mRNA_Ecto-sp9_F_contig1068.606.1 (mRNA) Ectocarpus species9 EcSCA_722f female
|
Overview
Homology
BLAST of mRNA_Ecto-sp9_F_contig1068.606.1 vs.
Match: Small (Conductance Mechanosensitive Ion channel n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FX37_ECTSI) HSP 1 Score: 1758 bits (4552), Expect = 0.000e+0 Identity = 966/1050 (92.00%), Postives = 976/1050 (92.95%), Query Frame = 1
Query: 1 RQMSRMDMFSGTKKSGGAGTSSRPGHRKTSSGMGFLLSSAQPHSRVPSRTDDRSPWEAASIAAAAPPPLPRPTGAGVAQTPVAVTSTTAGQQQRGSQVQPDSNVSPGRLERATGGGGGESGVDGCRIASKTPAGVAVAHGVGHSGGAGASRPPPQDDVNYPDTPPPLRRMQRRGSLVNREVPQEDEPKEPIEPELMIGEIQSIRLHEEIALVRRAIVLIMLSLVAAVLVRAFAGELDKDVNIREVVFFVSLLLLSFPVIRFTARLFAFVITTRASGLLYRGNRYYFVVALHYDIAVTIWSVVAMYIWKELFHEWVYTDDSKLARAIFRHVSPVLECHLALRVGILLKNYLVLLVATSYLWRPYLQRVQSSILAQYILLLLTDYCTKGYCNPGDQNFAIEMGRQGIKEGKNISLYAVSKAMGFIPRNKLGHTFFRQLAGSNTLDSSKDATTLGNFLFDQLIVRSRPPPARPXXXXXXXXXXXXXXXXXXXXGSIRMSRGSHGGAGTYRALPRFGGQMQKRNSEPMAVPASPRTPVASPKRFSMFEAGRPQVEGMPLANGGGGGAAAGKVPVAKAVSSKASGTLSKLVPVAGRAALVSSGRGGAGGGTESSDVRGDDAGTTSSANTSPGRSRVRRRKAGTCVDGVDLSIEVASGGETEATGDSGTEWESPEQPVPSMSPSGRDTRIDRARILAQNRSVFTSCSSVASSSNYGDKECGDGVDGEGRQKDQEDRVKGQAARSGETKAEKKEKPKQEEVLVRKTFCPALEPELLDVAFKIFDLDNSGTVTKEEMVLGVVGTFKDHRSLAHTLQDSEHIAQKLGLIIMCVILFILFFVWLSIWGADVVSLSVTFASFLIAFSFMIGTAASNLMSAVLFIFVSRLYDVGDRVHIYSGSNTQGEEPTNVTVVKVDLMTTVFKRWDEQVFYMPNHLLATKTIVNIQRTAHQWHEFMIQVAATTTPEKLTALQTSLQEFSKSKDKPEGLYTRMGFSLVRIEDSTKLTIRITFRQRGNWQNMEKKWACQSMCTWAIKSACDSLNISYFLPEVPVQMKKKSA 3150
+QMSRMDMFSGTKKSGGAGT+SRPGH+K SSGMGFLLSSAQPHSRVPSRTDDRSPWE ASIA AAPPPLPRPTGAGVAQTPVAVTSTTAG+QQRG+QVQPD NVSPGRLERATGGGGGE GVDGCR ASKTPAGVAV HGVGHSGGAGASRPPPQDDVNYPDTPPPLRRMQRRGSLVNREVPQEDEPKEPIEPELMIGEIQSIRLHEEIALVRRAIVLIMLSLVAAVLVRAFAGE YYFVVALHYDIAVTIWSVVAMYIW+ELFH+WVYTDDSKLARAIFRHV+P LECHLALRVGILLKNYLVLLVATSYLWRPYLQRVQSSILAQYILLLLTDYCTKGYCNPGDQNFAIEMGRQGIKEGKNISLYAVSKAMGFIPRNKLGHTFFRQLAGSNTLDSSKDATTLGNFLFDQLI+RSRPPPA XXXXXXXXXXXXXXXXXXXXGSIRMSRGSH GAGTYRALPRFGGQMQKRNSEPMAVPASPRT VASPKRFSMFEAGRPQVEGMPLANGG AGKVPVAKAVSSKAS TLSKLVPVAGRAALVSSGRGGAGGGTESSD R DD GTTSSANTSPGRSRVRRRKAGTCVDGVDLSIEVASGGETEATGD+GTE ESPEQPV S SPSGRDTRIDRARILAQNRSVFTSCSSVASSSNYGDKECGDGVDGEGRQKDQED VKGQAARSGETKAEKKEKPKQEEVLVR TFCPALEPELLDVAFKIFDLDNSGTVTKEEMVLGVVGTFKDHRSLAHTLQDSEHIAQKLGLIIMCVILFILFFVWLSIWGADVVSLSVTFASFLIAFSFMIGTAASNLMSAVLFIFVSRLYDVGDRVHIYSGSNTQGEEPTNVTVVKVDLMTTVFKRWDEQVFYMPNHLLATKTIVNIQRTAHQWHEFMIQVAATTTPEKLTALQTSLQEFSKSKDKPEGLYTRMGFSLVRIEDSTKLTIRITFRQRGNWQNMEKKWACQSMCTWAIKSACDSLNISYFLPEVPVQMKKKSA
Sbjct: 131 KQMSRMDMFSGTKKSGGAGTNSRPGHKKNSSGMGFLLSSAQPHSRVPSRTDDRSPWEVASIATAAPPPLPRPTGAGVAQTPVAVTSTTAGRQQRGNQVQPDGNVSPGRLERATGGGGGEYGVDGCRNASKTPAGVAVTHGVGHSGGAGASRPPPQDDVNYPDTPPPLRRMQRRGSLVNREVPQEDEPKEPIEPELMIGEIQSIRLHEEIALVRRAIVLIMLSLVAAVLVRAFAGEF-----------------------------------------------YYFVVALHYDIAVTIWSVVAMYIWRELFHQWVYTDDSKLARAIFRHVNPALECHLALRVGILLKNYLVLLVATSYLWRPYLQRVQSSILAQYILLLLTDYCTKGYCNPGDQNFAIEMGRQGIKEGKNISLYAVSKAMGFIPRNKLGHTFFRQLAGSNTLDSSKDATTLGNFLFDQLIIRSRPPPAXXXXXXXXXXXXXXXXXXXXXXGSIRMSRGSHAGAGTYRALPRFGGQMQKRNSEPMAVPASPRTTVASPKRFSMFEAGRPQVEGMPLANGGXXXXXAGKVPVAKAVSSKASSTLSKLVPVAGRAALVSSGRGGAGGGTESSDARCDDVGTTSSANTSPGRSRVRRRKAGTCVDGVDLSIEVASGGETEATGDTGTEGESPEQPVASKSPSGRDTRIDRARILAQNRSVFTSCSSVASSSNYGDKECGDGVDGEGRQKDQEDTVKGQAARSGETKAEKKEKPKQEEVLVRTTFCPALEPELLDVAFKIFDLDNSGTVTKEEMVLGVVGTFKDHRSLAHTLQDSEHIAQKLGLIIMCVILFILFFVWLSIWGADVVSLSVTFASFLIAFSFMIGTAASNLMSAVLFIFVSRLYDVGDRVHIYSGSNTQGEEPTNVTVVKVDLMTTVFKRWDEQVFYMPNHLLATKTIVNIQRTAHQWHEFMIQVAATTTPEKLTALQTSLQEFSKSKDKPEGLYTRMGFSLVRIEDSTKLTIRITFRQRGNWQNMEKKWACQSMCTWAIKSACDSLNISYFLPEVPVQMKKKSA 1133
BLAST of mRNA_Ecto-sp9_F_contig1068.606.1 vs.
Match: EF-hand (domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JDS1_9PHAE) HSP 1 Score: 1666 bits (4315), Expect = 0.000e+0 Identity = 910/1059 (85.93%), Postives = 936/1059 (88.39%), Query Frame = 1
Query: 1 RQMSRMDMFSGTKKSGGAGTSSRPGHRKTSSGMGFLLSSAQPHSRVPSRTDDRSPWEAASIAAAAPPPLPRPTGAGVAQTPVAVTSTTAGQQQRGSQVQPDSNVSPGRLERATGGGGGESGVDGCRIASKTPAGVAVAHGVGHSGGAGASRPPPQDDVNYPDTPPPLRRMQRRGSLVNREVPQEDEPKEPIEPELMIGEIQSIRLHEEIALVRRAIVLIMLSLVAAVLVRAFAGELDKDVNIREVVFFVSLLLLSFPVIRFTARLFAFVITTRASGLLYRGNRYYFVVALHYDIAVTIWSVVAMYIWKELFHEWVYTDDSKLARAIFRHVSPVLECHLALRVGILLKNYLVLLVATSYLWRPYLQRVQSSILAQYILLLLTDYCTKGYCNPGDQNFAIEMGRQGIKEGKNISLYAVSKAMGFIPRNKLGHTFFRQLAGSNTLDSSKDATTLGNFLFDQLIVRSRPPPARPXXXXXXXXXXXXXXXXXXXXGSIRMSRGSHGGAGTYRALPRFGGQMQKRNSEPMAVPASPRTPVASPKRFSMFEAGRPQVEGMPLANGGGGGAAAGKVPVAKAVSSKASGTLSKLVPVAGRAALVSSGRGGAGGGTESSDVRGDDAGTTSSANTSPGRSRVRRRKAGTCVDGVDLSIEVASGGETEATGDSGTEWESPEQPVPSMSPSGRDTRIDRARILAQNRSVFTSCSSVASSSNYGDKECGDGVDGEGRQKDQEDRVKGQAARSGETKAEKKEKPKQEEVLVRKTFCPALEPELLDVAFKIFDLDNSGTVTKEEMVLGVVGTFKDHRSLAHTLQDSEHIAQKLGLIIMCVILFILFFVWLSIWGADVVSLSVTFASFLIAFSFMIGTAASNLMSAVLFIFVSRLYDVGDRVHIYSGSNTQGEEPTNVTVVKVDLMTTVFKRWDEQVFYMPNHLLATKTIVNIQRTAHQWHEFMIQVAATTTPEKLTALQTSLQEFSKSKDKPEGLYTRMGFSLVRIEDSTKLTIRITFRQRGNWQ---------NMEKKWACQSMCTWAIKSACDSLNISYFLPEVPVQMKKKSA 3150
+QMSRMDMFSGTKKSGGAGT+S PGHRKTSSGMGFLLSSAQPHSRVPSRTDDRSPWEAAS+AA APPPLPRPTGAGVAQTPVA TST AGQQ+RGSQ QP SN+S GRLERATGGGGG SGVDGCRIASKTPAGVAVAHGVGHS GAG S+PPPQ DVNYPDTPPPLRRMQRRGSLVNREVP ED+ KEPIEPELMIGEIQSIRLHEEIALVRRAIVLIMLSLVAAVLVR FAGELDKDVNIREVVFFVSLLLLSFPVIRFTARLFAFVITTRASGLLYRGNRYYFVVALHYDIAVTIWSVVA YIWKELFHEWVYTDDSK+AR IFRHVSPVLECHLALRVGILLKNYLVLLVATSYLWRPYLQRVQSSILAQYILLLLTDYCTKGYCNPGDQNFAIEMGRQGIKEGKNISLYAVSKAMGFIPRNKLGHTFFRQLAGSNTLDSSKDATTLGNFLFDQLI+RSRPPPARP GSIRMSRGSHG GTYRALPRFGGQMQKRNSE MAVPASPRTPVASPKRFS F+AGRPQVEGMPLA GGGGGAAAGKVPVAKAVSSKAS TLSKLVPVAGRA+L+SSGRG A GGTESSDV G DAGTTSSANTSPGRSR RRR+A TCV+GV LSI SGGE EATG++GTE ESPEQPV S SPSGRDTRIDRAR+LAQNR+VF+SCSSVA+SSNYGDKECGDGVDGEGRQ+DQE T+AEKKEKPKQEEVLVRKTFCPALEPELLDVAFKIFDLDNSGT+TKEEMVLGVVGTFKDHRSLAHTLQDSEHIAQKLGLIIMCVILFILFFVWLSIWGADVVSLSVTFASFLIAFSFMIGTAASNLMSAVLFIFVSRLYDVGDRVHIYSGSNT+GEEPTNVTVVKVDLMTTVFKRWDEQ SLQEFSKSKDKPEGLY RMGFSLVRIEDSTKLTIRITFRQRGNWQ NMEKKWACQSMCTWAIKSACDSLNISYFLPE+PVQMK+KSA
Sbjct: 132 KQMSRMDMFSGTKKSGGAGTNSWPGHRKTSSGMGFLLSSAQPHSRVPSRTDDRSPWEAASMAAPAPPPLPRPTGAGVAQTPVAATSTRAGQQRRGSQGQPASNISAGRLERATGGGGGNSGVDGCRIASKTPAGVAVAHGVGHSVGAGDSQPPPQGDVNYPDTPPPLRRMQRRGSLVNREVPPEDDLKEPIEPELMIGEIQSIRLHEEIALVRRAIVLIMLSLVAAVLVREFAGELDKDVNIREVVFFVSLLLLSFPVIRFTARLFAFVITTRASGLLYRGNRYYFVVALHYDIAVTIWSVVARYIWKELFHEWVYTDDSKMARTIFRHVSPVLECHLALRVGILLKNYLVLLVATSYLWRPYLQRVQSSILAQYILLLLTDYCTKGYCNPGDQNFAIEMGRQGIKEGKNISLYAVSKAMGFIPRNKLGHTFFRQLAGSNTLDSSKDATTLGNFLFDQLIIRSRPPPARPTTKTSPPRKSLAAAFTGAGGGSIRMSRGSHGVGGTYRALPRFGGQMQKRNSESMAVPASPRTPVASPKRFSTFDAGRPQVEGMPLAIGGGGGAAAGKVPVAKAVSSKASSTLSKLVPVAGRASLMSSGRGSASGGTESSDVPGGDAGTTSSANTSPGRSRGRRREARTCVNGVGLSIADGSGGEMEATGETGTEGESPEQPVVSTSPSGRDTRIDRARVLAQNRNVFSSCSSVANSSNYGDKECGDGVDGEGRQQDQEXXXXXXXXXXXXTEAEKKEKPKQEEVLVRKTFCPALEPELLDVAFKIFDLDNSGTITKEEMVLGVVGTFKDHRSLAHTLQDSEHIAQKLGLIIMCVILFILFFVWLSIWGADVVSLSVTFASFLIAFSFMIGTAASNLMSAVLFIFVSRLYDVGDRVHIYSGSNTRGEEPTNVTVVKVDLMTTVFKRWDEQ--------------------------------------------ASLQEFSKSKDKPEGLYPRMGFSLVRIEDSTKLTIRITFRQRGNWQVGQEAIVVVNMEKKWACQSMCTWAIKSACDSLNISYFLPEIPVQMKEKSA 1146
BLAST of mRNA_Ecto-sp9_F_contig1068.606.1 vs.
Match: EF-hand (domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JBC1_9PHAE) HSP 1 Score: 818 bits (2113), Expect = 5.090e-270 Identity = 541/1086 (49.82%), Postives = 672/1086 (61.88%), Query Frame = 1
Query: 1 RQMSRMDMFSGTKKSGGAGTSSR---------PGHRKT-SSGMGFLLSSAQPHSRVPSRTDDRSPWEAASIAAAAPPPLPRPTGAGVAQTPVAVTSTTAGQQQRGSQVQPDSNVSPGRLERATGGGGGESGVDGCRIASKTPAGVAVAHGVGHSGGAGASRPPPQDDVNYPDTPPPLRRMQRRGSLVNREVPQEDEPKEPIEPELMIGEIQSIRLHEEIALVRRAIVLIMLSLVAAVLVRAFAGELDKDVNIREVVFFVSLLLLSFPVIRFTARLFAFVITTRASGLLYRGNRYYFVVALHYDIAVTIWSVVAMYIWKELFHEWVYTDDSKLARAIFRHVSPVLECHLALRVGILLKNYLVLLVATSYLWRPYLQRVQSSILAQYILLLLTDYCTKGYCNPGDQNFAIEMGRQGIKEGKNISLYAVSKAMGFIPRNKLGHTFFRQLAGSNTLDSSKDATTLGNFLFDQLIVRSRP------PPARPXXXXXXXXXXXXXXXXXXXXG-----SIRMSRGSHGGAGTYRALPRFGGQMQKRNSEPMAVPASPRTPVASPKRFSMFEAGRPQVEGMPLANGGGGGAAAGKVPVAKAVSSKASGTLSKLVPVAGRAALVSSGRGGAGGGTESSDVRGDDAGTTSSANTSP-------GRSRVRR-----RKAGTCVDGVD--LSIEVASGGETEATGD-SGTEWESPE-QPVPSMSPSGRDTRIDRARILAQNRSVFTSCSSVASSSNYGDKECG-DGVDGEGRQKDQEDRVKGQAARSGETKAEKKEKPKQEEVLVRKTFCPALEPELLDVAFKIFDLDNSGTVTKEEMVLGVVGTFKDHRSLAHTLQDSEHIAQKLGLIIMCVILFILFFVWLSIWGADVVSLSVTFASFLIAFSFMIGTAASNLMSAVLFIFVSRLYDVGDRVHIYSGSNTQGEEPTNVTVVKVDLMTTVFKRWDEQVFYMPNHLLATKTIVNIQRTAHQWHEFMIQVAATTTPEKLTALQTSLQEFSKSKDKPEGLYTRMGFSLVRIEDSTKLTIRITFRQRGNWQNMEKKWACQSMCTWAIKSACDSLNISYFLPEVPVQMKKK 3144
R +S D+FS G GTS R P H+K SS MGFL S PS T+ R P S++AA G + A A R + ++V+P LE GG GVD R + PA A +GH S P D V P TPP L ++R +LV+ +E+ E +LMIGEIQSI++ +EI L R+A++LI+ SLV A L R FAG LDKDVNI VV F S + LS+P+IRFT RLFA+ +TTRAS LLYRGN +Y+VVALH DI++TIWSV +M++W++LF WVY DS+L+ +R+ + +C++A RVG+LLKN+LVLLVATSYLWRPYLQRVQSSILAQYILLLLTDY G CNP DQ FAIEMGR+GIKE + ISLYAVSKAMGFIPR+KLGH FFR+L GSNTL+SS+DA TLG ++FDQL++RSR PPA P S R RG G +LP + P +S T P+ S A P GGG P+ SSK S ++ K+ A S G A +++D DAG++ G +R R ++A + + VD E+ GE++A G SG E E P + V M+P + A+ +A S S + ++ GD G D DG +++ +E V+G + +++ +KP++EE+L R+T CP LE ++L++AF IFD+DN+G++TK EMVLGVV TFKDHRSLAHTL DSEHIA+KLGLII +ILFIL FVWLSI G DV+SLSVTFASFLIAFSFMIGTAASNLM+AVLFIFVSRLYDVGDRVHIY T G EP NV V KVDL TT F+RWDEQ+FY+PNHLLA KTIVNIQRTAHQWHEF I VAATT+ KL L +LQ+F+K KDKPEGLY RMGFSL IEDST+L+IRI FRQRGNWQ+MEKKWACQSMCTWAIK+ACD++ I+Y+LPEVPV MK K
Sbjct: 122 RALSNGDLFS----HGAKGTSGREPSKTTSVGPSHKKNVSSLMGFLWPS-------PSSTEKRPPSGQTSLSAA--------DVGGASPFSGATKDYPASASGREQTLNYQASVNPHHLEE----GGVGGGVDETR---RHPA----AGSMGHVSDR-VSLPNALDGVRIPATPPQLDATEQRPNLVHVRETKEERIDTRSETDLMIGEIQSIQIADEIVLARKALMLILGSLVVATLFREFAGRLDKDVNIVNVVGFASTIFLSYPMIRFTIRLFAYFLTTRASALLYRGNSFYYVVALHQDISMTIWSVASMFVWRQLFAGWVYPTDSELSGKTYRYGDELFQCYVAYRVGMLLKNFLVLLVATSYLWRPYLQRVQSSILAQYILLLLTDYAATGKCNPDDQKFAIEMGRRGIKEQEKISLYAVSKAMGFIPRHKLGHAFFRELGGSNTLNSSRDAKTLGEYMFDQLLLRSRTYSPGCTPPASPSTKRWAYLANVGQTVLGGGSNANTLMSARSFRGGRLGPSNRASLPSSWTASDVGSLSPAKGTSSDATLKPPPRTRSRSGAEERAAGSAPREAGGGS-------PIVTRGSSKLSSSVDKMRMGPNARAASDSAAGAAAVTVDTADA--SDAGSSERPRNEVLPSEGGGGMARFREFHGGGKRALSVIQDVDSFADSELFVAGESKAEGTASGGEMEFPSLRVVDGMAPRHGHDVAELAKEIANGGSFS---SQDRNDNDAGDASRGKDSADGTVQKEHEESIVQGNGSTQKGGSSDEVDKPQEEELLTRETLCPMLEEQVLEMAFTIFDMDNNGSITKAEMVLGVVDTFKDHRSLAHTLHDSEHIARKLGLIIFWLILFILAFVWLSILGFDVLSLSVTFASFLIAFSFMIGTAASNLMTAVLFIFVSRLYDVGDRVHIYDDVQTAGVEPMNVVVTKVDLRTTSFRRWDEQIFYIPNHLLAEKTIVNIQRTAHQWHEFYIHVAATTSSRKLETLHNALQQFAKKKDKPEGLYPRMGFSLTGIEDSTRLSIRIVFRQRGNWQSMEKKWACQSMCTWAIKNACDTIGITYYLPEVPVVMKNK 1164
BLAST of mRNA_Ecto-sp9_F_contig1068.606.1 vs.
Match: Small (Conductance Mechanosensitive Ion channel n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FX36_ECTSI) HSP 1 Score: 574 bits (1480), Expect = 6.030e-179 Identity = 418/985 (42.44%), Postives = 536/985 (54.42%), Query Frame = 1
Query: 310 VSPGRLERATGGGGGESGVDGCRIASKTPAGVAVAHGVGHSGGAGASRPPPQDDVNYPDTPPPLRRMQRRGSLVNREVPQEDEPKEPIEPELMIGEIQSIRLHEEIALVRRAIVLIMLSLVAAVLVRAFAGELDKDVNIREVVFFVSLLLLSFPVIRFTARLFAFVITTRASGLLYRGNRYYFVVALHYDIAVTIWSVVAMYIWKELFHEWVYTDDSKLARAIFRHVSPVLECHLALRVGILLKNYLVLLVATSYLWRPYLQRVQSSILAQYILLLLTDYCTKGYCNPGDQNFAIEMGRQGIKEGKNISLYAVSKAMGFIPRNKLGHTFFRQLAGSNTLDSSKDATTLGNFLFDQLIVRSR------PPPARPXXXXXXXXXXXXXXXXXXXXGSIRMSRGSHGGAGTYRALPRFGGQM--QKRNSEPMAVPASPRTPVASPKRFSMFEAGRPQVEGMPLANGGGGGAAA-------GKVPVAKAVSSKASGTLSKLVPVAGRAALVSSGRGGAGGGTESSDVRGDDAGTTS-------SANTSPGRSRVRR-----RKAGTCVDGVD--LSIEVASGGETEA-TGDSGTEWE-SPEQPVPSMSPSGRDTRIDRARILAQNRSVFTSCSSVASSSNYGDKECGDGVDGEGR-----QKDQEDRVKGQAARSGETK----AEKKEKPKQEEVLVRKTFCPALEPELLDVAFKIFDLDNSGTVTKEEMVLGVVGTFKDHRSLAHTLQDSEHIAQKLGLIIMCVILFILFFVWLSIWGADVVSLSVTFASFLIAFSFMIGTAASNLMSAVLFIFVSRLYDVGDRVHIYSGSNTQGEEPTNVTVVKVDLMTTVFKRWDEQVFYMPNHLLATKTIVNIQRTAHQWHEFMIQVAATTTPEKLTALQTSLQEFSKSKDKPEGLYTRMGFSLVRIEDSTKLTIRITFRQRGNWQNMEKKWACQSMCTWAIKSACDSLNISYFLPEVPVQMKKK 3144
V+P LE GGG + AS+ PA ++ H G S P D V P TPP L + R +LV+ +E+ E ELMIGEI+SI++ +EI L R+A+VLI +SLV A L R FAG +YFVVALH DI++TIWS+ +M++W+ LF EWVY DS+L+ +R+ QSSILAQYILLLLTDY T G CNP DQ FAIEMGR+GIKE + ISLYAVSKAMGFIPR+KLGH FFR+L G+NTL+SS+DA TLG ++FDQL++RSR PA P G + G A T A GG++ KR S P + A ++ KR S +P + +G GG AA G+ P+ VSSK S +++K+ A S G A +++D DAG++ + G + R ++A + ++ D + GGE++A S E E S + V +M+P + A+ A S SS + DK+ G GEG QK+ E+ Q+ +G T+ +++ +KP++EE+L R+T CP LE ++L++AFKIFDL+++G++TK FVWLSI G DV+SLSVTFASFLIAFSFMIGTAASNLMSAVLFIFVSRLYDVGDRVHIY T G EP NV VVKVDL TT F+RWDEQ+FY+PNHLLA KTIVNIQRTAHQWHEF I VAATT+ +KL L +LQ+F+K KDKPEGL+ RMGFSL IEDST+L+IRI FRQRGNWQNM+KKWACQSMCTWAIK+ACD++ I+Y+LPEVP+ MK K
Sbjct: 196 VNPHHLEEGGIGGGVDK-------ASRHPATGSMGHVSGRM-----SLPNALDGVRIPATPPQLNATENRPNLVHVHDTKEERMDTRSETELMIGEIKSIQITDEIVLARKALVLIFVSLVGATLFREFAGPF-----------------------------------------------FYFVVALHQDISMTIWSIASMFVWRRLFAEWVYPTDSELSGNAYRYGDEFF---------------------------------QSSILAQYILLLLTDYATTGECNPDDQKFAIEMGRRGIKEQEKISLYAVSKAMGFIPRHKLGHAFFRELGGTNTLNSSRDAKTLGEYMFDQLLLRSRMYSPGCTAPASPATRRWAYLANV---------GQTVLGGGGGSNANTLNAKSFRGGRLGASKRASLPSSWTAGDVGSLSPSKRTSSDATLKP-APWLRSRSGAGGRAAGSAPREAGGRSPIVTRVSSKLSSSVNKMRMGPNARAASDSAAGAATATVDTADA--SDAGSSEIPMDEVLPSQGGGGMAGFREFHGGGKRALSVIEDADSFADSDPFVGGESKAEVTASCAEMEFSSLRVVDAMAPRYGHDVSELAKETANGGSF--------SSEDRNDKDAGGASRGEGSAGGTVQKEHEESTNVQS--NGSTQKGGDSDEADKPQEEELLTRETLCPMLEHQVLEMAFKIFDLNSNGSITKA-------------------------------------------FVWLSILGFDVLSLSVTFASFLIAFSFMIGTAASNLMSAVLFIFVSRLYDVGDRVHIYDDVQTAGVEPMNVVVVKVDLRTTSFRRWDEQIFYIPNHLLADKTIVNIQRTAHQWHEFYIHVAATTSSQKLETLHDALQKFAKKKDKPEGLHPRMGFSLTGIEDSTRLSIRIIFRQRGNWQNMDKKWACQSMCTWAIKNACDTIGITYYLPEVPIVMKNK 1023
BLAST of mRNA_Ecto-sp9_F_contig1068.606.1 vs.
Match: Mechanosensitive (ion channel-domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YNP7_9STRA) HSP 1 Score: 267 bits (682), Expect = 4.620e-77 Identity = 130/280 (46.43%), Postives = 194/280 (69.29%), Query Frame = 1
Query: 2305 LDVAFKIFDLDNSGTVTKEEMVLGVVGTFKDHRSLAHTLQDSEHIAQKLGLIIMCVILFILFFVWLSIWGADVVSLSVTFASFLIAFSFMIGTAASNLMSAVLFIFVSRLYDVGDRVHIYSGSNTQGEEPTNVTVVKVDLMTTVFKRWDEQVFYMPNHLLATKTIVNIQRTAHQWHEFMIQVAATTTPEKLTALQTSLQEFSKSKDKPEGLYTRMGFSLVRIEDSTKLTIRITFRQRGNWQNMEKKWACQSMCTWAIKSACDSLNISYFLPEVPVQMKKK 3144
++ F +FD D+S +T EE+V GVV +KDH+SLA TLQDS+ +A KLG ++ IL L F+WL I+G D+ +L++TFAS L+ S +IG A++NL ++++FIFV R +DVGDRV + E N V ++DL+ T F+ WDE+V+Y+PNH+LAT+ I+NIQR+ QWHEF IQV A+T +KL L+ EF++ +KP G++ + F+L +E++ +LTIR+ FRQ+GNWQ + +KWA QSMCT I ++C L I+Y P++P+ K+
Sbjct: 1 MEQVFALFDRDDSNDITHEEVVNGVVNIYKDHQSLALTLQDSQRMAHKLGEVLGAGILIALIFIWLRIFGRDIFALTLTFASVLVGVSVLIGPASANLFASIVFIFVQRPFDVGDRVFHWFPDGRG--EMQNAVVTRIDLLITCFRAWDEKVYYLPNHVLATRPIINIQRSGDQWHEFFIQVLASTPSQKLWELKAKCVEFAEKHNKPSGIHPHIQFALTGVENTNRLTIRVCFRQKGNWQILSRKWAVQSMCTNCIVNSCKELGITYTQPQLPLDFNKQ 278
BLAST of mRNA_Ecto-sp9_F_contig1068.606.1 vs.
Match: Mechanosensitive (ion channel-domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z0M4_9STRA) HSP 1 Score: 264 bits (675), Expect = 3.480e-69 Identity = 238/816 (29.17%), Postives = 370/816 (45.34%), Query Frame = 1
Query: 769 PVIRFTARLFAFVITTRASGLLYRGNRYYFVVALHYDIAVTIWSVVAMYIWKELFHEWVYTDDSKLARAIFRHVSPVLECHLALRVGILLKNYLVLLVATSYLWRPYLQRVQSSILAQYILLLLTDYCTKGYCNPGDQNFAIEMGRQGIKEGKNISLYAVSKAMGFIPRNKLGHTFFRQLA-------GSNTLDSSKDATTLGNFLFDQLIVRSRPPPARPXXXXXXXXXXXXXXXXXXXXGSIRMSRGSHGGAGTYRALPRFGGQMQKRNSEPMAVPASPRTPVASPKRFSMFEAGRPQVEGMPLANGGGGGAAAGKVPVAKAVSSKASGTLSKLVPVAGRAALVSSGRGGAGGGTESSDVRGDDAGTTSSANTSPG--RSRVRRRKAGTCVDGVDLSIEVASGGETEATGDSGTEWESPEQP----------------VPSMSPSGRDTRIDRARILAQNRSVFTSCSSVASSSNYGDKECGDGVDGEGRQKDQEDRVKGQAARSGETKAEKKEKPKQEEVLVRKTFCPALEPELLDVAFKIFDLDNSGTVTKEEMVLGVVGTFKDHRSLAHTLQDSEHIAQKLGLIIMCVILFILFFVWLSIWGADVVSLSVTFASFLIAFSFMIGTAASNLMSAVLFIFVSRLYDVGDRVHIYSGSNTQGEEPTNVTVVKVDLMTTVFKRWDEQVFYMPNHLLATKTIVNIQRTAHQWHEFMIQVAATTTPEKLTALQTSLQEFSKSKDKPEGLYTRMGFSLVRIEDSTKLTIRITFRQRGNWQNMEKKWACQSMCTWAIKSACDSLNISYFLPEVPVQMKK 3141
P+ F ARLFA++ T S +L+R N YFVVALH ++ + ++ L EW + + V + C LA V + L+N+ +LL+A+++LW PYL+R QSSI AQY+LL+LT+YC+ G N + A ++ + + K +SLYAV K++ F+ +K+G + F++L G +T+D+S+ A LG +L+ +L +R +P XXXXXXXX S+ HG G+ +Q PL + +S+AS LS SPG RSR + G C+ L + + + + ++P P VP+ P+ Q + TS AE E P E L + FCPA+ L AF +FD + G VTK++++ GVV +KDH++LA TL DS+ + KLG II ++ F++ F+WLSIWG +S+S+TF+SFL++F+FM G+ A+ L+ +++F+FV+ YDVGDR+ I T VVK++L+TTVF+R D Q MPN LL+ ++N+QR+ + W EF++ V+ATT KL +L+ +Q+F+ G+Y ++GF+ I+DS KL +RI + R NW +++++W + AI C L I+ F P V M K
Sbjct: 254 PLFNFLARLFAYLSITSTSRILFRFNALYFVVALHQELTNIL-------VFGLLLAEWEQWIQPLVIDKAYSAVHNTILCLLAAAVAVFLRNFTLLLIASTHLWLPYLERTQSSIFAQYVLLILTEYCSTGIINAEFEALASQIAAKTARWSK-LSLYAVYKSVSFVQHHKVGGSVFKELGLNAEGDGGEDTIDNSRQARALGEYLYKRLGDAARAGTWQPPYKPXXXXXXXXPRRAYLPIQSLL-----HGHLGSKSTTACHHTSLQXXXXXXXXXXXXXXXXXXXXXXXXXXXX---XXXXXPL----------------RRTASEASLALS-----------------------------------------SPGSPRSRAGTKDDGPCLSPPPLLAQPLPLPLXPSVTAAPLQPQAPPPPSPILHGLLASLRRNSNVPAPQPAXXXXXXXXXXXXKQEGTPPTSPXXXXXXXXXXXXXXXXXX-------------------XXXMAAENAELPNIE--LAK--FCPAMSTTLRPHAFALFDKEQHGVVTKDDLLQGVVSIYKDHKNLARTLADSQQMVNKLGQIIGALMSFVMIFIWLSIWGYQFLSISITFSSFLLSFTFMFGSTATALVESIIFVFVTSAYDVGDRLMIPDIMQTSRYH--GCKVVKINLLTTVFERGDGQSLIMPNKLLSQMALINLQRSGNMWFEFVVGVSATTPLHKLHSLKGRMQKFANEDS--SGIYHKIGFTFTEIQDSAKLVVRINVQGRFNWGDVKRRWEVHNATCQAIAHHCAELGIT-FTPPVQHHMVK 968
BLAST of mRNA_Ecto-sp9_F_contig1068.606.1 vs.
Match: Mechanosensitive (ion channel-domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YNU8_9STRA) HSP 1 Score: 203 bits (517), Expect = 4.510e-49 Identity = 255/925 (27.57%), Postives = 396/925 (42.81%), Query Frame = 1
Query: 520 GSLVNREVPQEDEPKEPIEPELMI----GEIQSIRLHEEIALVRRAIVLIMLSLVAAVLVRAFAGELDKDVNIREVVFFV-----SLLLLSFPVIRFTARLFAFVITTRASGLLYRGNRYYFVVALHYDIAVTIWSVVAMYIWKELFHEWVYTDDSKLARAIFRHVSPVLECHLALRVGILLKNYLVLLVATSYLWRPYLQRVQSSILAQYILLLLTDYCTKGYCNPGDQNFAIEMGRQGIKEGKNISLYAVSKAMGFIPRNKLGHTFFRQLAGSNTLDSSKDATTLGNFLFDQLI-----VRSRPPPARPXXXXXXXXXXXXXXXXXXXXGSIRMSRGSHGGAGTYRALP----RFGGQMQKRNSEPMAVPASPRTPVASPKRFSMFEAGRPQVEGMPLANGGGGGAAAGKVPVAKAVSSKAS------------------------GTLSKLVPVAGRAALVSSGRGGAGGGTESSDVRGDDAGTTSSANTSPGRSRVRRRKAGTCVDGVDLSIEVASGGETEATGDSGTEWESPEQPVPSMSPSGRDT--RIDRARILAQNRSVFTSCSSVASSSNYGDKECGDGVDGEGRQKDQEDRVKGQAARSGETKAEKKEKPKQEEVLVRKTFCPALEPELLDVAFKIFDLDNS----GTVTKEEMVLGVVGTFKDHRSLAHTLQDSEHIAQKLGLIIMCVILFILFFVWLSIWGADVVSLSVTFASFLIAFSFMIGTAASNLMSAVLFIFVSRLYDVGDRVHIYSGSNTQGEEPTNVTVVKVDLMTTVFKRWDEQVFYMPNHLLATKTIVNIQRTAHQWHEFMIQVAATTTPEKLTALQTSLQEFSKSKDKPEGLYT----RMGFSLVRIEDSTKLTIRITFRQRGNWQNMEKKWACQSMCTWAIKSACDSLNISYFLPEVPVQMK 3138
G + E EDEP++ + E + GE+ + L +E R +V +L +A A ++ + +R FV + + S+P FTA ++ + N YF V LHY A +W+V WK E+ + + R V VL C++ R+ LL +L +A Y+WRPYL+RVQ++I AQY++L+LTDY N DQ A++ K +S+YA+S+AMGFIP+NKL H F AGS +DS + A LFD+L+ + PA P XXXXXXXXXX GS +R + G R P R Q R + V A+ A+P S+ EA R + G A A + +S + +L +S A G T S D RG A T G VR A + L+ E D G E + S RDT R++ A + Q R + D + + V R A +++ ++ P + L P + +L + D D + +T+ + +V ++ RSLA TL+D E I KLG +I V FI FV+L I+ +++ L VT+ S ++AFSF+ G++A+N + +FIFV+R YDVGDRV+I N + N V +++++TTVF+RWD+ +PN LA + I N++R+ + V+ T KL AL+ +QE++++ P LY+ + + R+ T + + + Q+G+WQ+ K + + + C L + Y LP V +K
Sbjct: 274 GEAIGLEPDAEDEPEDDEDSENAVFEHLGELPMMTLRKE----ARFLVKYLLIALAIFAPGAIIEKVHGCILVRGQCLFVWASLAGMAVASYP---FTAMAIKTLVMVLCNSRFIHSNHVYFFVRLHYASAQLMWAVFIYLFWKYGLAEY---KSPNMQESTDRAVGRVLACYMVSRIVYLLNKMSLLELANRYMWRPYLERVQANIFAQYVILILTDYSLGYVRNDQDQYIALQFSENQGNWDK-MSMYAISRAMGFIPKNKLRHPVFAGSAGSVAMDSKRSARMFAGLLFDRLVNGPLDLARNDGPA-PATXXXXXXXXXXPKSPPAELGSPPRARDADTTGGVRRRSPSPARRVSSPPQSRGVVEVGVDAA--VLRAAPSLHSVQEAPRQR----------------GNSTTATAAVNASSHXXXXXXXXLXXXXXXXVDRXXXXXXXXXXXXXXXKESLSNSDAKYARGST-SGDRRGSKASTQ-------GTGGVRHWNALKPPERKSLAAEPFQ--------DRGAEIR--DAFTDDAEESHRDTLKRLEAAHLREQMRKRALGLRLETAIEENEDDQAEEAV-----------RPYSVAELKSPDESDDEDDPSPPKTLTLWMLRPVMIKQLAVKTMALLDGDTAVACDAEITRHKFQNAMVTIYQQRRSLALTLKDYESILIKLGYVISLVWSFIALFVFLWIFDQNILGLGVTWVSLVVAFSFLFGSSAANFFESCVFIFVTRAYDVGDRVYIKDELNDEA----NYVVQRINMLTTVFRRWDDHYTILPNQQLAKREIRNMRRSGDGVMLMTLLVSIATPRAKLEALKERMQEYARAVTGP--LYSCDPNSVDYCCRRVISCTNMEVFFVYSQKGSWQDNYLKVKNFHLMSLRLAEVCHELGLEYALPTQGVTLK 1133
BLAST of mRNA_Ecto-sp9_F_contig1068.606.1 vs.
Match: EF-hand (domain-containing protein n=1 Tax=Fonticula alba TaxID=691883 RepID=A0A058ZGC3_FONAL) HSP 1 Score: 149 bits (377), Expect = 2.770e-32 Identity = 105/360 (29.17%), Postives = 182/360 (50.56%), Query Frame = 1
Query: 2263 LVRKTFCPALEPEL-LDVAFKIFDLDNSGTVTKEEMVLGVVGTFKDHRSLAHTLQDSEHIAQKLGLIIMCVILFILFFVWLSIWGADVVSLSVTFASFLIAFSFMIGTAASNLMSAVLFIFVSRLYDVGDRVHIYSGSNTQGEEPTNVTVVKVDLMTTVFKRWDEQVFYMPNHLLATKTIVNIQRTAHQWHEFMIQVAATTTPEKLTALQTSLQEFSKSKDKPEGLYTRMGFSLVRIEDSTKLTIRITFRQRGNWQNMEKKWACQSMCTWAIKSACDSLNISYFLPEVPVQMKKKSA*FHLFAIWCCRVLAPVMTHSPVCVSMLLGMSALPYGGTSFTCCIGERRSKSLPGLFLDKSRWL 3339
L R+ F LEP + D AF +FD+ +SG + + +M + +++ ++L+++L+DS + L + ++L L F +L I+G ++ S V AS +++ SF+ G +A + V+++FV YDVGDRV I + N V ++++ TVF+RWDEQ F++PNH+L K ++NI+R+ +Q H F + + A TT E+L L+ +Q + +S+ PE + F L ++ ++ + IT Q NWQ+ +W ++ +C L I V + A + P H P +S L M+ Y +GE S +LPG+ + SR +
Sbjct: 1996 LTREDFSLFLEPSVNTDEAFALFDIHSSGQIRRRDMKEALQNIYRERKNLSNSLRDSGTMVNTLDRFVSLMLLVCLLFAFLLIFGTNIESTVVPVASLIVSMSFIFGHSAQRMFDNVIYLFVEHPYDVGDRVFI---------DDHNFIVARMNITATVFRRWDEQYFWIPNHILTDKVVINIRRSGNQRHTFYMFLDADTTSEQLGTLRGMMQGWVESQ--PERFARDVDFILFDVDTHGRMQMLITIGQLSNWQDGAVRWKNRTDSWLFFLQSCRELGIKIIPHGQRVDLTGSVAGLGM---------GPSGGH-PSEMSPLNSMTGSTYASPQ-VADMGEVFSSTLPGVSVFGSRQI 2333
BLAST of mRNA_Ecto-sp9_F_contig1068.606.1 vs.
Match: EF-hand (domain-containing protein n=2 Tax=Spizellomyces TaxID=4815 RepID=A0A0L0H4I0_SPIPD) HSP 1 Score: 144 bits (362), Expect = 6.820e-31 Identity = 91/279 (32.62%), Postives = 147/279 (52.69%), Query Frame = 1
Query: 2281 CPALEPELLDVAFKIFDLDNSGTVTKEEMVLGVVGTFKDHRSLAHTLQDSEHIAQKLGLIIMCVILFILFFVWLSIWGADVVSLSVTFASFLIAFSFMIGTAASNLMSAVLFIFVSRLYDVGDRVHIYSGSNTQGEEPTNVTVVKVDLMTTVFKRWDEQVFYMPNHLLATKTIVNIQRTAHQWHEFMIQVAATTTPEKLTALQTSLQEFSKSKDKPEGLYTRMGFSLVRIEDSTKLTIRITFRQRGNWQNMEKKWACQSMCTWAIKSACDSLNISYFLP 3117
C P AF D D +G++T++E+ V+G +++ R L ++D KL V F+ F + L I+G + ++ + F SF++A SF+ GTAA ++LF+F++ YD GDRV I + N+ V +V ++TTVFKR D Q+ Y PN L+A+K I N++R+ Q +Q+ T EKL AL+ + +F KS+ P + IE+ KL + + + +GNWQ+ K+W ++M +A+K L I Y P
Sbjct: 635 CTFSSPTEAADAFAALDQDGNGSITRKEVKEVVIGMYRERRRLFRAMRDLSQALGKLNTFFYFVTSFVTFCIALPIFGISLTAM-LPFTSFILALSFVFGTAARTAFESLLFLFLTHPYDAGDRVVI---------DNQNLLVEEVGVLTTVFKRLDGQLIYAPNTLVASKLIHNLRRSGDQSESIELQLNFDTPEEKLRALKERMIDFVKSE--PREFQGVCDIHISEIENLNKLKVNVILKHKGNWQDGSKRWNRRTMFMFALKKNLLELGIRYATP 901
BLAST of mRNA_Ecto-sp9_F_contig1068.606.1 vs.
Match: EF-hand (domain-containing protein n=1 Tax=Powellomyces hirtus TaxID=109895 RepID=A0A507E7B5_9FUNG) HSP 1 Score: 143 bits (361), Expect = 1.170e-30 Identity = 94/276 (34.06%), Postives = 145/276 (52.54%), Query Frame = 1
Query: 2314 AFKIFDLDNSGTVTKEEMVLGVVGTFKDHRSLAHTLQDSEHIAQKLGLIIMCVILFILFFVWL----SIWGADVVSLSVT----FASFLIAFSFMIGTAASNLMSAVLFIFVSRLYDVGDRVHIYSGSNTQGEEPTNVTVVKVDLMTTVFKRWDEQVFYMPNHLLATKTIVNIQRTAHQWHEFMIQVAATTTPEKLTALQTSLQEFSKSKDKPEGLYTRMGFSLVRIEDSTKLTIRITFRQRGNWQNMEKKWACQSMCTWAIKSACDSLNISYFLP 3117
AF + D D +G++T+ E+ V+G +++ R L ++D KL V F+ F + L +I + +S+T F SF++A SF+ GTAA ++LF+FV+ YD GDRV I S N+ V +V ++TTVFKR D Q+ Y PN L+ATK I N++R+ Q IQ+ TT EKL L+ L ++ KS+ P + IE+ KL + + + +GNWQ+ K+W ++M +A+K L I Y P
Sbjct: 766 AFSVLDQDGNGSITRREVKECVIGMYRERRGLFRAMRDLSQALGKLNTFFFFVDGFVTFCIALPAHHAIISIKIFGISLTAMLPFTSFILALSFVFGTAARTAFESLLFLFVTHPYDAGDRVVIDS---------QNLLVEEVGVLTTVFKRMDGQLIYAPNTLVATKLIHNLRRSGDQSECIEIQLDFTTPEEKLRQLRERLVDYVKSE--PREFVGACDVHIADIENVNKLKLNVILKHKGNWQDGSKRWGRRTMFMYALKHHLTELEIRYLTP 1030 The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp9_F_contig1068.606.1 vs.
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Ectocarpus species9 EcSCA_722f female vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_Ecto-sp9_F_contig1068.606.1 >prot_Ecto-sp9_F_contig1068.606.1 ID=prot_Ecto-sp9_F_contig1068.606.1|Name=mRNA_Ecto-sp9_F_contig1068.606.1|organism=Ectocarpus species9 EcSCA_722f female|type=polypeptide|length=1049bp MSRMDMFSGTKKSGGAGTSSRPGHRKTSSGMGFLLSSAQPHSRVPSRTDDback to top mRNA from alignment at Ecto-sp9_F_contig1068:2171..12986+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_Ecto-sp9_F_contig1068.606.1 ID=mRNA_Ecto-sp9_F_contig1068.606.1|Name=mRNA_Ecto-sp9_F_contig1068.606.1|organism=Ectocarpus species9 EcSCA_722f female|type=mRNA|length=10816bp|location=Sequence derived from alignment at Ecto-sp9_F_contig1068:2171..12986+ (Ectocarpus species9 EcSCA_722f female)back to top Coding sequence (CDS) from alignment at Ecto-sp9_F_contig1068:2171..12986+ >mRNA_Ecto-sp9_F_contig1068.606.1 ID=mRNA_Ecto-sp9_F_contig1068.606.1|Name=mRNA_Ecto-sp9_F_contig1068.606.1|organism=Ectocarpus species9 EcSCA_722f female|type=CDS|length=6294bp|location=Sequence derived from alignment at Ecto-sp9_F_contig1068:2171..12986+ (Ectocarpus species9 EcSCA_722f female)back to top |