGACGCAGC
ACCTCTGCCCAGGAGCACGCAATACAGCACCGACACGGAAAGAAGAAACG
TCAATAATCGGGTCGAGGCTCAGCTTCTTGATTTACCGCCACTGTCGACC
ACATGCTGTATGTTTTTTATAGATCAGTCAGCGCTGACTAAGTAGCATAG
TGGATAAGTCTTTGTCTAACATAGATCCACCGCTGACCTGTTTTGTGCTG
TACCCTATTTTCTTATTTTCGGTTAAAATTTGAGCCCATCCTTCTTGACA
AAATATTTCTACACTTGGGGGTATGTTGATTTACAAAGTATTTCGAAGTT
GTGGTAGAGTCAGTAGTTTGTCTCGTAACAAAATATTTCGAAGTTGCGGT
GGAGTCAGTAGTTTGTGTCGTAACGTGCCTTCCACAGCCGTGTCGATGCT
GCCCTGCAGCACGCAATGAATTTTTCGCTATCGGCATTTATTTCATTTGG
TGTCGGAACGCGCCTTCCATAACCGTGTCGAATACACACGTCCCGCACCC
CACCCTCGACCCCCCCAACTCGCTACCTGAACATGCAAACCCCTTCGTGC
AGCTCGGCGCACTCATTGTTTTATTCTCCGACGCACGCGGCTAGGGAGGA
ATTTTGAAGCGTCTTGATAACCCCGCATGCCGAGTATGACCTTGCCCCCC
CTGGGCCCTTCACCGTGCGTGTGTTTCTTGATGGTTGTAGGGATCGTTTG
CGCAGCAGCAGCAGCAGCAGCGAGGAGTAACGCGATGGACGGCCGCCGCG
GGTCCGCGAACGGCGAGGGGCGGGGGGGTGGGGGCGCTGTCGATGGGGTC
TACGGCAGACTTCAAGAACGGGATGACCATCGACATTGACGGTGCGGTGG
CGTATGTGTGCATTTATCGCTAGCTTCGTCCGCGCCAACCGGCCGACCAA
ATGTTGTGGTGTGTATTTATTCTTAAGTGTCAACTGCACTAACCGACTGA
CGAATGAAAATACGTCAGTTCCAGTGCGGCTGAAAACGTATATTTTCTCT
ATTGTGTGTGTGATGGTGTGGTATCTGCCTGGCTTGAAGGATGGTGCTGT
TTGGTTTTTCTCTTCTCTCGTGTTCTGCTGTGAGGTCGCTGTGTTCGTAT
GTGTTTCGGTTGATTTCGTGTGTGTTTCGGTTGATTTCTCGTGTTTTTGG
GTCGCCGGGAGGTTTGGGTGCGTTCCGGCACACTGCTGCTGGCCTGCATG
CTTGTTAGCTCGCTGGTTGGCGTTGTTTAGTCGTTCACGCTGACGGCCTT
CATGGTCCAATGTAGAGCACCCCCAGTAAGGCAGCCATGCGCCAGGCACT
TTGACGTGCTCCCTGTACCACTGGTGCGTGCGTGGTGTGTGCTTCCCGCA
AATGGACAAAGGGCGGTGCTGCTACAAGCGCCTGGTCGTGGCTCGTTTGT
GCGATGAGGAAAAATACGAAGATACAGAACATAGCCTTGTGGTAAAACAT
CTCGTTGTCTTCATGCAACACACTTTGACGTGGCGCACGAGCTGCTTGGT
GGTATGACCGACCGTGCCCCACCCGAATAGGCAGTAGATCACGGGATGTT
TGCGGGTGGCGTCTATTTGTATTGCGGCACGACGCGAAGAGCGGGACAAC
TCCATGGCAGTAGCTTGGTTCAGACCAAGGATCCATTCCTATTTACTGGT
GCTCCGACCACGAACGCCCCCGCCCACGCCTAGTTTATCTCCGAGTTTCG
CGTCTTTGGCTTTGGAGGTGTGTGCGAAGCCGCGACACTGGAACCACCAC
AGTGTTTGAATGTCGGCAGCTTTCTTTGTCCTTTGTTTTTTTTTCCCTCT
CAGTGGCTCGGAACCTTCGCCAGTGATTCCACAACCGCGTTGCGCCCGTC
GACGCGATGGGTTTGCTCGTGACTCTCCCCACCCGATGCTCTCGTTGCCG
TCCCGCTACCCAGGCAACCCTTGCAAGATTCTGGAGTTCTTGCACGTTAA
GCCGGGCAAGGGGTCGGCGTTCGTGCGAACAAAGGTCAAGAACCTCATCA
CGGGCAACTCTTTGGAGAAGACATTTCGGGCGGTGAGAGGAGAAAAGGAT
GAAAGCTGCTCAGCTTTGGTGTTGGTGTTGCGATTGTATCTGGTGGGGTC
CCCGCAGATTGAACGGCTGCCTTACAGGATGCCCTCGCAGAGAGAGAGAG
AGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAACCCGAACC
TTGTGTTTTATATTATTGCGGGGAAGATTCCACTTCTTGATGCCGTCGTG
CGCGCTCGTCGCGCTTCAAGAAAACAGGGCGACCTACCCAAACTCCACGG
CGCAGTCTATTGAAGCCGAAATCAAACCATTGCACTAATCAGCTATCACT
AGTCTAATGGTGTGATTTGGCTTCTTTAAGTCGAATCAAGCCTGCAGTCC
TTGCGGATTTGCAGCACCCTGACTAGTCGAATGATTTGATGTCCGCTTCG
ATAAATCGCATCAAGCCTGCAGTCCGCGCGGACCTGCAGCACAGGCATCC
TGGTATTGATATTGGGTCGTGCATGTTCGACCAGGCGTCGTTTTATTTGT
TCAACATTCAACGCCGGACACGCGCATGCCATCATGATACCCTCCTTCCC
TCCGTGCCCAAACACTCTCGTTGCTGTCACTCTGGCGTGTGGCACCGCCT
TGCACGAAATCAGGGAGAACCGGTAGAACAAGCGCAGGTGGACAAGCTCG
ACCTGCAGTACACGTACAAGGAAGGGGACATGTACTACTTCATGGACTCG
GCAACCTACGAAGAAATCTCCATCGCGGAGAAGGTTGTGGGGGACAAGGC
GGGTTTCTTCCTGGAGGGGATGGAGCTTTCGGTAAGCGGGGGGCGGGGGG
GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGCGGGGCGGGGGGCAGGG
GGGGGGGCGGGGGGGGGGGGCATGCCGTAGTGGTCAGGCCTGGAAACCTC
GCATCCCTATGGGGCGATATGCCGTGTTTTCGCCGGTCCAGGGTAGGTAG
GTTTGACGAGGATCATCCAGAAGCTGGCCAACCTCCTTGCGTTTTTGTGA
ACCAGATATTCCGCAGAGGTCTTGAGAAGGTTTGCGTGGGCCGGATGATT
TCGTTTGTGGAGAGGGAGGGAGCGGGCTACAAGGGTAGACAAAGCTGGCG
CGCCAGGATCAGCTCCTTCGAGCGGATGGCCGACCGTTTTGGATTGGCTT
GCTGAGTGGCCAGCGGTTGGTGCTTTCGAGAGGGCTGTGGTACGGGTTTT
CAACAAGTGGTTGTGTGTTCGGGCTAGTCTATGTATCATAGGGCTGTAGG
TTGGAGTAGTCTGGTTCTCCCTGTGGAACTTAAATTTCAGAGGCACCGCC
GTAAACTTCCAGCTCAACTGCCCGCCCCCAAGTGAAGTGTCTTGCATCGA
TGCGAAGATGGTATACCACGATGATTGATACTTCCCCATGTAGGGGACCC
TCCCATATAACGAACGCAACCTCTTTTCGATTCCGCGAACCTCTTCCCCA
CGCCCACTCCCTCCCACGCGCAGGCTACGTACTTCAAGGGGAAGGTGATC
GAGGTGACCCTGCCGAAGCAGATGATCCTTGAGGTGGTGGAAACGGACCC
GGGGGAGAAGGGGAACACCGCGCAGGGAGCAACAAAGGTAATTATCGTCC
GGAGAAGGAATATTATCGTTCGGAGACCGCAATTTATCGTTCGGAGAACC
CAAAACTATCGTTAGGAGAACTCAAAATTATCGTTCGGAGAACACAAATC
ATCGTCGGGAGAAGGCAAGTACTACATGGCAGCAGTTGTTTTGGCAGGGC
AGCACCCCCCCGCGTCCCGCGTTGTTTCGATGGACTCGTTGTAGATACGC
CAGCCGTTGCCTTCGGGACATGGTGGTCGAATGGCCAAGCCTTTTCTTGA
TTGATTGCACCCGGCGAAGGACGTTTACATGCCGGGTTCGGCTCTGCATG
CACGTACCACTCACGTGTTTCGTCGTTTGGAGGTAGAAGTATTGTATGCA
TAGACGTCTATGATAGGACGGGTAGTCTGGTGCAGACGGCAGCAGTTATT
CCGCACTTTGTTTACTCGAAGCGAACGGTCGGATGGCCGTGGCAAGCAAC
GTGGCCGTGGCAAGCAACGTGGCCGTGGCCAGCAATATCAGATGGTCCCC
CCGCCCCCCAGCCCACCCCACCTCACTTCCACTCCCTCCCTAATTACTTT
ACCGCCGGCCGCGCCCTTTGAAATGTCGTGTGATGCACGCGCTTACATTT
TTTTCCCGCAGCCAGCCAAGGTGGCCGCTGGGGCGATGATCAACGTGCCC
CTGTTCATCACCACCGGCGAGAAGATTAGGGTTGACACCGATTCCAAGAA
GTACATGGAGCGCGCAAAAGAGTGATATCGCTAGTGATAACGCTGTGTGC
TGCTCGGGAAATCGTGGAAATACAGGTAGCCTTCGCTGACGCTATGGATT
CATTGCTAATCTACCTTGGACTCTTTTCTTGGATGGAGATGGATTCGTTG
GGTCATATTAGGAAAAAAATAAAAACCCAAGAGTGATTGATTCCTTCAAC
TAGGGCGGTCTACGATAGAGATACACCGCTTCTATACTGATGCGGTTGCT
TGCGCAGCATTCGTTTGGAGCTTTTTTGGCGTTTAGAAGGTCGCACGTGT
GGAACGATGCGCCATTGGGGGTTGGGGGCGCGCTCCGGGGGCTGGTACGT
GAGGCAACGGTTGCGTCTGTCGCCATTATTGGGGCGGTTTGTCTAGTCAA
TCAATAGTTCGATGTGATTCTTCCCCGTTTGTTTGGAGGGATCGGACATG
CCGGAGTACGTGCGTTGTGCGGGTATGACACTATTAATAGTCGCTCTCTG
TCAAGATAGGTGCGGTCCTACGCTTGCGCGTCGTTCCCGAACAGAACACA
CTCGACATTACTGTCGTTGTGCACCTGAACTTTGCGGAAATTACTTGGAG
TTTGTGTACCGCTGGTTTAACGTGCCGCACCACAGAGCAGGCGGCGTTCC
TTTGAAAGAAAAAAGAAGAAAAGAAACTGAAATTTGCTTCTTCGTGTGTG
CATATTTCAGTAGGCCCGGCGGTAAGCGGGGCTCGCGAAGGACATGGACA
GACCTTTGTCTTGGTTGATTTCGAGGGTGAAGCTGTTATTATCCTTTGAC
ATGTTGTAAATACGCAGACAGCCGTTGGGAGTATCCATGTCCCGACTGAC
CAAGGCGACCCATCC
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Coding sequence (CDS) from alignment at Ecto-sp9_F_contig107:16854..22318+

>mRNA_Ecto-sp9_F_contig107.619.1 ID=mRNA_Ecto-sp9_F_contig107.619.1|Name=mRNA_Ecto-sp9_F_contig107.619.1|organism=Ectocarpus species9 EcSCA_722f female|type=CDS|length=1554bp|location=Sequence derived from alignment at Ecto-sp9_F_contig107:16854..22318+ (Ectocarpus species9 EcSCA_722f female)
ATGGATGATTCGATCATCGGTCCGAACCGATGGATCGATCGATCGGAACG
ATCAGGCCTCGGGCTCTTGGGGGTCGAGGCGTTCGTCTTGCCGTCGGCGA
CTCTCCGACAGATGGATGATTCGATCATCGGTCCGAACCGATGGATCGAT
CGATCGGAACGATCAGGCCTCGGGCTCTTGGGGGTCGAGGCGTTCGTCTT
GCCGTCGGCGACTCTCCGACAGGGATCGTTTGCGCAGCAGCAGCAGCAGC
AGCGAGGAGTAACGCGATGGACGGCCGCCGCGGGTCCGCGAACGGCGAGG
GGCGGGGGGGTGGGGGCGCTGTCGATGGGGTCTACGGCAGACTTCAAGAA
CGGGATGACCATCGACATTGACGGGATCGTTTGCGCAGCAGCAGCAGCAG
CAGCGAGGAGTAACGCGATGGACGGCCGCCGCGGGTCCGCGAACGGCGAG
GGGCGGGGGGGTGGGGGCGCTGTCGATGGGGTCTACGGCAGACTTCAAGA
ACGGGATGACCATCGACATTGACGGCAACCCTTGCAAGATTCTGGAGTTC
TTGCACGTTAAGCCGGGCAAGGGGTCGGCGTTCGTGCGAACAAAGGTCAA
GAACCTCATCACGGGCAACTCTTTGGAGAAGACATTTCGGGCGGCAACCC
TTGCAAGATTCTGGAGTTCTTGCACGTTAAGCCGGGCAAGGGGTCGGCGT
TCGTGCGAACAAAGGTCAAGAACCTCATCACGGGCAACTCTTTGGAGAAG
ACATTTCGGGCGGGAGAACCGGTAGAACAAGCGCAGGTGGACAAGCTCGA
CCTGCAGTACACGTACAAGGAAGGGGACATGTACTACTTCATGGACTCGG
CAACCTACGAAGAAATCTCCATCGCGGAGAAGGTTGTGGGGGACAAGGCG
GGTTTCTTCCTGGAGGGGATGGAGCTTTCGGGAGAACCGGTAGAACAAGC
GCAGGTGGACAAGCTCGACCTGCAGTACACGTACAAGGAAGGGGACATGT
ACTACTTCATGGACTCGGCAACCTACGAAGAAATCTCCATCGCGGAGAAG
GTTGTGGGGGACAAGGCGGGTTTCTTCCTGGAGGGGATGGAGCTTTCGGC
TACGTACTTCAAGGGGAAGGTGATCGAGGTGACCCTGCCGAAGCAGATGA
TCCTTGAGGTGGTGGAAACGGACCCGGGGGAGAAGGGGAACACCGCGCAG
GGAGCAACAAAGGCTACGTACTTCAAGGGGAAGGTGATCGAGGTGACCCT
GCCGAAGCAGATGATCCTTGAGGTGGTGGAAACGGACCCGGGGGAGAAGG
GGAACACCGCGCAGGGAGCAACAAAGCCAGCCAAGGTGGCCGCTGGGGCG
ATGATCAACGTGCCCCTGTTCATCACCACCGGCGAGAAGATTAGGGTTGA
CACCGATTCCAAGAAGTACATGGAGCGCGCAAAAGAGTGACCAGCCAAGG
TGGCCGCTGGGGCGATGATCAACGTGCCCCTGTTCATCACCACCGGCGAG
AAGATTAGGGTTGACACCGATTCCAAGAAGTACATGGAGCGCGCAAAAGA
GTGA
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