mRNA_Ecto-sp9_F_contig10674.604.1 (mRNA) Ectocarpus species9 EcSCA_722f female

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_Ecto-sp9_F_contig10674.604.1
Unique NamemRNA_Ecto-sp9_F_contig10674.604.1
TypemRNA
OrganismEctocarpus species9 EcSCA_722f female (Ectocarpus species9 EcSCA_722f female)
Homology
BLAST of mRNA_Ecto-sp9_F_contig10674.604.1 vs.
Match: Uncharacterized (protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LMN2_ECTSI)

HSP 1 Score: 991 bits (2562), Expect = 0.000e+0
Identity = 564/665 (84.81%), Postives = 571/665 (85.86%), Query Frame = 1
Query:    1 QMYELEDLKMNIKFEIEMLCQKFNVTIADVPMYGRLRTRMTPAKEKNPDFNLSAHRAAARAEAERLREXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAGER-AGAQAGXXXXXXXXXXDQQTVIPNLASYVTINPNLEVFAAQPQLKDVLKRVVPVAVDRAIREIIQPVVERSVTIACITSKELVQKDFAMEADENKMRKAAHLMVSNLAGSLALVTCKEPLRVSIGNHMRSLLSTAAPGADQATTEGLVHLCSSENLELGCMLIEKAATEKAMRDIDEAVAPALQARRKSRETTGQPFYDMSIFNNLRYPGALPESLRPKPGGLRPQQLLVYEAFQRVPRQPAVTRSPAAGPTPLGGGPGGGAGGPSPRLLPSASPASPALSGMQGAXXXXXXXXXXXXGAGMSPQQAVELTLEQALTAWQAAIGRLDMAIGGLLTAHRRAGGGPELTLHAANRDQELSAALQEIVTVGKSVPLSAREDALTKFARAVFNRLFEMARGKEDNPAAVPLLRVEVYAAVLELCLRTVRTSLVSGRNKEDLLTQWYTGLPPQAIIGPGSRKLHLAALKYLVQMNMVDMEKTDAFLARSIVSTFGGSPEEAANKGSQLHQRIQLLQEEWGLYAVALIRQCVFDHPDSNGPEGKVYRVT 1992
            +MYELEDLKMNIKFEIEMLCQKFNVTIADVPMYGRLRTRMTPAKEKNPDFNLSAHRAAARAEAERLRE XXXXXXXXXXXXXXXXXX                              AG + AGA A           ++                       PQLKDVLKRVVPVAVDRAIREIIQPVVERSVTIACITSKELVQKDFAMEADENKMRKAAHLMVSNLAGSLALVTCKEPLRVSIGNHMRSLLSTAAPGADQATTEGLVHLCSSENLELGCMLIEKAATEKAMRDIDEAVAPALQARRKSRETTGQPFYDMSIFNNLRYPGALPESLRPKPGGLRPQQLLVYEAFQRVPRQPAVTRSPAAGPTP GGG      GPSPRLLPS SPASPA+SGM G             GAGMSPQQAVELTLEQALTAWQAAIGRLDMAIGGLLTAHRRAGGGPELTLHAANRDQELSAALQEIVTVGKSVPLSAREDALTKFARAVFNRLFEMARGKEDNPAAVPLLRVEVYAAVLELCLRTVRTSLVSGRNKEDLLTQWYTGLPPQAIIGPGSRKLHLAALKYLVQM MVDME+TDAFLARSIVSTFGGSPEEAANKGSQLHQRIQLLQEEWGLYAVALIRQCVFDHPDSNGPEGK +  T
Sbjct:  196 EMYELEDLKMNIKFEIEMLCQKFNVTIADVPMYGRLRTRMTPAKEKNPDFNLSAHRAAARAEAERLREEXXXXXXXXXXXXXXXXXX------------------------------AGNKIAGASAAGSPEDGTGRGEEM----------------------PQLKDVLKRVVPVAVDRAIREIIQPVVERSVTIACITSKELVQKDFAMEADENKMRKAAHLMVSNLAGSLALVTCKEPLRVSIGNHMRSLLSTAAPGADQATTEGLVHLCSSENLELGCMLIEKAATEKAMRDIDEAVAPALQARRKSRETTGQPFYDMSIFNNLRYPGALPESLRPKPGGLRPQQLLVYEAFQRVPRQPAVTRSPAAGPTPSGGGAXXXXXGPSPRLLPSESPASPAMSGMHGGGAKAVAGGRG--GAGMSPQQAVELTLEQALTAWQAAIGRLDMAIGGLLTAHRRAGGGPELTLHAANRDQELSAALQEIVTVGKSVPLSAREDALTKFARAVFNRLFEMARGKEDNPAAVPLLRVEVYAAVLELCLRTVRTSLVSGRNKEDLLTQWYTGLPPQAIIGPGSRKLHLAALKYLVQMKMVDMERTDAFLARSIVSTFGGSPEEAANKGSQLHQRIQLLQEEWGLYAVALIRQCVFDHPDSNGPEGKSFAKT 806          
BLAST of mRNA_Ecto-sp9_F_contig10674.604.1 vs.
Match: Uncharacterized (protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JXN6_9PHAE)

HSP 1 Score: 990 bits (2559), Expect = 0.000e+0
Identity = 612/664 (92.17%), Postives = 614/664 (92.47%), Query Frame = 1
Query:    1 QMYELEDLKMNIKFEIEMLCQKFNVTIADVPMYGRLRTRMTPAKEKNPDFNLSAHRAAARAEAERLREXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXA--GERAGAQAGXXXXXXXXXXDQQTVIPNLASYVTINPNLEVFAAQPQLKDVLKRVVPVAVDRAIREIIQPVVERSVTIACITSKELVQKDFAMEADENKMRKAAHLMVSNLAGSLALVTCKEPLRVSIGNHMRSLLSTAAPGADQATTEGLVHLCSSENLELGCMLIEKAATEKAMRDIDEAVAPALQARRKSRETTGQPFYDMSIFNNLRYPGALPESLRPKPGGLRPQQLLVYEAFQRVPRQPAVTRSPAAGPTPLGGGPGGGAGGPSPRLLPSASPASPALSGMQGAXXXXXXXXXXXXGAGMSPQQAVELTLEQALTAWQAAIGRLDMAIGGLLTAHRRAGGGPELTLHAANRDQELSAALQEIVTVGKSVPLSAREDALTKFARAVFNRLFEMARGKEDNPAAVPLLRVEVYAAVLELCLRTVRTSLVSGRNKEDLLTQWYTGLPPQAIIGPGSRKLHLAALKYLVQMNMVDMEKTDAFLARSIVSTFGGSPEEAANKGSQLHQRIQLLQEEWGLYAVALIRQCVFDHPDSNGPEGKVYR 1986
            +MYELEDLKMNIKFEIEMLCQKFNVTI DVPMYGRLRTRMTPAKEKNPDFNL+AHRAAARA       XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX    XXXXX XXXXXXX   GERAGAQAGXXXXXXXXX DQQTVIPNLASYVTINPNLEVFAAQPQLKDVLKRVVPVAVDRAIREIIQPVVERSVTIACITSKELVQKDFAMEADENKMRKAAHLMVSNLAGSLALVTCKEPLRVSIGNHMRSLLSTAAPGADQATTEGLVHLCSSENLELGCMLIEKAATEKAMRDIDEAVAPALQARRKSRETTGQPFYDMSIFNNLRYPGALPESLRPKPGGLRPQQLLVYEAFQRVPRQPAVT                     SPRLLPSASPASP        XXXXXXXXXXX   GMSPQQAVELTLEQALTAWQAAIGRLDMAIGGLLTAHRRAGGG ELTLHAANRDQELSAALQEIVTVGKSVPLSAREDALTKFARAVFNRLFEMARGKEDNPAAVPLLRVEVYAAVLELCLRTVRTSLVSGRNKEDLLTQWYTGLPPQAIIGPGSRKLHLAALKYLVQMNMVDMEKTDAFLARSIVSTFGGSPEEAANKGSQLHQRIQLLQEEWGLYAVALIRQCVFDHPDSNGPEGKVYR
Sbjct: 1580 EMYELEDLKMNIKFEIEMLCQKFNVTIGDVPMYGRLRTRMTPAKEKNPDFNLAAHRAAARAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSPEDXXXXXEXXXXXXXXXXGERAGAQAGXXXXXXXXXQDQQTVIPNLASYVTINPNLEVFAAQPQLKDVLKRVVPVAVDRAIREIIQPVVERSVTIACITSKELVQKDFAMEADENKMRKAAHLMVSNLAGSLALVTCKEPLRVSIGNHMRSLLSTAAPGADQATTEGLVHLCSSENLELGCMLIEKAATEKAMRDIDEAVAPALQARRKSRETTGQPFYDMSIFNNLRYPGALPESLRPKPGGLRPQQLLVYEAFQRVPRQPAVTXXXXXXXXXXXXXXXXXXXX-SPRLLPSASPASPXXXXXXXXXXXXXXXXXXX---GMSPQQAVELTLEQALTAWQAAIGRLDMAIGGLLTAHRRAGGGLELTLHAANRDQELSAALQEIVTVGKSVPLSAREDALTKFARAVFNRLFEMARGKEDNPAAVPLLRVEVYAAVLELCLRTVRTSLVSGRNKEDLLTQWYTGLPPQAIIGPGSRKLHLAALKYLVQMNMVDMEKTDAFLARSIVSTFGGSPEEAANKGSQLHQRIQLLQEEWGLYAVALIRQCVFDHPDSNGPEGKVYR 2239          
BLAST of mRNA_Ecto-sp9_F_contig10674.604.1 vs.
Match: CCR4-Not (complex component, Not1-domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZHM2_9STRA)

HSP 1 Score: 473 bits (1218), Expect = 9.350e-144
Identity = 382/711 (53.73%), Postives = 447/711 (62.87%), Query Frame = 1
Query:    1 QMYELEDLKMNIKFEIEMLCQKFNVTIADVPMYGRLRTRMTPAKEKNPDFNLSAHRAAARAEAERLREXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAGERAGAQAGXXXXXXXXXXDQQTVIPNLASYVTINPNLEVFAAQPQLKDVLKRVVPVAVDRAIREIIQPVVERSVTIACITSKELVQKDFAMEADENKMRKAAHLMVSNLAGSLALVTCKEPLRVSIGNHMRSLLSTAAPGADQATTEGLVHLCSSENLELGCMLIEKAATEKAMRDIDEAVAPALQARRKSRETTGQPFYDMSIFNNLRYPGALPESLRPKPGGLRPQQLLVYEAFQRVPRQPAVTRSPAAGPTPLGGGPGGGAGGPSPRLLPSASPASPALSGMQGAXXXXXXXXXXXXGAGMSPQQAV----ELTLEQALTAWQAAIGRLDMAIGGLLTAHRRAGGGPELTLHAANRDQELSAALQEIVTVGKSVPLSAREDALTKFARAVFNRLFEMARGKEDNPAAVPLLRVE----------------------------------------------------------VYAAVLELCLRTVRTSLVSGRNKEDLLTQWYTGLPPQAIIGPGSRKLHLAALKYLVQMNMVDMEKTDAFLARSIVSTFGGSPEEAANKGSQLHQRIQLLQEEWGLYAVALIRQCVFD 1947
            +MY+LEDLKMNIKFE+EML +K N+ + DVP YGRL  R  P K+KNPDFN+    A           XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX          XXXXXXXX   +QTVIPNL++YVTIN NL VFAAQPQLK    RVVPVAVDRAIREIIQPVVERSVTIA IT+KELV KDFA E D+ KMRKAAHLMVSNLAGSLALVTCKEPLRVSIGNHMR LL+ A+P  D  + E +V +CS+ENLELGCMLIEKAATEKAMRDID+ ++ AL ARRK RE +  P+YD ++    RYPGALPE LRPKPGGL+PQQLLVYEAFQR+PR PA                  G  G                      XXXXXXXXXXXX    +P   V    ELT+E AL AWQAA+GRLD+A+  L +    AG   EL+L     D ELSAAL E+V VG+ VP   RE+ALT FA+ VF RLF+MARGKED+ A VPLLRVE                                                          V  AVLELCLR ++        K++++T+WYT   P A++G G RKL  AAL   ++  M+ + + D ++AR++       PE AA   +      +L    W  + ++L+RQCVFD
Sbjct: 1325 EMYDLEDLKMNIKFEVEMLVKKLNIRLEDVPKYGRLARRRPPVKDKNPDFNVRQSAATXXXXX----XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVAAEQTVIPNLSAYVTINANLAVFAAQPQLK----RVVPVAVDRAIREIIQPVVERSVTIAGITTKELVLKDFATEGDDVKMRKAAHLMVSNLAGSLALVTCKEPLRVSIGNHMRQLLAAASPALDAPSVELVVQMCSAENLELGCMLIEKAATEKAMRDIDDGLSAALSARRKHREASAAPYYDAALLTAGRYPGALPEPLRPKPGGLQPQQLLVYEAFQRMPRPPAAR----------------GGAGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRQAPAAGVAVKGELTVEGALAAWQAAMGRLDVALQVLTSQTAGAGHTGELSLVMVGSDAELSAALHEVVVVGQRVPAERREEALTLFAQGVFQRLFDMARGKEDSAADVPLLRVEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRMARXXXXXXXXXXXXXVLVAVLELCLRDLKRF-----PKDEVITRWYTQRAPAAMLGEGERKLQKAALTMFIRAKMLRLAELDVYIARAMAW-----PEAAAAAAAA--PTAELSAVAWSEFGLSLVRQCVFD 1999          
BLAST of mRNA_Ecto-sp9_F_contig10674.604.1 vs.
Match: Hypothetical (protein n=1 Tax=Ditylum brightwellii TaxID=49249 RepID=A0A7S4W626_9STRA)

HSP 1 Score: 355 bits (911), Expect = 5.040e-103
Identity = 256/640 (40.00%), Postives = 332/640 (51.88%), Query Frame = 1
Query:    4 MYELEDLKMNIKFEIEMLCQKFNVTIADVPMY-GRLRTRMTPAKEKNPDFNLSAHRAAARAEAERLREXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAGERAGAQAGXXXXXXXXXXDQQTVIPNLASYVTINPNLEVFAAQ--------PQLKDVLKRVVPVAVDRAIREIIQPVVERSVTIACITSKELVQKDFAMEADENKMRKAAHLMVSNLAGSLALVTCKEPLRVSIGNHMRSLL-----STAAPGA-----------DQATTEGLVHLCSSENLELGCMLIEKAATEKAMRDIDEAVAPALQARRKSRETTGQPFYDMSIFNN--LRYPGALPESLRPKPGGLRPQQLLVYEAFQRVPRQPAVTRSPAAGPTPLGGGPGGGAGGPSPRLLPSASPASPALSGMQGAXXXXXXXXXXXXGAGMSPQQAVELTLEQALTAWQAAIGRLDMAIGGLLTAHRRAGGGPELTLHAANRDQE---LSAALQEIVTVGKSVP----LSARE-DALTKFARAVFNRLFEMARGKEDNPAAVPLLRVEVYAAVLELCLRTVRTSLVSGRNKEDLLTQWYTGLPPQAIIGPGSRKLHLAALKYLVQMNMVDMEKTDAFLARSI 1818
            +Y ++DLKMNIKFE+E+LC+   V + ++P+    L  R+ P KE+NPDFN+ +      + A                                                            +  G           QQTVIPNLA+YVTINP++     Q         +    LKR VP+AVDRAIREIIQPVVERSVTIACIT+KE+V KDFAME+DENKMRKAA LMV+NLAGSLALVTC+EPLR S+  H+R LL     S + PG+           DQ   +  V +C+++NLELGCMLIEKAATEKA+RD+DEA+APAL  R+K RE TGQPFYDMS+F N   RYPGALP+ LRPKPGGLRP+QLLVYEAFQR+PRQP V  S     T                 + ++S A    S   G               G    Q V++    ++       G+LD ++  LL+A       PE+TL     D E   L  A+Q ++    S P    LS  E DA+  FA+ +F  L+E++  +         LR+E   A+LE    T        +  +DL T W T  P +       RKLH   L  LV+ +++   + DAFLARS+
Sbjct: 1042 LYGVDDLKMNIKFEVEVLCKNLGVKLEEIPLRTDDLEKRIFPIKERNPDFNMKSSMMGQPSGAGASSNGQSAPSSISNAAGATTGTGVTVAPLPSVIASPDGKQGSAGVGPVAGAGLPMPATPSNDGTRTASSASQEQQQTVIPNLAAYVTINPSITQLFQQLHGSPFSTEKTATALKRAVPIAVDRAIREIIQPVVERSVTIACITTKEIVTKDFAMESDENKMRKAAQLMVANLAGSLALVTCREPLRASVSTHLRQLLVSSVSSASGPGSNASSNSSLSDQDQNAVDQCVAICATDNLELGCMLIEKAATEKAVRDMDEALAPALNTRKKHREQTGQPFYDMSVFGNGSQRYPGALPDPLRPKPGGLRPEQLLVYEAFQRMPRQPVVPASQQQAST---------------NSVGTSSVAGDTTS-RPGTLPSQSTGGTNTVVKGDGGGQRVDIEALSSIA------GKLDSSVTSLLSASGPRA--PEITLAMLPNDHEVRQLLLAVQRVMPTTSSNPGMITLSTTETDAILGFAQGIFKSLYELSLSEP--------LRLETMVALLETLNETC------SQLGKDLGT-WATYAPTKT---DAQRKLHRTVLLLLVRSHLIPTSELDAFLARSM 1639          
BLAST of mRNA_Ecto-sp9_F_contig10674.604.1 vs.
Match: Hypothetical (protein n=10 Tax=Ditylum brightwellii TaxID=49249 RepID=A0A7S4RY41_9STRA)

HSP 1 Score: 355 bits (911), Expect = 5.910e-103
Identity = 256/640 (40.00%), Postives = 332/640 (51.88%), Query Frame = 1
Query:    4 MYELEDLKMNIKFEIEMLCQKFNVTIADVPMY-GRLRTRMTPAKEKNPDFNLSAHRAAARAEAERLREXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAGERAGAQAGXXXXXXXXXXDQQTVIPNLASYVTINPNLEVFAAQ--------PQLKDVLKRVVPVAVDRAIREIIQPVVERSVTIACITSKELVQKDFAMEADENKMRKAAHLMVSNLAGSLALVTCKEPLRVSIGNHMRSLL-----STAAPGA-----------DQATTEGLVHLCSSENLELGCMLIEKAATEKAMRDIDEAVAPALQARRKSRETTGQPFYDMSIFNN--LRYPGALPESLRPKPGGLRPQQLLVYEAFQRVPRQPAVTRSPAAGPTPLGGGPGGGAGGPSPRLLPSASPASPALSGMQGAXXXXXXXXXXXXGAGMSPQQAVELTLEQALTAWQAAIGRLDMAIGGLLTAHRRAGGGPELTLHAANRDQE---LSAALQEIVTVGKSVP----LSARE-DALTKFARAVFNRLFEMARGKEDNPAAVPLLRVEVYAAVLELCLRTVRTSLVSGRNKEDLLTQWYTGLPPQAIIGPGSRKLHLAALKYLVQMNMVDMEKTDAFLARSI 1818
            +Y ++DLKMNIKFE+E+LC+   V + ++P+    L  R+ P KE+NPDFN+ +      + A                                                            +  G           QQTVIPNLA+YVTINP++     Q         +    LKR VP+AVDRAIREIIQPVVERSVTIACIT+KE+V KDFAME+DENKMRKAA LMV+NLAGSLALVTC+EPLR S+  H+R LL     S + PG+           DQ   +  V +C+++NLELGCMLIEKAATEKA+RD+DEA+APAL  R+K RE TGQPFYDMS+F N   RYPGALP+ LRPKPGGLRP+QLLVYEAFQR+PRQP V  S     T                 + ++S A    S   G               G    Q V++    ++       G+LD ++  LL+A       PE+TL     D E   L  A+Q ++    S P    LS  E DA+  FA+ +F  L+E++  +         LR+E   A+LE    T        +  +DL T W T  P +       RKLH   L  LV+ +++   + DAFLARS+
Sbjct: 1309 LYGVDDLKMNIKFEVEVLCKNLGVKLEEIPLRTDDLEKRIFPIKERNPDFNMKSSMMGQPSGAGASSNGQSAPSSISNAAGATTGTGVTVAPLPSVIASPDGKQGSAGVGPVAGAGLPMPATPSNDGTRTASSASQEQQQTVIPNLAAYVTINPSITQLFQQLHGSPFSTEKTATALKRAVPIAVDRAIREIIQPVVERSVTIACITTKEIVTKDFAMESDENKMRKAAQLMVANLAGSLALVTCREPLRASVSTHLRQLLVSSVSSASGPGSNASSNSSLSDQDQNAVDQCVAICATDNLELGCMLIEKAATEKAVRDMDEALAPALNTRKKHREQTGQPFYDMSVFGNGSQRYPGALPDPLRPKPGGLRPEQLLVYEAFQRMPRQPVVPASQQQAST---------------NSVGTSSVAGDTTS-RPGTLPSQSTGGTNTVVKGDGGGQRVDIEALSSIA------GKLDSSVTSLLSASGPRA--PEITLAMLPNDHEVRQLLLAVQRVMPTTSSNPGMITLSTTETDAILGFAQGIFKSLYELSLSEP--------LRLETMVALLETLNETC------SQLGKDLGT-WATYAPTKT---DAQRKLHRTVLLLLVRSHLIPTSELDAFLARSM 1906          
BLAST of mRNA_Ecto-sp9_F_contig10674.604.1 vs.
Match: Hypothetical (protein n=1 Tax=Attheya septentrionalis TaxID=420275 RepID=A0A7S2UP57_9STRA)

HSP 1 Score: 353 bits (906), Expect = 2.720e-102
Identity = 279/652 (42.79%), Postives = 354/652 (54.29%), Query Frame = 1
Query:    4 MYELEDLKMNIKFEIEMLCQKFNVTIADVPMYGR-LRTRMTPAKEKNPDFNLSAHRAAARAEAERLREXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAGERAGAQ------AGXXXXXXXXXXDQQTVIPNLASYVTINPN-LEVF----AAQPQLK---DVLKRVVPVAVDRAIREIIQPVVERSVTIACITSKELVQKDFAMEADENKMRKAAHLMVSNLAGSLALVTCKEPLRVSIGNHMRSLLSTAAPGA---------------DQATTEGLVHLCSSENLELGCMLIEKAATEKAMRDIDEAVAPALQARRKSRETTGQPFYDMSIFNN--LRYPGALPESLRPKPGGLRPQQLLVYEAFQRVPRQPAVT-----RSPAAGPTPL--GGGPGGGAGGPSPRLLPSASPASPALSGMQGAXXXXXXXXXXXXGAGMSPQQAVELTLEQALTAWQAAIGRLDMAIGGLLTAHRRAGGGPELTLHAANRD---QELSAALQEIVTV-----GKSVPLSARE-DALTKFARAVFNRLFEMARGKEDNPAAVPLLRVEVYAAVLELCLRTVRTSLVSGRNKEDLLTQWYTGLPPQAIIGPGSRKLHLAALKYLVQMNMVDMEKTDAFLARS 1815
            +Y +EDLKMNIKFE+E+LC+     + D+P+    L  R  P K KNPDFNL +   +  +                                XXXXXXXXXXXX             G  AG Q       G          + QTVIPNLA+YVTINP+ LE+F      Q   K     LK  VP+AVDRAIREIIQPVVERSVTIACIT+KE+V KDFAME+DENKMRKAA LMV+N+AGSLALVTC+EPLRVS+  H+  LL++   G+               +Q+  E  V +C+++NLELGCMLIEKAATEKA+RD+DEA+AP+L ARRK RE TGQPFYDMSIF N   RYP ALPE LRPKPGGLR +QLLVYEAFQR+PRQP  +     +S  AGPT +  GG              PS+S     LS                  AG +   AV    +  + A  A  G+LD A+  LL+A       PE+TL     D   ++L AA+Q +        G+   L+A + D +  FA+ VF RL+E++  +         LR+E   A+LE  L+     L S       L  W T  P +     G RKLH   L  LV+ +++ + + D+FL R+
Sbjct: 1316 LYGVEDLKMNIKFEVEVLCKNMGFKLEDIPLRTNDLSKRFPPEKAKNPDFNLKSVMVSKTSAPT---TSSNQGSGSSTGGSSMAGHTVGVTPGXXXXXXXXXXXXGGMRSSAPTSVSLGPSAGGQFTLPSAVGQGSSKSGSTQEHQTVIPNLAAYVTINPSILELFQQGHGGQFSSKFDLSTLKANVPIAVDRAIREIIQPVVERSVTIACITTKEIVTKDFAMESDENKMRKAAQLMVANMAGSLALVTCREPLRVSVSTHLMQLLTSIVTGSSADGSNKSASQLNDQEQSALEQCVAICATDNLELGCMLIEKAATEKAVRDMDEALAPSLNARRKHREQTGQPFYDMSIFGNGSQRYPSALPEPLRPKPGGLRREQLLVYEAFQRMPRQPVASSQQQQQSTVAGPTGMVIGG--------------PSSSVRDVNLSSSNNVP------------AGNAAASAVSGQQQFNVDALSAIAGKLDSAVTTLLSAAGPRA--PEITLSMLPADHDVRQLLAAVQRVAAAVTSNSGEVKALTAADTDTILGFAQGVFKRLYELSLSEP--------LRLEALVALLE-ALKKCCAQLGSN------LGTWATYAPTETA---GQRKLHRTVLLLLVRSSLIPIGELDSFLTRN 1918          
BLAST of mRNA_Ecto-sp9_F_contig10674.604.1 vs.
Match: Ccr4-not (transcription n=2 Tax=Monodopsidaceae TaxID=425072 RepID=W7TUR4_9STRA)

HSP 1 Score: 352 bits (902), Expect = 9.290e-102
Identity = 244/615 (39.67%), Postives = 335/615 (54.47%), Query Frame = 1
Query:    1 QMYELEDLKMNIKFEIEMLCQKFNVTIADVPMYGRLRTRMTPAKEKNPDFNLSAHRAAARAEAERLREXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAGERAGAQAGXXXXXXXXXXDQQTVIPNLASYVTINPNLEVFAAQPQLKDVLKRVVPVAVDRAIREIIQPVVERSVTIACITSKELVQKDFAMEADENKMRKAAHLMVSNLAGSLALVTCKEPLRVSIGNHMRSLLSTAAPGADQATTEGLVHLCSSENLELGCMLIEKAATEKAMRDIDEAVAPALQARRKSRETTGQPFYDMSIFNNLRYPGALPESLRPKPG--GLRPQQLLVYEAFQRVPRQPAVTRSPAAGPTPLGGGPGGG------AGGPSPRLLPSASP-ASPALSGMQGAXXXXXXXXXXXXGAGMSPQQAVELTLEQALTAWQAAIGRLDMAIGGLLTAHRRAGGGPELTLHAANRDQELSAALQEIVTVGKSVPLSAREDALTKFARAVFNRLFEMARGKEDNPAAVPLLRVEVYAAVLELCLRTVRTSLVSGRNKEDLLTQWYTGLPPQAIIGPGSRKLHLAALKYLVQMNMVDMEKTDAFLARSI 1818
            ++Y+++DLK+NIKFEI++LC+  ++ IADVP    L+ R+ P KEKNPDFN+     +                                                               A    G           ++TVIPNLA+YV +NP + +F   P L+    R+VP+AVDRAIREIIQPVVERSVTIACITSKEL+ KDFAME DE KM KAAHLMVS+LAGSLALVTCKEPLRVS+GN +R+L + A  G +  +T+ ++ +C +ENLELGC+LIEKAATEKAMRDIDEA+A AL  R+K RE TG PFYDMSIF+N R+PGALP+ LRPKPG  GL P QL VYEAFQR     A+T    A  T +GG           AG     L+P   P +SP ++G                  G+       ++L QAL A  A + RL+ A+  L+ A      G ++T      + E+  A++E+V + +++P  ARED   + ++AVF  L+  +       AA P   +    +   + L  + T L   + K+  L  W   +P   +    +R+ H  AL  L++ +++     D++LA+S+
Sbjct: 1412 ELYQVDDLKINIKFEIDLLCKSLDLKIADVPFSNTLQGRLQPKKEKNPDFNVKVGLTST-------------------------------PMMSPQQGGMAGPELGAPGVGGGGGLGGNLEAETSIGRGTDGGEGTFAEETVIPNLAAYVVVNPQVALFTQSPHLR----RLVPLAVDRAIREIIQPVVERSVTIACITSKELIVKDFAMEPDEKKMGKAAHLMVSSLAGSLALVTCKEPLRVSMGNQLRTLFTQA--GVEAGSTDQVIQVCVAENLELGCILIEKAATEKAMRDIDEALAVALGHRKKHREQTGSPFYDMSIFSNSRFPGALPDMLRPKPGVGGLSPAQLDVYEAFQR-----ALTARGTAAATGVGGNAXXXXXXXXXAG----TLVPPLRPMSSPVMTGAMTVGEKKGLEGELGGAVGVG-----SVSLPQALEALDALVLRLNQALQNLVLA----AAGRDITFSMLGAEHEVPCAMRELVHLPQNLPSPAREDVALRASQAVFKMLYNNS-ASVGGGAASPSGGLSSLTSGEIVRLEALVTVLEGLQVKKADLLSWIGYVPVSEL----NRQSHKTALLLLLRSDLLKTSDMDSYLAKSM 1966          
BLAST of mRNA_Ecto-sp9_F_contig10674.604.1 vs.
Match: Uncharacterized (protein n=1 Tax=Thalassiosira oceanica TaxID=159749 RepID=K0TIV2_THAOC)

HSP 1 Score: 338 bits (867), Expect = 3.880e-97
Identity = 249/648 (38.43%), Postives = 321/648 (49.54%), Query Frame = 1
Query:    4 MYELEDLKMNIKFEIEMLCQKFNVTIADVPMYGRLRTRMTPAKEKNPDFNLSAHRAAARAEAERLREXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAGERAGAQAGXXXXXXXXXXDQQTVIPNLASYVTINPNLEVFAAQPQ--------LKDVLKRVVPVAVDRAIREIIQPVVERSVTIACITSKELVQKDFAMEADENKMRKAAHLMVSNLAGSLALVTCKE----------------------PLRVSIGNHMRSLLSTAAPGADQATTEGL-----------VHLCSSENLELGCMLIEKAATEKAMRDIDEAVAPALQARRKSRETTGQPFYDMSIFN--NLRYPGALPESLRPKPGGLRPQQLLVYEAFQRVPRQPAVTRSPAAGPTPLGGGPGGGAGGPSPRLLPSASPASPALSGMQGAXXXXXXXXXXXXGAGMSPQQAVELTLEQALTAWQAAIGRLDMAIGGLLTAHRRAGGGPELTLHAANRDQELSAALQEIVTVGKSVPLSAREDALTKFARAVFNRLFEMARGKEDNPAAVPLLRVEVYAAVLELCLRTVRTSLVSGRNKEDLLTQWYTGLPPQAIIGPGSRKLHLAALKYLVQMNMVDMEKTDAFLARSI 1818
            +Y ++DLKMNIKFE+E+LC+   V + DVPM   L TR+ P KEKNPDFNL A  AAA                                                          +    G  +            QQTVIPNLA+YV +NPNL     Q Q          DVL++ VP+AVDRAIREIIQPVVERSV+IACIT+K +V KDFAME+DENKMRKAA LMV+NLAGSLALVTC+E                      PL  SI +H+R LL+TA   A   TT  L           V +CS+ENLELGCMLIEKAATEKA+RD+DE +A  LQ R+ SRE TGQP+YDMSIF+    RYP  LP++LRPKPGGL  QQL++YE FQR PR PA  +S                           S  +P + G   A               M    A+ L L+++++               L++A  RA       + A +  ++L AA+  +V        SA  D +  F++ +F RL+E++  +         L++E   A+LEL L     +L  GR   D+ T W T  P +     G RKLH A L  LV+ +++ ME  D  L  +I
Sbjct: 1053 LYCVDDLKMNIKFEVEVLCKNLGVKLEDVPMRTDLSTRVPPVKEKNPDFNLKASSAAA---------------------------------TPSKAGQGGSGFNANAMMPSPDNKSSSASTGGDSTRSDGTSAADDQQQTVIPNLAAYVNVNPNLTQLFLQVQGGPLANNISADVLRKTVPIAVDRAIREIIQPVVERSVSIACITTKSIVTKDFAMESDENKMRKAAQLMVANLAGSLALVTCREVRPESNTQFKHIIIHFLTLRLQPLHTSISSHLRQLLTTAINNASAGTTVQLRDQETSALDQCVAICSTENLELGCMLIEKAATEKAVRDMDETLARDLQVRKTSREKTGQPYYDMSIFSVDGQRYPKELPDALRPKPGGLSSQQLMIYEGFQRTPRLPAPAQS---------------------------SDLTPGI-GSDSATSDGSSLASPTGQINMGAMNAIALKLDKSVSTL-------------LISAGPRAQEIHLSMIPAEHEIKQLIAAIPRVVNTSNRSLTSAETDLILSFSQVIFKRLYEVSLNER--------LKLEALIAMLEL-LNKACPAL--GR---DMCT-WATYAPTKT---DGQRKLHRAVLLLLVRSSLIKMEDLDGHLVNNI 1608          
BLAST of mRNA_Ecto-sp9_F_contig10674.604.1 vs.
Match: CCR4-NOT (transcription complex subunit 1 n=1 Tax=Hondaea fermentalgiana TaxID=2315210 RepID=A0A2R5GTV9_9STRA)

HSP 1 Score: 325 bits (834), Expect = 8.760e-93
Identity = 263/607 (43.33%), Postives = 343/607 (56.51%), Query Frame = 1
Query:    1 QMYELEDLKMNIKFEIEMLCQKFNVTIADVPMYGRLRTRMTPAKEKNPDFNLSAHRAAARAEAERLREXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAGERAGAQAGXXXXXXXXXXDQQTVIPNLASYVTINPNLEVFAAQPQLKDVLKRVVPVAVDRAIREIIQPVVERSVTIACITSKELVQKDFAMEADENKMRKAAHLMVSNLAGSLALVTCKEPLRVSIGNHMRSLLSTAAPGADQATTEGLVHLCSSENLELGCMLIEKAATEKAMRDIDEAVAPALQARRKSRETTGQPFYDMSIFNN-LRYPGALPESLRPKPG--GLRPQQLLVYEAFQRVPRQPAVTRSPAAGPTPLGGGPGGGAGGPSPRLLPSASPASPALSGMQGAXXXXXXXXXXXXGAGMSPQQAVELTLEQALTAWQAAIGRLDMAIGGLLTAHRRAGGGPELTLHAANRDQELSAALQEIVTVGKSVPLSAREDALTKFARAVFNRLFEMARGKEDNPAAVPLLRVEVYAAVLELCLRTVRTSLVSGRNKEDLLTQWYTGLPPQAIIGPGSRKLHLAALKYLVQMNMVDMEKTDAFLAR 1812
            ++Y+L +LK+N+KFEIE+LC+  ++ +  +     LR    P  E NPDFN  A    A                        XXXXXXXXXXXXXXXXX      XXXXXXXXXXX          XX         + T IPNL +YV INP L++F  QP L   L+RVVPVAVDRAIREIIQPVVERSVTIACIT++E++ KDFAME DE KMRKAAHLMVSNLAG+LALVTCKEPLR S+ +H+RSLL  A     Q   + +V  C+ ENLELGCMLIEKAATEKAMRDIDE +  +L  RR+SRE    P++DMS+F    RYPGALP++LRP P   GL P QLLVYE+FQR PRQP V  S AA    +GG   G      P++ P A     +  G                     P     ++  Q L  W+  + +++  +  L+TA   A G     L +   D E+ A L+E+ ++G+ +  + R+DA+  F + VF RL+E+  G +        L +EV+ A+LEL LR + +   S R     +T+W        I  P   KL+      L++  ++ +   D +LA+
Sbjct: 1184 ELYQLAELKLNLKFEIEVLCKNLSIDLKAIQPSNILRFCRRPQLESNPDFNFKASEKPA-----------------------PXXXXXXXXXXXXXXXXXQMNHGLXXXXXXXXXXXXXXXXXXXXXXXDDSKISAIPEHTEIPNLGAYVHINPGLQLFIQQPSL---LRRVVPVAVDRAIREIIQPVVERSVTIACITTREMITKDFAMEPDEKKMRKAAHLMVSNLAGALALVTCKEPLRASMSSHLRSLL--APRENQQGAVDEVVQHCAIENLELGCMLIEKAATEKAMRDIDEQIEKSLTLRRESRERHNTPYFDMSVFQTGNRYPGALPDNLRPTPSLQGLGPHQLLVYESFQRTPRQPMVPPSRAA----VGGSAAG------PQVKPGAKQQGQSAMGPG------------------KPPLGPAISNSQGLEKWRMHLIQINHLLQELITASPGARGAGVSQLPS---DHEILARLREMRSIGQQIAPAQRDDAVRTFVQPVFKRLYEIGAGDK--------LVLEVHLAMLEL-LRDLASDAASLRKS---ITEWV-------IYAPVEHKLNRQVTIGLIRTKLIHLADFDVYLAK 1712          
BLAST of mRNA_Ecto-sp9_F_contig10674.604.1 vs.
Match: Hypothetical (protein (Fragment) n=1 Tax=Phaeocystis antarctica TaxID=33657 RepID=A0A7S0EXF5_9EUKA)

HSP 1 Score: 294 bits (752), Expect = 2.120e-91
Identity = 155/232 (66.81%), Postives = 183/232 (78.88%), Query Frame = 1
Query:  415 QQTVIPNLASYVTINPNLEVFAAQPQLKDVLKRVVPVAVDRAIREIIQPVVERSVTIACITSKELVQKDFAMEADENKMRKAAHLMVSNLAGSLALVTCKEPLRVSIGNHMRSLLSTAAPGADQATTEGLVHLCSSENLELGCMLIEKAATEKAMRDIDEAVAPALQARRKSRETTGQPFYDMSIFNNLRYPGALPESLRPKPGGLRPQQLLVYEAFQRVPRQPAVTRSPAA 1110
            +QTVIPNLASYV IN  L++F  QPQLK    R+VP+A+DRAIREII PVVERSVTI+C+T++EL+ KDFAME DE +MRKAA LMV NLAGSLALVTCKEPLRV+ GNHMRSL+  AA   D    E +  +CSS+NLELGC LIEKAATEKA+RDI+EA+APA   RRK RE TG P+YDMSIF + RYP +LPE+LRPKPGGL+P Q  VYE F R+PR  A+ +   A
Sbjct:   51 EQTVIPNLASYVVINSGLQLFTQQPQLK----RIVPIAIDRAIREIISPVVERSVTISCVTTRELMLKDFAMEPDEQRMRKAAQLMVQNLAGSLALVTCKEPLRVACGNHMRSLMQQAA--IDPQLLEQVTQVCSSDNLELGCTLIEKAATEKAVRDIEEALAPAFAIRRKHREQTGLPYYDMSIFTSGRYPASLPEALRPKPGGLQPAQRRVYEDFGRIPRTAAMVQQQQA 276          
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp9_F_contig10674.604.1 vs.
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Ectocarpus species9 EcSCA_722f female vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
Uncharacterized0.000e+084.81protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 ... [more]
Uncharacterized0.000e+092.17protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=... [more]
CCR4-Not9.350e-14453.73complex component, Not1-domain-containing protein ... [more]
Hypothetical5.040e-10340.00protein n=1 Tax=Ditylum brightwellii TaxID=49249 R... [more]
Hypothetical5.910e-10340.00protein n=10 Tax=Ditylum brightwellii TaxID=49249 ... [more]
Hypothetical2.720e-10242.79protein n=1 Tax=Attheya septentrionalis TaxID=4202... [more]
Ccr4-not9.290e-10239.67transcription n=2 Tax=Monodopsidaceae TaxID=425072... [more]
Uncharacterized3.880e-9738.43protein n=1 Tax=Thalassiosira oceanica TaxID=15974... [more]
CCR4-NOT8.760e-9343.33transcription complex subunit 1 n=1 Tax=Hondaea fe... [more]
Hypothetical2.120e-9166.81protein (Fragment) n=1 Tax=Phaeocystis antarctica ... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp9_F_contig10674contigEcto-sp9_F_contig10674:406..4291 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 of Ectocarpus species9 EcSCA_722f female vs UniRef902022-09-19
OGS1.0 of Ectocarpus species9 EcSCA_722f female2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score1001.9
Seed ortholog evalue1.4e-289
Seed eggNOG ortholog2880.D8LMN2
KEGG koko:K12604
KEGG Pathwayko03018,map03018
GOsGO:0000288,GO:0000289,GO:0000932,GO:0000956,GO:0003674,GO:0005198,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006139,GO:0006351,GO:0006354,GO:0006401,GO:0006402,GO:0006417,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0009056,GO:0009057,GO:0009058,GO:0009059,GO:0009889,GO:0009890,GO:0009892,GO:0009987,GO:0010467,GO:0010468,GO:0010556,GO:0010558,GO:0010605,GO:0010608,GO:0010629,GO:0016070,GO:0016071,GO:0017148,GO:0018130,GO:0019222,GO:0019438,GO:0019439,GO:0030014,GO:0030015,GO:0031323,GO:0031324,GO:0031326,GO:0031327,GO:0032268,GO:0032269,GO:0032774,GO:0032947,GO:0032991,GO:0034248,GO:0034249,GO:0034641,GO:0034645,GO:0034654,GO:0034655,GO:0035770,GO:0036464,GO:0043170,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0044237,GO:0044238,GO:0044248,GO:0044249,GO:0044260,GO:0044265,GO:0044270,GO:0044271,GO:0044424,GO:0044444,GO:0044464,GO:0046483,GO:0046700,GO:0048519,GO:0048523,GO:0050789,GO:0050794,GO:0051171,GO:0051172,GO:0051246,GO:0051248,GO:0060255,GO:0065007,GO:0071704,GO:0080090,GO:0090304,GO:0097659,GO:1901360,GO:1901361,GO:1901362,GO:1901575,GO:1901576,GO:1990904,GO:2000112,GO:2000113
EggNOG free text desc.nuclear-transcribed mRNA catabolic process, deadenylation-dependent decay
EggNOG OGsCOG5103@1,KOG1831@2759
COG Functional cat.DK
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko00001,ko03019
Hectar predicted targeting categoryother localisation
Ec32 ortholog descriptionCCR4-Not complex component, Not1, C-terminal
Ec32 orthologEc-06_003890.1
Exons5
Model size1992
Cds size1989
Stop0
Start1
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp9_F_contig10674.604.1prot_Ecto-sp9_F_contig10674.604.1Ectocarpus species9 EcSCA_722f femalepolypeptideEcto-sp9_F_contig10674 406..4288 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622928285.7196195-CDS-Ecto-sp9_F_contig10674:405..6301622928285.7196195-CDS-Ecto-sp9_F_contig10674:405..630Ectocarpus species9 EcSCA_722f femaleCDSEcto-sp9_F_contig10674 406..630 -
1692277821.31669-CDS-Ecto-sp9_F_contig10674:405..6301692277821.31669-CDS-Ecto-sp9_F_contig10674:405..630Ectocarpus species9 EcSCA_722f femaleCDSEcto-sp9_F_contig10674 406..630 -
1622928285.7308166-CDS-Ecto-sp9_F_contig10674:1211..13821622928285.7308166-CDS-Ecto-sp9_F_contig10674:1211..1382Ectocarpus species9 EcSCA_722f femaleCDSEcto-sp9_F_contig10674 1212..1382 -
1692277821.326579-CDS-Ecto-sp9_F_contig10674:1211..13821692277821.326579-CDS-Ecto-sp9_F_contig10674:1211..1382Ectocarpus species9 EcSCA_722f femaleCDSEcto-sp9_F_contig10674 1212..1382 -
1622928285.7430587-CDS-Ecto-sp9_F_contig10674:1801..19451622928285.7430587-CDS-Ecto-sp9_F_contig10674:1801..1945Ectocarpus species9 EcSCA_722f femaleCDSEcto-sp9_F_contig10674 1802..1945 -
1692277821.3344955-CDS-Ecto-sp9_F_contig10674:1801..19451692277821.3344955-CDS-Ecto-sp9_F_contig10674:1801..1945Ectocarpus species9 EcSCA_722f femaleCDSEcto-sp9_F_contig10674 1802..1945 -
1622928285.7545552-CDS-Ecto-sp9_F_contig10674:2425..32201622928285.7545552-CDS-Ecto-sp9_F_contig10674:2425..3220Ectocarpus species9 EcSCA_722f femaleCDSEcto-sp9_F_contig10674 2426..3220 -
1692277821.3486133-CDS-Ecto-sp9_F_contig10674:2425..32201692277821.3486133-CDS-Ecto-sp9_F_contig10674:2425..3220Ectocarpus species9 EcSCA_722f femaleCDSEcto-sp9_F_contig10674 2426..3220 -
1622928285.7678757-CDS-Ecto-sp9_F_contig10674:3634..42881622928285.7678757-CDS-Ecto-sp9_F_contig10674:3634..4288Ectocarpus species9 EcSCA_722f femaleCDSEcto-sp9_F_contig10674 3635..4288 -
1692277821.3567472-CDS-Ecto-sp9_F_contig10674:3634..42881692277821.3567472-CDS-Ecto-sp9_F_contig10674:3634..4288Ectocarpus species9 EcSCA_722f femaleCDSEcto-sp9_F_contig10674 3635..4288 -


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622928285.7791653-UTR-Ecto-sp9_F_contig10674:4288..42911622928285.7791653-UTR-Ecto-sp9_F_contig10674:4288..4291Ectocarpus species9 EcSCA_722f femaleUTREcto-sp9_F_contig10674 4289..4291 -
1692277821.365422-UTR-Ecto-sp9_F_contig10674:4288..42911692277821.365422-UTR-Ecto-sp9_F_contig10674:4288..4291Ectocarpus species9 EcSCA_722f femaleUTREcto-sp9_F_contig10674 4289..4291 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_Ecto-sp9_F_contig10674.604.1

>prot_Ecto-sp9_F_contig10674.604.1 ID=prot_Ecto-sp9_F_contig10674.604.1|Name=mRNA_Ecto-sp9_F_contig10674.604.1|organism=Ectocarpus species9 EcSCA_722f female|type=polypeptide|length=663bp
MYELEDLKMNIKFEIEMLCQKFNVTIADVPMYGRLRTRMTPAKEKNPDFN
LSAHRAAARAEAERLREESAAAAASGAAATAAGGRAGNKNAGAGAAGSPE
DGTGRGEEGRGDQGRGAGERAGAQAGGGGGAAQKQQDQQTVIPNLASYVT
INPNLEVFAAQPQLKDVLKRVVPVAVDRAIREIIQPVVERSVTIACITSK
ELVQKDFAMEADENKMRKAAHLMVSNLAGSLALVTCKEPLRVSIGNHMRS
LLSTAAPGADQATTEGLVHLCSSENLELGCMLIEKAATEKAMRDIDEAVA
PALQARRKSRETTGQPFYDMSIFNNLRYPGALPESLRPKPGGLRPQQLLV
YEAFQRVPRQPAVTRSPAAGPTPLGGGPGGGAGGPSPRLLPSASPASPAL
SGMQGAGAGVGAGAGGRGGAGMSPQQAVELTLEQALTAWQAAIGRLDMAI
GGLLTAHRRAGGGPELTLHAANRDQELSAALQEIVTVGKSVPLSAREDAL
TKFARAVFNRLFEMARGKEDNPAAVPLLRVEVYAAVLELCLRTVRTSLVS
GRNKEDLLTQWYTGLPPQAIIGPGSRKLHLAALKYLVQMNMVDMEKTDAF
LARSIVSTFGGSPEEAANKGSQLHQRIQLLQEEWGLYAVALIRQCVFDHP
DSNGPEGKVYRVT
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mRNA from alignment at Ecto-sp9_F_contig10674:406..4291-

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_Ecto-sp9_F_contig10674.604.1 ID=mRNA_Ecto-sp9_F_contig10674.604.1|Name=mRNA_Ecto-sp9_F_contig10674.604.1|organism=Ectocarpus species9 EcSCA_722f female|type=mRNA|length=3886bp|location=Sequence derived from alignment at Ecto-sp9_F_contig10674:406..4291- (Ectocarpus species9 EcSCA_722f female)
CAGATGTACGAGCTGGAAGACCTCAAGATGAACATCAAGTTCGAGATCGA GATGCTCTGCCAGAAGTTCAACGTGACCATCGCAGACGTGCCCATGTACG GCCGGCTCCGCACGCGCATGACCCCTGCCAAGGAGAAGAACCCAGACTTC AACCTCTCGGCCCACCGGGCCGCGGCCCGCGCGGAAGCCGAGCGCCTGCG CGAGGAGTCGGCGGCCGCGGCCGCCTCGGGTGCCGCGGCGACGGCGGCGG GCGGCCGTGCCGGCAACAAGAACGCCGGCGCCGGCGCCGCGGGGTCGCCC GAGGATGGGACGGGGAGAGGGGAGGAAGGGAGGGGGGATCAGGGGCGGGG GGCGGGGGAGAGAGCGGGCGCGCAGGCGGGAGGTGGAGGCGGGGCGGCGC AGAAGCAGCAGGACCAGCAGACGGTCATCCCGAACCTTGCGTCGTACGTG ACGATTAACCCTAACCTGGAGGTTTTCGCGGCGCAGCCGCAGCTGAAGGA CGTGCTGAAGAGGGTGGTGCCGGTGGCGGTGGACCGGGCCATTCGGGAGA TCATCCAGCCCGTGGTGGAGAGGAGCGTGACTATCGCCTGCATCACGTCG AAGGAGCTGGTGCAGAAGGACTTCGCCATGGAGGCCGACGAGAACAAGAT GCGAAAGGTGTGTGGCGAACGGCGAGACTCTTGTTATAGTTTTTGTTTTC GCGAAAAACTATTTTGGTATGTTCGTTGTGGCGTGCGCGTTCTGTTTGGG TCCTGCTGGCTGGCATGTATGTGTAGCTCGTGTTTGAGTTGGGGCGTCGA CGCTACCTTGAAGCGGGCGGGACGAAGACAAAAAATATGCAATTGTTGGG TCGTTTTTTCGTTTTGTTCGAATTTGTTTTGTTGTGCAAGCACCACCAAT ATCTGCATCGCGTATCTGCATCCGTTTCGTTTCCTAGTGGTGCATCTTGA AAACAACACAAGCAAGAGTTATTCGATTGTGGTTATTCGATTGTGGCCTT AACGTCCTTCTTCCTTTCTTCGTTCCCCTTTTTTGTCACGTCGTTTTGCA ATCCTGTCCTGTGTGGTCCAGGCGGCCCACCTCATGGTGAGCAACCTCGC CGGCTCCCTCGCGCTGGTGACGTGCAAGGAGCCCCTCCGGGTCAGCATCG GCAACCACATGCGGTCCCTGCTGTCGACGGCCGCGCCGGGCGCCGACCAG GCCACGACGGAGGGGCTCGTCCACCTTTGCTCGTCGGAGAACCTGGAGCT GGGGTGCATGCTGATCGAGAAGGCGGCGACGGAGAAGGCCATGCGGGACA TCGACGAGGCGGTTGCTCCGGCGCTGCAGGCCCGGCGCAAGAGCCGGGAG ACCACGGGCCAGCCCTTCTACGACATGAGCATCTTCAACAACCTCCGCTA CCCGGGGGCCCTGCCGGAGTCGCTCCGGCCCAAGCCGGGCGGGCTCCGCC CGCAGCAGCTCCTGGTGTACGAGGCCTTCCAGCGGGTGCCGAGGCAGCCG GCGGTGACCCGCTCGCCCGCGGCCGGGCCCACGCCGTTGGGAGGGGGGCC CGGCGGAGGAGCCGGGGGGCCCTCCCCCCGGCTGCTGCCGTCGGCGTCCC CCGCGAGCCCCGCGCTGAGCGGCATGCAGGGAGCCGGGGCGGGGGTGGGG GCGGGGGCGGGGGGGCGCGGCGGCGCCGGCATGAGCCCGCAACAGGCGGT GGAGCTGACGCTGGAGCAAGCGCTGACGGCGTGGCAGGCGGCGATCGGGC GGCTGGACATGGCGATCGGAGGGCTGCTGACCGCGCACAGACGGGCCGGC GGCGGGCCGGAGCTGACGCTTCACGCCGCCAACCGGGACCAGGAGCTGTC GGCCGCGCTGCAGGAGGTAAGTGTTTGTGTTGGCCCGGAGCGGGATGGGG GGGGGGGGGGCTGAAGACCGTGCTACTTGCTGCTGAAGTGAGCACAGAGG AGAGGGATCACGGGGGGTGGGACGTTGTTCTGTTGTGGTTGAGGTTTGGC TGGACCTTGTTTGCCCGGTGCGGGTGTCGAAGTCTCGATCATCAGGGTCC TCTCTGCTTTTCCTGCCGACCTTCGTTGTCAAGGTTCTAAATTACATACA TCTATAATATTGGTTGCGGTCGTCGTTGTGAGCATCAAGCTTCGAAGAGT CCCAAGACAATTTTACCCTACAGTACCAGCGCCCTAGGCATCAAATTTCT CGGGCCGAGTTCCACCTGACCGAGAGACTCAACTTTCTTCCTCCCTCTCT CTCTTTGTCTCTTTCTCTCTTTCTCTCTCGCTCAATCTCATTGTGTTGCC TCTCTCCCGTCACAACGACGAACCTCTCTTTTCTTTGTTCATCCAGATCG TGACCGTCGGAAAGAGCGTGCCGCTGAGCGCGCGAGAAGACGCGCTCACC AAGTTCGCTCGCGCCGTGTTCAACCGTCTGTTCGAGATGGCCCGCGGCAA GGAAGACAACCCAGCCGCGGTTCCCCTGCTGAGAGTAGAGGTAAGAGGGC GAGGTACTCATGTTCTTGAGCGGCTAGACCGTTGGCCGTGGGGGAGGGGG AGCGGGGCGGATGAAAACGAGTACTCGTACGTAAATAGACCCCAGAGGCA AACGGGAGCTATCTAGTGGTACTTGTCGGGGTGATGGTGGGAAGGATTCA TGGTTCGCAAACTAATAGGGAGGGTTGGACAGACAAGACGTAGGGTGTGT TGTCGACCGTGGTCCCTTTCCCCTGTACGGTCGTGACTCAGCCAGCACTG ACTGGCGGCGCTATGGAGTATTGGTGGTGGTGGTCGTCGTTGTTGTCGTT GTTGCCCATCGCCATTTTCTTTTGATGTTTTTTTCATTTGCGGGGTCCGC CGCACCTCTTTGCTGCTGTTGTCGTTGCTGCTGCGGTCGTTCGTCATGTG GCATCACAGGTGTACGCGGCAGTGCTGGAGCTGTGCCTCCGGACGGTGAG GACCTCCCTCGTGTCCGGTCGGAACAAGGAGGACCTGCTCACGCAGTGGT ACACGGGGCTGCCCCCGCAGGCGATCATCGGGCCGGGCTCGAGGAAGCTC CACCTCGCCGCACTCAAGTACCTCGTTCAGGTGCGCCCTGGCCGTGGTGG CGTCGGTTTCGCTTGCTCTGTGATGCGTTATTTTTGTGTTTCGATAACTC GATGAATTAACGTATCCACAGGTCAGAGTCCGGGATAGATTTGGCAAATG AAGTAGTCTATAGCTTTCGGGTTATTGGTATGTTGTTTTTATTTTCTCTT ACAACTAGTTAACTCGAGGGATTCATCTCTCTTTATCCACAGGTCAGAGT CCGGGATAAATTGGCACATGAAGAAGTCCGTATTGCGTTTTCGAAACACA CCAGTACCTGTGTTTTGGTTTCTTCTTTTTGGCGTTTCACGGATATTGCT TCCGGTTTGTGTGTTTACTCGTCGTTGTGAATCGCACCTGATAGAGGCTC CGTTTACTCGTCCCCAAGGTGTCTGGATGTTTGGAAACACGACCAGCCTG GGACACGGGCGTTGTTGCAGTTCATTGGTTTTTTTAAGCTTTTTGAGATT CGCATGCCTCCCGCCAATCATCCCCACGCGCTGATTAGCCCTCCCTCATC TAATTTTCCCGCTTGACTACTGTTGTTGGTGGCGCGCTATGCTACGTTAC ATACGCTCCAGATGAACATGGTGGACATGGAGAAGACGGACGCCTTCCTC GCGCGAAGCATCGTCTCTACCTTCGGCGGTTCCCCCGAAGAGGCGGCCAA CAAAGGCTCCCAGCTCCACCAGCGCATCCAGCTGCTCCAGGAGGAGTGGG GCCTCTACGCCGTGGCGCTGATCCGGCAGTGCGTGTTCGACCACCCGGAC TCGAACGGCCCGGAGGGCAAGGTTTACCGGGTGACC
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Coding sequence (CDS) from alignment at Ecto-sp9_F_contig10674:406..4291-

>mRNA_Ecto-sp9_F_contig10674.604.1 ID=mRNA_Ecto-sp9_F_contig10674.604.1|Name=mRNA_Ecto-sp9_F_contig10674.604.1|organism=Ectocarpus species9 EcSCA_722f female|type=CDS|length=3978bp|location=Sequence derived from alignment at Ecto-sp9_F_contig10674:406..4291- (Ectocarpus species9 EcSCA_722f female)
ATGTACGAGCTGGAAGACCTCAAGATGAACATCAAGTTCGAGATCGAGAT
GCTCTGCCAGAAGTTCAACGTGACCATCGCAGACGTGCCCATGTACGGCC
GGCTCCGCACGCGCATGACCCCTGCCAAGGAGAAGAACCCAGACTTCAAC
CTCTCGGCCCACCGGGCCGCGGCCCGCGCGGAAGCCGAGCGCCTGCGCGA
GGAGTCGGCGGCCGCGGCCGCCTCGGGTGCCGCGGCGACGGCGGCGGGCG
GCCGTGCCGGCAACAAGAACGCCGGCGCCGGCGCCGCGGGGTCGCCCGAG
GATGGGACGGGGAGAGGGGAGGAAGGGAGGGGGGATCAGGGGCGGGGGGC
GGGGGAGAGAGCGGGCGCGCAGGCGGGAGGTGGAGGCGGGGCGGCGCAGA
AGCAGCAGGACCAGCAGACGGTCATCCCGAACCTTGCGTCGTACGTGACG
ATTAACCCTAACCTGGAGGTTTTCGCGGCGCAGCCGCAGCTGAAGGACGT
GCTGAAGAGGGTGGTGCCGGTGGCGGTGGACCGGGCCATTCGGGAGATCA
TCCAGCCCGTGGTGGAGAGGAGCGTGACTATCGCCTGCATCACGTCGAAG
GAGCTGGTGCAGAAGGACTTCGCCATGGAGGCCGACGAGAACAAGATGCG
AAAGATGTACGAGCTGGAAGACCTCAAGATGAACATCAAGTTCGAGATCG
AGATGCTCTGCCAGAAGTTCAACGTGACCATCGCAGACGTGCCCATGTAC
GGCCGGCTCCGCACGCGCATGACCCCTGCCAAGGAGAAGAACCCAGACTT
CAACCTCTCGGCCCACCGGGCCGCGGCCCGCGCGGAAGCCGAGCGCCTGC
GCGAGGAGTCGGCGGCCGCGGCCGCCTCGGGTGCCGCGGCGACGGCGGCG
GGCGGCCGTGCCGGCAACAAGAACGCCGGCGCCGGCGCCGCGGGGTCGCC
CGAGGATGGGACGGGGAGAGGGGAGGAAGGGAGGGGGGATCAGGGGCGGG
GGGCGGGGGAGAGAGCGGGCGCGCAGGCGGGAGGTGGAGGCGGGGCGGCG
CAGAAGCAGCAGGACCAGCAGACGGTCATCCCGAACCTTGCGTCGTACGT
GACGATTAACCCTAACCTGGAGGTTTTCGCGGCGCAGCCGCAGCTGAAGG
ACGTGCTGAAGAGGGTGGTGCCGGTGGCGGTGGACCGGGCCATTCGGGAG
ATCATCCAGCCCGTGGTGGAGAGGAGCGTGACTATCGCCTGCATCACGTC
GAAGGAGCTGGTGCAGAAGGACTTCGCCATGGAGGCCGACGAGAACAAGA
TGCGAAAGGCGGCCCACCTCATGGTGAGCAACCTCGCCGGCTCCCTCGCG
CTGGTGACGTGCAAGGAGCCCCTCCGGGTCAGCATCGGCAACCACATGCG
GTCCCTGCTGTCGACGGCCGCGCCGGGCGCCGACCAGGCCACGACGGAGG
GGCTCGTCCACCTTTGCTCGTCGGAGAACCTGGAGCTGGGGTGCATGCTG
ATCGAGAAGGCGGCGACGGAGAAGGCCATGCGGGACATCGACGAGGCGGT
TGCTCCGGCGCTGCAGGCCCGGCGCAAGAGCCGGGAGACCACGGGCCAGC
CCTTCTACGACATGAGCATCTTCAACAACCTCCGCTACCCGGGGGCCCTG
CCGGAGTCGCTCCGGCCCAAGCCGGGCGGGCTCCGCCCGCAGCAGCTCCT
GGTGTACGAGGCCTTCCAGCGGGTGCCGAGGCAGCCGGCGGTGACCCGCT
CGCCCGCGGCCGGGCCCACGCCGTTGGGAGGGGGGCCCGGCGGAGGAGCC
GGGGGGCCCTCCCCCCGGCTGCTGCCGTCGGCGTCCCCCGCGAGCCCCGC
GCTGAGCGGCATGCAGGGAGCCGGGGCGGGGGTGGGGGCGGGGGCGGGGG
GGCGCGGCGGCGCCGGCATGAGCCCGCAACAGGCGGTGGAGCTGACGCTG
GAGCAAGCGCTGACGGCGTGGCAGGCGGCGATCGGGCGGCTGGACATGGC
GATCGGAGGGCTGCTGACCGCGCACAGACGGGCCGGCGGCGGGCCGGAGC
TGACGCTTCACGCCGCCAACCGGGACCAGGAGCTGTCGGCCGCGCTGCAG
GAGGCGGCCCACCTCATGGTGAGCAACCTCGCCGGCTCCCTCGCGCTGGT
GACGTGCAAGGAGCCCCTCCGGGTCAGCATCGGCAACCACATGCGGTCCC
TGCTGTCGACGGCCGCGCCGGGCGCCGACCAGGCCACGACGGAGGGGCTC
GTCCACCTTTGCTCGTCGGAGAACCTGGAGCTGGGGTGCATGCTGATCGA
GAAGGCGGCGACGGAGAAGGCCATGCGGGACATCGACGAGGCGGTTGCTC
CGGCGCTGCAGGCCCGGCGCAAGAGCCGGGAGACCACGGGCCAGCCCTTC
TACGACATGAGCATCTTCAACAACCTCCGCTACCCGGGGGCCCTGCCGGA
GTCGCTCCGGCCCAAGCCGGGCGGGCTCCGCCCGCAGCAGCTCCTGGTGT
ACGAGGCCTTCCAGCGGGTGCCGAGGCAGCCGGCGGTGACCCGCTCGCCC
GCGGCCGGGCCCACGCCGTTGGGAGGGGGGCCCGGCGGAGGAGCCGGGGG
GCCCTCCCCCCGGCTGCTGCCGTCGGCGTCCCCCGCGAGCCCCGCGCTGA
GCGGCATGCAGGGAGCCGGGGCGGGGGTGGGGGCGGGGGCGGGGGGGCGC
GGCGGCGCCGGCATGAGCCCGCAACAGGCGGTGGAGCTGACGCTGGAGCA
AGCGCTGACGGCGTGGCAGGCGGCGATCGGGCGGCTGGACATGGCGATCG
GAGGGCTGCTGACCGCGCACAGACGGGCCGGCGGCGGGCCGGAGCTGACG
CTTCACGCCGCCAACCGGGACCAGGAGCTGTCGGCCGCGCTGCAGGAGAT
CGTGACCGTCGGAAAGAGCGTGCCGCTGAGCGCGCGAGAAGACGCGCTCA
CCAAGTTCGCTCGCGCCGTGTTCAACCGTCTGTTCGAGATGGCCCGCGGC
AAGGAAGACAACCCAGCCGCGGTTCCCCTGCTGAGAGTAGAGATCGTGAC
CGTCGGAAAGAGCGTGCCGCTGAGCGCGCGAGAAGACGCGCTCACCAAGT
TCGCTCGCGCCGTGTTCAACCGTCTGTTCGAGATGGCCCGCGGCAAGGAA
GACAACCCAGCCGCGGTTCCCCTGCTGAGAGTAGAGGTGTACGCGGCAGT
GCTGGAGCTGTGCCTCCGGACGGTGAGGACCTCCCTCGTGTCCGGTCGGA
ACAAGGAGGACCTGCTCACGCAGTGGTACACGGGGCTGCCCCCGCAGGCG
ATCATCGGGCCGGGCTCGAGGAAGCTCCACCTCGCCGCACTCAAGTACCT
CGTTCAGGTGTACGCGGCAGTGCTGGAGCTGTGCCTCCGGACGGTGAGGA
CCTCCCTCGTGTCCGGTCGGAACAAGGAGGACCTGCTCACGCAGTGGTAC
ACGGGGCTGCCCCCGCAGGCGATCATCGGGCCGGGCTCGAGGAAGCTCCA
CCTCGCCGCACTCAAGTACCTCGTTCAGATGAACATGGTGGACATGGAGA
AGACGGACGCCTTCCTCGCGCGAAGCATCGTCTCTACCTTCGGCGGTTCC
CCCGAAGAGGCGGCCAACAAAGGCTCCCAGCTCCACCAGCGCATCCAGCT
GCTCCAGGAGGAGTGGGGCCTCTACGCCGTGGCGCTGATCCGGCAGTGCG
TGTTCGACCACCCGGACTCGAACGGCCCGGAGGGCAAGGTTTACCGGGTG
ACCATGAACATGGTGGACATGGAGAAGACGGACGCCTTCCTCGCGCGAAG
CATCGTCTCTACCTTCGGCGGTTCCCCCGAAGAGGCGGCCAACAAAGGCT
CCCAGCTCCACCAGCGCATCCAGCTGCTCCAGGAGGAGTGGGGCCTCTAC
GCCGTGGCGCTGATCCGGCAGTGCGTGTTCGACCACCCGGACTCGAACGG
CCCGGAGGGCAAGGTTTACCGGGTGACC
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