mRNA_Ecto-sp9_F_contig10680.608.1 (mRNA) Ectocarpus species9 EcSCA_722f female

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_Ecto-sp9_F_contig10680.608.1
Unique NamemRNA_Ecto-sp9_F_contig10680.608.1
TypemRNA
OrganismEctocarpus species9 EcSCA_722f female (Ectocarpus species9 EcSCA_722f female)
Homology
[Close]
BLAST of mRNA_Ecto-sp9_F_contig10680.608.1 vs.
Match: H(+)-transporting (two-sector ATPase n=4 Tax=Phaeophyceae TaxID=2870 RepID=D8LGA9_ECTSI)

HSP 1 Score: 526 bits (1355), Expect = 2.820e-183
Identity = 269/270 (99.63%), Postives = 269/270 (99.63%), Query Frame = 1 
Query:    1 FSSVQGGTCAVPGAFGCGKTVISQSLSKFSNSDAIVYVGCGERGNEMAEVLNEFPELTIDVKGKEVGIMKRTTLVANTSNMPVAAREASIYTGITLAEYFRDMGMNVSMMADSTSRWAEALREISGRLGEMPADSGYPAYLGARLAAFYERAGRASCIGSPGREGTVTVVGAVSPPGGDFSDPVTAATLSIVQVFWGLDKKLAQRKHFPSLNWLISYTKYMRVLEPFFNSYDDNYSELRTRCRDILQQEDSLSEIVQLVGRDSLSEDQKV 810
            F SVQGGTCAVPGAFGCGKTVISQSLSKFSNSDAIVYVGCGERGNEMAEVLNEFPELTIDVKGKEVGIMKRTTLVANTSNMPVAAREASIYTGITLAEYFRDMGMNVSMMADSTSRWAEALREISGRLGEMPADSGYPAYLGARLAAFYERAGRASCIGSPGREGTVTVVGAVSPPGGDFSDPVTAATLSIVQVFWGLDKKLAQRKHFPSLNWLISYTKYMRVLEPFFNSYDDNYSELRTRCRDILQQEDSLSEIVQLVGRDSLSEDQKV
Sbjct:  242 FPSVQGGTCAVPGAFGCGKTVISQSLSKFSNSDAIVYVGCGERGNEMAEVLNEFPELTIDVKGKEVGIMKRTTLVANTSNMPVAAREASIYTGITLAEYFRDMGMNVSMMADSTSRWAEALREISGRLGEMPADSGYPAYLGARLAAFYERAGRASCIGSPGREGTVTVVGAVSPPGGDFSDPVTAATLSIVQVFWGLDKKLAQRKHFPSLNWLISYTKYMRVLEPFFNSYDDNYSELRTRCRDILQQEDSLSEIVQLVGRDSLSEDQKV 511
[Close]
BLAST of mRNA_Ecto-sp9_F_contig10680.608.1 vs.
Match: H(+)-transporting (two-sector ATPase n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z7J8_9STRA)

HSP 1 Score: 487 bits (1254), Expect = 5.720e-168
Identity = 248/270 (91.85%), Postives = 256/270 (94.81%), Query Frame = 1 
Query:    1 FSSVQGGTCAVPGAFGCGKTVISQSLSKFSNSDAIVYVGCGERGNEMAEVLNEFPELTIDVKGKEVGIMKRTTLVANTSNMPVAAREASIYTGITLAEYFRDMGMNVSMMADSTSRWAEALREISGRLGEMPADSGYPAYLGARLAAFYERAGRASCIGSPGREGTVTVVGAVSPPGGDFSDPVTAATLSIVQVFWGLDKKLAQRKHFPSLNWLISYTKYMRVLEPFFNSYDDNYSELRTRCRDILQQEDSLSEIVQLVGRDSLSEDQKV 810
            F SV GGTCAVPGAFGCGKTVISQSLSKFSNSDAI+YVGCGERGNEMAEVL EFPELT  V GKEVGIMKRT LVANTSNMPVAAREASIYTG+TLAEYFRDMGMNVSMMADSTSRWAEALREISGRLGEMPADSGYPAYLGARLAAFYERAGR SC+GSPGREGTVTVVGAVSPPGGDFSDPVTAATLSIVQVFWGLDKKLAQRKHFPS+NWLISYTKYMRVLEPFFN Y+ +Y  LR R R+ILQQED+LSEIVQLVGRDSLSEDQKV
Sbjct:  242 FPSVLGGTCAVPGAFGCGKTVISQSLSKFSNSDAIIYVGCGERGNEMAEVLAEFPELTTTVNGKEVGIMKRTCLVANTSNMPVAAREASIYTGVTLAEYFRDMGMNVSMMADSTSRWAEALREISGRLGEMPADSGYPAYLGARLAAFYERAGRVSCLGSPGREGTVTVVGAVSPPGGDFSDPVTAATLSIVQVFWGLDKKLAQRKHFPSVNWLISYTKYMRVLEPFFNEYNPDYGSLRNRVREILQQEDALSEIVQLVGRDSLSEDQKV 511
[Close]
BLAST of mRNA_Ecto-sp9_F_contig10680.608.1 vs.
Match: H(+)-transporting (two-sector ATPase (Fragment) n=1 Tax=Symbiodinium microadriaticum TaxID=2951 RepID=A0A812TT90_SYMMI)

HSP 1 Score: 476 bits (1224), Expect = 3.360e-166
Identity = 242/271 (89.30%), Postives = 257/271 (94.83%), Query Frame = 1 
Query:    1 FSSVQGGTCAVPGAFGCGKTVISQSLSKFSNSDAIVYVGCGERGNEMAEVLNEFPELTIDVKGKEVGIMKRTTLVANTSNMPVAAREASIYTGITLAEYFRDMGMNVSMMADSTSRWAEALREISGRLGEMPADSGYPAYLGARLAAFYERAGRASCIGSPGREGTVTVVGAVSPPGGDFSDPVTAATLSIVQVFWGLDKKLAQRKHFPSLNWLISYTKYMRVLEPFFNS-YDDNYSELRTRCRDILQQEDSLSEIVQLVGRDSLSEDQKV 810
            F SV GGTCAVPGAFGCGKTVISQ+LSK+SNSDAIVYVGCGERGNEMAEVL EFPELT+   GKEVGIMKRTTLVANTSNMPVAAREASIYTGITLAEYFRD GMNVSMMADSTSRWAEALREISGRLGEMPADSGYPAYLGARLAAFYERAGR  C+GSP REGTV++VGAVSPPGGDFSDPVTAATLSIVQVFWGLDKKLAQRKHFPS+NWLISYTKYMRVLEPFFN+ YD+NYS+LR + RDIL Q+D+LSEIVQLVG++SLSEDQKV
Sbjct:   79 FPSVLGGTCAVPGAFGCGKTVISQTLSKYSNSDAIVYVGCGERGNEMAEVLAEFPELTMTFNGKEVGIMKRTTLVANTSNMPVAAREASIYTGITLAEYFRDQGMNVSMMADSTSRWAEALREISGRLGEMPADSGYPAYLGARLAAFYERAGRVRCLGSPDREGTVSIVGAVSPPGGDFSDPVTAATLSIVQVFWGLDKKLAQRKHFPSVNWLISYTKYMRVLEPFFNTTYDENYSKLRNKARDILAQQDNLSEIVQLVGKESLSEDQKV 349
[Close]
BLAST of mRNA_Ecto-sp9_F_contig10680.608.1 vs.
Match: H(+)-transporting (two-sector ATPase n=2 Tax=Pelagomonadales TaxID=54409 RepID=F0Y5V6_AURAN)

HSP 1 Score: 479 bits (1232), Expect = 1.150e-164
Identity = 242/270 (89.63%), Postives = 254/270 (94.07%), Query Frame = 1 
Query:    1 FSSVQGGTCAVPGAFGCGKTVISQSLSKFSNSDAIVYVGCGERGNEMAEVLNEFPELTIDVKGKEVGIMKRTTLVANTSNMPVAAREASIYTGITLAEYFRDMGMNVSMMADSTSRWAEALREISGRLGEMPADSGYPAYLGARLAAFYERAGRASCIGSPGREGTVTVVGAVSPPGGDFSDPVTAATLSIVQVFWGLDKKLAQRKHFPSLNWLISYTKYMRVLEPFFNSYDDNYSELRTRCRDILQQEDSLSEIVQLVGRDSLSEDQKV 810
            F SV GGTCAVPGAFGCGKTVISQS+SKFSNSDA++YVGCGERGNEMAEVL +FPELT  + GKEVGIMKRT LVANTSNMPVAAREASIYTGITLAEYFRDMGMNVSMMADSTSRWAEALREISGRLGEMPADSGYPAYLGARLAAFYERAGRA C+GSP REGTVTV+GAVSPPGGDFSDPVTAATLSIVQVFWGLDKKLAQRKHFPSLNWLISYTKYMRVLEPFFN +D +Y   R R R+ILQQEDSLSEIVQLVG++SLSEDQKV
Sbjct:  240 FPSVLGGTCAVPGAFGCGKTVISQSISKFSNSDAVIYVGCGERGNEMAEVLCDFPELTTTIDGKEVGIMKRTALVANTSNMPVAAREASIYTGITLAEYFRDMGMNVSMMADSTSRWAEALREISGRLGEMPADSGYPAYLGARLAAFYERAGRAECLGSPRREGTVTVIGAVSPPGGDFSDPVTAATLSIVQVFWGLDKKLAQRKHFPSLNWLISYTKYMRVLEPFFNDFDASYGATRNRAREILQQEDSLSEIVQLVGKESLSEDQKV 509
[Close]
BLAST of mRNA_Ecto-sp9_F_contig10680.608.1 vs.
Match: H(+)-transporting (two-sector ATPase n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2V294_9STRA)

HSP 1 Score: 476 bits (1225), Expect = 1.450e-163
Identity = 241/270 (89.26%), Postives = 253/270 (93.70%), Query Frame = 1 
Query:    1 FSSVQGGTCAVPGAFGCGKTVISQSLSKFSNSDAIVYVGCGERGNEMAEVLNEFPELTIDVKGKEVGIMKRTTLVANTSNMPVAAREASIYTGITLAEYFRDMGMNVSMMADSTSRWAEALREISGRLGEMPADSGYPAYLGARLAAFYERAGRASCIGSPGREGTVTVVGAVSPPGGDFSDPVTAATLSIVQVFWGLDKKLAQRKHFPSLNWLISYTKYMRVLEPFFNSYDDNYSELRTRCRDILQQEDSLSEIVQLVGRDSLSEDQKV 810
            F SV GGTCAVPGAFGCGKTVISQSLSKFSNSD IVYVGCGERGNEMAEVL +FPELT  V GKEVGIM RTTLVANTSNMPVAAREASIYTGITLAEYFRD GMNVSMMADSTSRWAEALREISGRLGEMPADSGYPAYLGARLAAFYERAGR  C+GSP REGTVTVVGAVSPPGGDFSDPVTAATLSIVQVFWGLDKKLAQRKHFPS+NWLISYTKYMRVL+P+FN+ D  YS+LR +CR+ILQ ED+LSEIVQLVG++SLSEDQKV
Sbjct:  243 FPSVLGGTCAVPGAFGCGKTVISQSLSKFSNSDCIVYVGCGERGNEMAEVLCDFPELTTTVNGKEVGIMNRTTLVANTSNMPVAAREASIYTGITLAEYFRDQGMNVSMMADSTSRWAEALREISGRLGEMPADSGYPAYLGARLAAFYERAGRVECLGSPAREGTVTVVGAVSPPGGDFSDPVTAATLSIVQVFWGLDKKLAQRKHFPSINWLISYTKYMRVLDPYFNNLDPQYSKLRNQCREILQMEDNLSEIVQLVGKESLSEDQKV 512
[Close]
BLAST of mRNA_Ecto-sp9_F_contig10680.608.1 vs.
Match: H(+)-transporting (two-sector ATPase n=17 Tax=Oomycota TaxID=4762 RepID=A0A397DSA3_9STRA)

HSP 1 Score: 471 bits (1213), Expect = 1.800e-162
Identity = 239/270 (88.52%), Postives = 255/270 (94.44%), Query Frame = 1 
Query:    1 FSSVQGGTCAVPGAFGCGKTVISQSLSKFSNSDAIVYVGCGERGNEMAEVLNEFPELTIDVKGKEVGIMKRTTLVANTSNMPVAAREASIYTGITLAEYFRDMGMNVSMMADSTSRWAEALREISGRLGEMPADSGYPAYLGARLAAFYERAGRASCIGSPGREGTVTVVGAVSPPGGDFSDPVTAATLSIVQVFWGLDKKLAQRKHFPSLNWLISYTKYMRVLEPFFNSYDDNYSELRTRCRDILQQEDSLSEIVQLVGRDSLSEDQKV 810
            F SV GGTCAVPGAFGCGKTVISQ+LSK SNSDAIVYVGCGERGNEMAEVL +FPELT+ + G+EV IMKRTTLVANTSNMPVAAREASIYTGITLAEYFRD GMNVSMMADSTSRWAEALREISGRLGEMPADSGYPAYLGARLAAFYERAGR SC+GSP REG+VTVVGAVSPPGGDFSDPVTAATLSIVQVFWGLDKKLAQRKHFPS+NWLISYTKYMRVLEPFFN  D +YS LRT+C++ILQ+ED+L EIVQLVG++SLSEDQKV
Sbjct:  192 FPSVLGGTCAVPGAFGCGKTVISQALSKHSNSDAIVYVGCGERGNEMAEVLCDFPELTMTINGQEVPIMKRTTLVANTSNMPVAAREASIYTGITLAEYFRDQGMNVSMMADSTSRWAEALREISGRLGEMPADSGYPAYLGARLAAFYERAGRVSCLGSPKREGSVTVVGAVSPPGGDFSDPVTAATLSIVQVFWGLDKKLAQRKHFPSVNWLISYTKYMRVLEPFFNRLDPDYSNLRTKCQEILQKEDNLQEIVQLVGKESLSEDQKV 461
[Close]
BLAST of mRNA_Ecto-sp9_F_contig10680.608.1 vs.
Match: H(+)-transporting (two-sector ATPase n=2 Tax=Aphanomyces astaci TaxID=112090 RepID=A0A396ZWF9_9STRA)

HSP 1 Score: 471 bits (1213), Expect = 4.740e-162
Identity = 239/270 (88.52%), Postives = 255/270 (94.44%), Query Frame = 1 
Query:    1 FSSVQGGTCAVPGAFGCGKTVISQSLSKFSNSDAIVYVGCGERGNEMAEVLNEFPELTIDVKGKEVGIMKRTTLVANTSNMPVAAREASIYTGITLAEYFRDMGMNVSMMADSTSRWAEALREISGRLGEMPADSGYPAYLGARLAAFYERAGRASCIGSPGREGTVTVVGAVSPPGGDFSDPVTAATLSIVQVFWGLDKKLAQRKHFPSLNWLISYTKYMRVLEPFFNSYDDNYSELRTRCRDILQQEDSLSEIVQLVGRDSLSEDQKV 810
            F SV GGTCAVPGAFGCGKTVISQ+LSK SNSDAIVYVGCGERGNEMAEVL +FPELT+ + G+EV IMKRTTLVANTSNMPVAAREASIYTGITLAEYFRD GMNVSMMADSTSRWAEALREISGRLGEMPADSGYPAYLGARLAAFYERAGR SC+GSP REG+VTVVGAVSPPGGDFSDPVTAATLSIVQVFWGLDKKLAQRKHFPS+NWLISYTKYMRVLEPFFN  D +YS LRT+C++ILQ+ED+L EIVQLVG++SLSEDQKV
Sbjct:  192 FPSVLGGTCAVPGAFGCGKTVISQALSKHSNSDAIVYVGCGERGNEMAEVLCDFPELTMTINGQEVPIMKRTTLVANTSNMPVAAREASIYTGITLAEYFRDQGMNVSMMADSTSRWAEALREISGRLGEMPADSGYPAYLGARLAAFYERAGRVSCLGSPKREGSVTVVGAVSPPGGDFSDPVTAATLSIVQVFWGLDKKLAQRKHFPSVNWLISYTKYMRVLEPFFNRLDPDYSNLRTKCQEILQKEDNLQEIVQLVGKESLSEDQKV 461
[Close]
BLAST of mRNA_Ecto-sp9_F_contig10680.608.1 vs.
Match: H(+)-transporting (two-sector ATPase n=25 Tax=Oomycota TaxID=4762 RepID=H3GB02_PHYRM)

HSP 1 Score: 472 bits (1214), Expect = 6.120e-162
Identity = 239/270 (88.52%), Postives = 255/270 (94.44%), Query Frame = 1 
Query:    1 FSSVQGGTCAVPGAFGCGKTVISQSLSKFSNSDAIVYVGCGERGNEMAEVLNEFPELTIDVKGKEVGIMKRTTLVANTSNMPVAAREASIYTGITLAEYFRDMGMNVSMMADSTSRWAEALREISGRLGEMPADSGYPAYLGARLAAFYERAGRASCIGSPGREGTVTVVGAVSPPGGDFSDPVTAATLSIVQVFWGLDKKLAQRKHFPSLNWLISYTKYMRVLEPFFNSYDDNYSELRTRCRDILQQEDSLSEIVQLVGRDSLSEDQKV 810
            F SV GGTCAVPGAFGCGKTVISQ+LSK SNSDAIVYVGCGERGNEMAEVLN+FPELT+ V  +EV IMKRTTLVANTSNMPVAAREASIYTGITLAEYFRD GMNVSMMADSTSRWAEALREISGRLGEMPADSGYPAYLGARLAAFYERAGR +C+GSP REG+VTVVGAVSPPGGDFSDPVTAATLSIVQVFWGLDKKLAQRKHFPS+NWLISYTKYMRVLEPFFN  D  YS LRT+C++ILQ+ED+L+EIVQLVG++SLSEDQKV
Sbjct:  241 FPSVLGGTCAVPGAFGCGKTVISQALSKHSNSDAIVYVGCGERGNEMAEVLNDFPELTMTVNDREVPIMKRTTLVANTSNMPVAAREASIYTGITLAEYFRDQGMNVSMMADSTSRWAEALREISGRLGEMPADSGYPAYLGARLAAFYERAGRVACLGSPKREGSVTVVGAVSPPGGDFSDPVTAATLSIVQVFWGLDKKLAQRKHFPSVNWLISYTKYMRVLEPFFNKIDPEYSTLRTKCQEILQKEDNLTEIVQLVGKESLSEDQKV 510
[Close]
BLAST of mRNA_Ecto-sp9_F_contig10680.608.1 vs.
Match: H(+)-transporting (two-sector ATPase n=1 Tax=Hyaloperonospora arabidopsidis (strain Emoy2) TaxID=559515 RepID=M4BE37_HYAAE)

HSP 1 Score: 472 bits (1214), Expect = 6.120e-162
Identity = 238/270 (88.15%), Postives = 255/270 (94.44%), Query Frame = 1 
Query:    1 FSSVQGGTCAVPGAFGCGKTVISQSLSKFSNSDAIVYVGCGERGNEMAEVLNEFPELTIDVKGKEVGIMKRTTLVANTSNMPVAAREASIYTGITLAEYFRDMGMNVSMMADSTSRWAEALREISGRLGEMPADSGYPAYLGARLAAFYERAGRASCIGSPGREGTVTVVGAVSPPGGDFSDPVTAATLSIVQVFWGLDKKLAQRKHFPSLNWLISYTKYMRVLEPFFNSYDDNYSELRTRCRDILQQEDSLSEIVQLVGRDSLSEDQKV 810
            F SV GGTCAVPGAFGCGKTVISQ+LSK SNSDAIVYVGCGERGNEMAEVLN+FPELT+ +  +EV IMKRTTLVANTSNMPVAAREASIYTGITLAEYFRD GMNVSMMADSTSRWAEALREISGRLGEMPADSGYPAYLGARLAAFYERAGR +C+GSP REG+VTVVGAVSPPGGDFSDPVTAATLSIVQVFWGLDKKLAQRKHFPS+NWLISYTKYMRVLEPFFN  D  YS LRT+C++ILQ+ED+L+EIVQLVG++SLSEDQKV
Sbjct:  241 FPSVLGGTCAVPGAFGCGKTVISQALSKHSNSDAIVYVGCGERGNEMAEVLNDFPELTMTINDREVPIMKRTTLVANTSNMPVAAREASIYTGITLAEYFRDQGMNVSMMADSTSRWAEALREISGRLGEMPADSGYPAYLGARLAAFYERAGRVACLGSPTREGSVTVVGAVSPPGGDFSDPVTAATLSIVQVFWGLDKKLAQRKHFPSVNWLISYTKYMRVLEPFFNKIDPEYSSLRTKCQEILQKEDNLTEIVQLVGKESLSEDQKV 510
[Close]
BLAST of mRNA_Ecto-sp9_F_contig10680.608.1 vs.
Match: H(+)-transporting (two-sector ATPase n=3 Tax=Phaeodactylum tricornutum TaxID=2850 RepID=B7G162_PHATC)

HSP 1 Score: 471 bits (1212), Expect = 1.440e-161
Identity = 244/275 (88.73%), Postives = 256/275 (93.09%), Query Frame = 1 
Query:    1 FSSVQGGTCAVPGAFGCGKTVISQSLSKFSNSDAIVYVGCGERGNEMAEVLNEFPELTI-----DVKGKEVGIMKRTTLVANTSNMPVAAREASIYTGITLAEYFRDMGMNVSMMADSTSRWAEALREISGRLGEMPADSGYPAYLGARLAAFYERAGRASCIGSPGREGTVTVVGAVSPPGGDFSDPVTAATLSIVQVFWGLDKKLAQRKHFPSLNWLISYTKYMRVLEPFFNSYDDNYSELRTRCRDILQQEDSLSEIVQLVGRDSLSEDQKV 810
            F SV GGTCAVPGAFGCGKTVISQSLSKFSNSDAIVYVGCGERGNEMAEVL +FPELT+     D   +EVGIMKRTTLVANTSNMPVAAREASIYTGITLAEYFRD GMNVSMMADSTSRWAEALREISGRLGEMPADSGYPAYLGARLAAFYERAGR SC+GSP REGTVTVVGAVSPPGGDFSDPVTAATLSIVQVFWGLDKKLAQRKHFPSLNWLISYTKYM+VLEP+FN+ DD YS LR + R+ILQQED+LSEIVQLVG++SLSEDQKV
Sbjct:  239 FPSVLGGTCAVPGAFGCGKTVISQSLSKFSNSDAIVYVGCGERGNEMAEVLCDFPELTLTRKDEDGSEREVGIMKRTTLVANTSNMPVAAREASIYTGITLAEYFRDQGMNVSMMADSTSRWAEALREISGRLGEMPADSGYPAYLGARLAAFYERAGRVSCLGSPTREGTVTVVGAVSPPGGDFSDPVTAATLSIVQVFWGLDKKLAQRKHFPSLNWLISYTKYMQVLEPYFNNMDDQYSYLRNQARNILQQEDNLSEIVQLVGKESLSEDQKV 513
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp9_F_contig10680.608.1 vs.
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Ectocarpus species9 EcSCA_722f female vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
H(+)-transporting2.820e-18399.63two-sector ATPase n=4 Tax=Phaeophyceae TaxID=2870 ... [more]
H(+)-transporting5.720e-16891.85two-sector ATPase n=1 Tax=Tribonema minus TaxID=30... [more]
H(+)-transporting3.360e-16689.30two-sector ATPase (Fragment) n=1 Tax=Symbiodinium ... [more]
H(+)-transporting1.150e-16489.63two-sector ATPase n=2 Tax=Pelagomonadales TaxID=54... [more]
H(+)-transporting1.450e-16389.26two-sector ATPase n=1 Tax=Fibrocapsa japonica TaxI... [more]
H(+)-transporting1.800e-16288.52two-sector ATPase n=17 Tax=Oomycota TaxID=4762 Rep... [more]
H(+)-transporting4.740e-16288.52two-sector ATPase n=2 Tax=Aphanomyces astaci TaxID... [more]
H(+)-transporting6.120e-16288.52two-sector ATPase n=25 Tax=Oomycota TaxID=4762 Rep... [more]
H(+)-transporting6.120e-16288.15two-sector ATPase n=1 Tax=Hyaloperonospora arabido... [more]
H(+)-transporting1.440e-16188.73two-sector ATPase n=3 Tax=Phaeodactylum tricornutu... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp9_F_contig10680contigEcto-sp9_F_contig10680:127..4290 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 of Ectocarpus species9 EcSCA_722f female vs UniRef902022-09-19
OGS1.0 of Ectocarpus species9 EcSCA_722f female2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score528.9
Seed ortholog evalue1.4e-147
Seed eggNOG ortholog2880.D8LGA9
Preferred nameVHA-A
KEGG koko:K02145
KEGG TC3.A.2.2
KEGG Pathwayko00190,ko01100,ko04145,ko04150,ko04721,ko04966,ko05110,ko05120,ko05323,map00190,map01100,map04145,map04150,map04721,map04966,map05110,map05120,map05323
KEGG ModuleM00160
GOsGO:0000325,GO:0002020,GO:0003674,GO:0003824,GO:0005215,GO:0005488,GO:0005515,GO:0005575,GO:0005576,GO:0005618,GO:0005622,GO:0005623,GO:0005737,GO:0005773,GO:0005774,GO:0005794,GO:0005886,GO:0005911,GO:0006810,GO:0006811,GO:0006812,GO:0006950,GO:0006970,GO:0006996,GO:0007030,GO:0007275,GO:0008150,GO:0008324,GO:0009506,GO:0009507,GO:0009526,GO:0009536,GO:0009555,GO:0009628,GO:0009651,GO:0009941,GO:0009987,GO:0010256,GO:0012505,GO:0015075,GO:0015077,GO:0015078,GO:0015318,GO:0015399,GO:0015405,GO:0015672,GO:0016020,GO:0016043,GO:0016462,GO:0016787,GO:0016817,GO:0016818,GO:0016887,GO:0017111,GO:0019829,GO:0019899,GO:0022804,GO:0022853,GO:0022857,GO:0022890,GO:0030054,GO:0030312,GO:0031090,GO:0031967,GO:0031975,GO:0032501,GO:0032502,GO:0034220,GO:0036442,GO:0042623,GO:0042625,GO:0042626,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0043492,GO:0044422,GO:0044424,GO:0044434,GO:0044435,GO:0044437,GO:0044444,GO:0044446,GO:0044464,GO:0044769,GO:0046961,GO:0048046,GO:0048229,GO:0048856,GO:0050896,GO:0051179,GO:0051234,GO:0055044,GO:0055085,GO:0071840,GO:0071944,GO:0090662,GO:0098588,GO:0098655,GO:0098660,GO:0098662,GO:0098805,GO:0099131,GO:0099132,GO:1902600
EggNOG free text desc.proton-transporting ATPase activity, rotational mechanism
EggNOG OGsCOG1155@1,KOG1352@2759
EC3.6.3.14
COG Functional cat.C
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko00001,ko00002,ko01000
Hectar predicted targeting categoryother localisation
Ec32 ortholog descriptionATPase, F1 complex alpha/beta subunit, N-terminal domain
Ec32 orthologEc-06_002750.1
Exons6
Model size810
Cds size810
Stop0
Start0
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp9_F_contig10680.608.1prot_Ecto-sp9_F_contig10680.608.1Ectocarpus species9 EcSCA_722f femalepolypeptideEcto-sp9_F_contig10680 127..4290 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622928286.4025798-CDS-Ecto-sp9_F_contig10680:126..2731622928286.4025798-CDS-Ecto-sp9_F_contig10680:126..273Ectocarpus species9 EcSCA_722f femaleCDSEcto-sp9_F_contig10680 127..273 +
1692277821.7503839-CDS-Ecto-sp9_F_contig10680:126..2731692277821.7503839-CDS-Ecto-sp9_F_contig10680:126..273Ectocarpus species9 EcSCA_722f femaleCDSEcto-sp9_F_contig10680 127..273 +
1622928286.4171963-CDS-Ecto-sp9_F_contig10680:1029..11841622928286.4171963-CDS-Ecto-sp9_F_contig10680:1029..1184Ectocarpus species9 EcSCA_722f femaleCDSEcto-sp9_F_contig10680 1030..1184 +
1692277821.772865-CDS-Ecto-sp9_F_contig10680:1029..11841692277821.772865-CDS-Ecto-sp9_F_contig10680:1029..1184Ectocarpus species9 EcSCA_722f femaleCDSEcto-sp9_F_contig10680 1030..1184 +
1622928286.4313016-CDS-Ecto-sp9_F_contig10680:1802..19071622928286.4313016-CDS-Ecto-sp9_F_contig10680:1802..1907Ectocarpus species9 EcSCA_722f femaleCDSEcto-sp9_F_contig10680 1803..1907 +
1692277821.789321-CDS-Ecto-sp9_F_contig10680:1802..19071692277821.789321-CDS-Ecto-sp9_F_contig10680:1802..1907Ectocarpus species9 EcSCA_722f femaleCDSEcto-sp9_F_contig10680 1803..1907 +
1622928286.446158-CDS-Ecto-sp9_F_contig10680:2578..27501622928286.446158-CDS-Ecto-sp9_F_contig10680:2578..2750Ectocarpus species9 EcSCA_722f femaleCDSEcto-sp9_F_contig10680 2579..2750 +
1692277821.8008323-CDS-Ecto-sp9_F_contig10680:2578..27501692277821.8008323-CDS-Ecto-sp9_F_contig10680:2578..2750Ectocarpus species9 EcSCA_722f femaleCDSEcto-sp9_F_contig10680 2579..2750 +
1622928286.4601212-CDS-Ecto-sp9_F_contig10680:3458..35351622928286.4601212-CDS-Ecto-sp9_F_contig10680:3458..3535Ectocarpus species9 EcSCA_722f femaleCDSEcto-sp9_F_contig10680 3459..3535 +
1692277821.8082209-CDS-Ecto-sp9_F_contig10680:3458..35351692277821.8082209-CDS-Ecto-sp9_F_contig10680:3458..3535Ectocarpus species9 EcSCA_722f femaleCDSEcto-sp9_F_contig10680 3459..3535 +
1622928286.4750116-CDS-Ecto-sp9_F_contig10680:4136..42901622928286.4750116-CDS-Ecto-sp9_F_contig10680:4136..4290Ectocarpus species9 EcSCA_722f femaleCDSEcto-sp9_F_contig10680 4137..4290 +
1692277821.8162425-CDS-Ecto-sp9_F_contig10680:4136..42901692277821.8162425-CDS-Ecto-sp9_F_contig10680:4136..4290Ectocarpus species9 EcSCA_722f femaleCDSEcto-sp9_F_contig10680 4137..4290 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_Ecto-sp9_F_contig10680.608.1

>prot_Ecto-sp9_F_contig10680.608.1 ID=prot_Ecto-sp9_F_contig10680.608.1|Name=mRNA_Ecto-sp9_F_contig10680.608.1|organism=Ectocarpus species9 EcSCA_722f female|type=polypeptide|length=270bp
FSSVQGGTCAVPGAFGCGKTVISQSLSKFSNSDAIVYVGCGERGNEMAEV
LNEFPELTIDVKGKEVGIMKRTTLVANTSNMPVAAREASIYTGITLAEYF
RDMGMNVSMMADSTSRWAEALREISGRLGEMPADSGYPAYLGARLAAFYE
RAGRASCIGSPGREGTVTVVGAVSPPGGDFSDPVTAATLSIVQVFWGLDK
KLAQRKHFPSLNWLISYTKYMRVLEPFFNSYDDNYSELRTRCRDILQQED
SLSEIVQLVGRDSLSEDQKV
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mRNA from alignment at Ecto-sp9_F_contig10680:127..4290+

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_Ecto-sp9_F_contig10680.608.1 ID=mRNA_Ecto-sp9_F_contig10680.608.1|Name=mRNA_Ecto-sp9_F_contig10680.608.1|organism=Ectocarpus species9 EcSCA_722f female|type=mRNA|length=4164bp|location=Sequence derived from alignment at Ecto-sp9_F_contig10680:127..4290+ (Ectocarpus species9 EcSCA_722f female)
TTCAGCTCCGTGCAGGGTGGTACCTGTGCCGTGCCCGGTGCCTTCGGGTG
CGGGAAGACGGTTATCTCCCAGTCGCTCTCCAAGTTCTCCAACTCCGACG
CCATCGTCTACGTCGGTTGCGGCGAGCGCGGAAACGAGATGGCGGAGGTA
CGTGTGTGCGCGTGCCGCAGCGTGTTGCCGTCGCTGCGAGAAAAAGCCGC
ACGCTTTGTTGTGATGCCCGGTTTAAGAGTATTCTAAAACCTACGTAACG
CGTTTGAAACGTCGTGTGCATGGACGCTTGTTTTATACGGAGTAGTGGCT
GCTGATGTGTGTCCGCAGAGAGAGAGAGGACAATGGAACATAGAACCCGA
GCCTCGGCACAACATTGCTGTATCTCCTCTGGTTTGGCAAGGTCATGTGT
GTGTGTGTGTGCACGCACGAGGAGGAAAAGAGTGTGGGGTAGAGGAGAGG
GGGCGCCGATGTCCGTTAACGCGTGTGGTCGAGACGCGCTTGGTCATGTT
CGTTGCCGCGGGTGATGACTTGCTCTTGCGGGAGCGGGGTCTATGGTTGT
GCGGCGTGATACCATCGTCGCTGAAAGGCGCGGTTGAGCGATGTAAACAG
AACACGCCTCGCAGGAGCTAAGGCGATTGATCGGGCGTTGTCGTCGTCGT
CCCAAGATGTGTCGTTCAGCTTGGAGCTCCTTCTCCCAAGCTCGCTGTTG
AAGCATACTAACTGCCTATTTTAAGAGACTCCCGTGTGCATTTTCTAGGA
TTAGACCCTTCTAGGCGCGTGGGGTTCAAGCAAGCGTCTTCCTGTCGCAC
TTGGCAGCAGCAATGCCTCTATTGCCTGTCCATGTAGACTGTGGTTCCAA
CCTGTAAAAAAAAAACACTGGCGCCTCGTTTGCCGTGTCCGTTTTCTCAA
AAGGTGCTCAACGAGTTCCCCGAGCTGACGATCGACGTCAAGGGCAAGGA
GGTGGGTATCATGAAGCGGACCACCCTAGTGGCCAACACGTCCAACATGC
CCGTGGCCGCCCGTGAGGCCTCCATCTACACCGGCATCACCCTCGCCGAG
TACTTCAGGTGACCTTCAAGAAAAGAGGAGGGAATACCGAAGTACTACTC
TGTTTTTGCACCGCGTACAACCCTTTCCTGTCCCCAAGACGGCGGCCTCT
GTTTCGGCCTTGATGCGCGAAGGGCGAGGCTCCCGCACGGCACTTGAAGC
GGCACGAGCCCGTTTGTCCGTGTCCTTTTTGCGCTCAACTGGCCCTTTGG
CATGCCGCGTGGCTAGGGGAGCGTGGGCAACGGACCCCACTTGTTGCTTT
CACGAAGCGTTTTGTAGAGCCACTTGTTGCTTGTGGTTGTGTCTTGGCGC
GTCCTTTTTTTTTGTCCGACCTTACATTCTTGTTTTTTGGTGTTTGCTTG
CCTCCCCCCCCCTCCCCCGTTGTTGGTTGAAATCGCTCGCCGTGTGTTGT
CGTAGTGTACTCAGTTTCCGTGTTTGCTTGCTCTGTGCATACCCCGTCCT
GCCTCAGTCTGTAGACCATGCCGTCCGTAAAATCGTTTGTGCTGGTGCTT
CCGTCTACAAAATGCTTGCTCTTTTTTTTCGTTCTTGGCGCAAAAATACT
CGCGTCTGAGCCCGTCACCCCGACAACAGCTAACTTCCGGCGTGTCTTCT
AAACCCCCCTCCAAAACGATGTACAGGGACATGGGAATGAACGTGTCGAT
GATGGCGGACTCGACGTCCCGATGGGCCGAGGCGCTGCGAGAGATCTCGG
GGCGTCTGGGAGAGATGCCCGCCGACTCTGGGTGAGAGGAAGCGAAGCGA
GGGTACAGAGCGCAAGTTTACGATCAGAATCGAAACAAGTAGGTGTAGAG
GCGGAGCGGGGGGATCGAGGTCGAGGCATGAGAGACACGGGCATGTAGAG
ATTGGAGGGTGTATCAGGAGGAGCACGTGTGATACCGATGCAGATCACGA
ACGATTATGAAAAAGAGAATGAGGCCGAGAGAAAATTACGTCTTTCGGGC
ACGAGCGATTTTTTTGTTTCGGTGCTGCCTGCGCGCGCGTTGCTTGTCGT
CGTCGTCGTCTCCGTGTCTCGAGAGCGCCTTCCTGCCGTCTTTGTCTTCC
TTCTTTTCGTCGTCCTCCTGTGGCACGGCGCTTGGTTGGCTGTCCTCCGG
AGGCGGGGGGGGAGGGGGGCGACGCAAACCTATACACTCAACCAAATCTA
TACACTCAAGCCTTGTGTAACCCCCGTCACAGGGTCCCAGGTCATGACCT
TTTAGAAGCGTTTCTGGTTTCTGGACGTCTTCTTTCGCTGGCCAACCGGT
TACGTAGCACGGTCGATGTCAACAATACTAGGAACCATATCACGCAACAC
ACATGCGACCCACCCTGCGAAACGAACACCACCTGCCCACCCAAAAGCCC
GACTCGATTCCAAGAACACACGCCTAATTCTGAGCAACGACGGTGCGAAC
AGGTACCCGGCCTACCTGGGTGCCCGCCTGGCGGCGTTCTACGAGCGCGC
CGGCCGCGCGAGCTGCATCGGGTCCCCCGGCAGGGAGGGGACCGTTACCG
TCGTGGGCGCCGTGTCGCCCCCCGGCGGCGATTTCTCCGACCCCGTTACG
GCCGCCACGCTGTCCATCGTCCAGGTGCGTTTGCTCTCTCTCTCGCCTAC
TTGGTCGTTCAGTGTTGTGGTGGCGTTGTACTAGTAAGAAGCAACTTGGG
GGTATCCTTGGTTGGTAGTTGGGGCGCTTAGGACCGCTACCGTTTCGTTT
CGTGGTCGGTAAATGTGGGATTTTCTGTTTTTTTCGGGCTTCGTATGCTG
CAAGTGAGGGTTTTGTCGTGGCGCGACTGCAAGCGCCGCTCTGCTTCTAT
TGCTGATGCCGACTCTGCTGTTTCGTGTTGAATTTAATAAGGACGTGGCG
TGCTTTCAGTGCCTAGTTATATCTGTATTTCCTGTCTCTCCCGATGCACT
CGTTGCGCCTCTGTTTTTTTGCAGTGGCCCGTGTTTTCCTTTTGATGGTT
GCAGTGTCTCGGGCTTGCCCCCCCCCCGGGTTCCCATCAACCTCCTCGAA
GAGTGGCGTGTGTCGAAATCTATCCAGATATTTTATTATCCGTATACAAC
AGATTTCCAAATACCAGCTTTGAGGTTCCTCGTACACAGCAGTTACGCGG
TTTGACCACATGGCCTTTGAACGACTCTCGAGAGCATCATGAGTACCCCG
GGCCATCCGTTAGTGGGGGCGCATGCACACGTCCTACCGATTTTTCCCTC
GACCAAGACAACAACTCGTGCTGTTCTACTACAGTCCTCTTACGTATGTA
CCACCCCTTGTGTGCTTATTCTTTTTTGTCAGGTTTTCTGGGGTTTGGAC
AAGAAGCTCGCGCAGAGGAAGCACTTCCCCTCGCTGAACTGGCTCATCTC
CTACACCAAGTAAGCCTTAAACCTTTTGCCTTTTGCACACATGCGTGTTT
ATTTTTATCGCTAGCAGGGAACTCTTGCTGTTTGTGCAACGCTCCTCTCA
GCAAGTAACCGTTGTTCGCGATGAAGTCTTGCATACCGGTCGGTTCCCGA
TTGGCACCCCGTCGGTGCTGGCACAGTGCAGCTTCGAAAGTCGTCTCGCA
GGCGTGCGCAGGGGGGTCACGGGGAATGGGCCGTGAAAATGCGTGGGTGC
GGTGTGGATGATTGCACTGATGCGGCGGAACATGACGAGTGTGTCCGACC
GGGAAATGCCGAGTGTTCGATAACTCATTACCTGGCCCAGTGGGCGCCCC
GGTTGTTTTTTCCGTTCAACGGCTGGCTGATAAAAAAAGGCAATTTTCTC
TTCGATGTGCCGTTTCTGTTCTTGGCATGGACGTAGACTTCTCTTGACGG
ACAGCTGATCTTTCGGGGTCCAACAACAAAGAAAAACGAAGGAAAAGCTC
CCGACCTACGGCTCTCTGTCTCACGCCCCCCCTGACGTCGCCCCTCCCAC
GCCGCGACCGTTTCGCCGAAAACGCCTCTTGGCACTTGTGTGTGTTGCCG
CGAAAAACAGGTACATGCGCGTGCTCGAGCCCTTCTTCAACAGCTACGAC
GACAACTACAGCGAGCTCCGCACGCGGTGCCGCGACATCTTGCAGCAGGA
GGACAGCCTCTCGGAAATCGTGCAGCTCGTCGGACGTGACTCCCTTTCCG
AGGACCAAAAGGTA
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Coding sequence (CDS) from alignment at Ecto-sp9_F_contig10680:127..4290+

>mRNA_Ecto-sp9_F_contig10680.608.1 ID=mRNA_Ecto-sp9_F_contig10680.608.1|Name=mRNA_Ecto-sp9_F_contig10680.608.1|organism=Ectocarpus species9 EcSCA_722f female|type=CDS|length=1620bp|location=Sequence derived from alignment at Ecto-sp9_F_contig10680:127..4290+ (Ectocarpus species9 EcSCA_722f female)
TTCAGCTCCGTGCAGGGTGGTACCTGTGCCGTGCCCGGTGCCTTCGGGTG
CGGGAAGACGGTTATCTCCCAGTCGCTCTCCAAGTTCTCCAACTCCGACG
CCATCGTCTACGTCGGTTGCGGCGAGCGCGGAAACGAGATGGCGGAGTTC
AGCTCCGTGCAGGGTGGTACCTGTGCCGTGCCCGGTGCCTTCGGGTGCGG
GAAGACGGTTATCTCCCAGTCGCTCTCCAAGTTCTCCAACTCCGACGCCA
TCGTCTACGTCGGTTGCGGCGAGCGCGGAAACGAGATGGCGGAGGTGCTC
AACGAGTTCCCCGAGCTGACGATCGACGTCAAGGGCAAGGAGGTGGGTAT
CATGAAGCGGACCACCCTAGTGGCCAACACGTCCAACATGCCCGTGGCCG
CCCGTGAGGCCTCCATCTACACCGGCATCACCCTCGCCGAGTACTTCAGG
TGCTCAACGAGTTCCCCGAGCTGACGATCGACGTCAAGGGCAAGGAGGTG
GGTATCATGAAGCGGACCACCCTAGTGGCCAACACGTCCAACATGCCCGT
GGCCGCCCGTGAGGCCTCCATCTACACCGGCATCACCCTCGCCGAGTACT
TCAGGGACATGGGAATGAACGTGTCGATGATGGCGGACTCGACGTCCCGA
TGGGCCGAGGCGCTGCGAGAGATCTCGGGGCGTCTGGGAGAGATGCCCGC
CGACTCTGGGGACATGGGAATGAACGTGTCGATGATGGCGGACTCGACGT
CCCGATGGGCCGAGGCGCTGCGAGAGATCTCGGGGCGTCTGGGAGAGATG
CCCGCCGACTCTGGGTACCCGGCCTACCTGGGTGCCCGCCTGGCGGCGTT
CTACGAGCGCGCCGGCCGCGCGAGCTGCATCGGGTCCCCCGGCAGGGAGG
GGACCGTTACCGTCGTGGGCGCCGTGTCGCCCCCCGGCGGCGATTTCTCC
GACCCCGTTACGGCCGCCACGCTGTCCATCGTCCAGGTACCCGGCCTACC
TGGGTGCCCGCCTGGCGGCGTTCTACGAGCGCGCCGGCCGCGCGAGCTGC
ATCGGGTCCCCCGGCAGGGAGGGGACCGTTACCGTCGTGGGCGCCGTGTC
GCCCCCCGGCGGCGATTTCTCCGACCCCGTTACGGCCGCCACGCTGTCCA
TCGTCCAGGTTTTCTGGGGTTTGGACAAGAAGCTCGCGCAGAGGAAGCAC
TTCCCCTCGCTGAACTGGCTCATCTCCTACACCAAGTTTTCTGGGGTTTG
GACAAGAAGCTCGCGCAGAGGAAGCACTTCCCCTCGCTGAACTGGCTCAT
CTCCTACACCAAGTACATGCGCGTGCTCGAGCCCTTCTTCAACAGCTACG
ACGACAACTACAGCGAGCTCCGCACGCGGTGCCGCGACATCTTGCAGCAG
GAGGACAGCCTCTCGGAAATCGTGCAGCTCGTCGGACGTGACTCCCTTTC
CGAGGACCAAAAGGTAGTACATGCGCGTGCTCGAGCCCTTCTTCAACAGC
TACGACGACAACTACAGCGAGCTCCGCACGCGGTGCCGCGACATCTTGCA
GCAGGAGGACAGCCTCTCGGAAATCGTGCAGCTCGTCGGACGTGACTCCC
TTTCCGAGGACCAAAAGGTA
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