prot_Ecto-sp9_F_contig1067.600.1 (polypeptide) Ectocarpus species9 EcSCA_722f female

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp9_F_contig1067.600.1
Unique Nameprot_Ecto-sp9_F_contig1067.600.1
Typepolypeptide
OrganismEctocarpus species9 EcSCA_722f female (Ectocarpus species9 EcSCA_722f female)
Sequence length240
Homology
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BLAST of mRNA_Ecto-sp9_F_contig1067.600.1 vs.
Match: Uncharacterized (protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JG29_9PHAE)

HSP 1 Score: 262 bits (670), Expect = 7.350e-77
Identity = 166/198 (83.84%), Postives = 174/198 (87.88%), Query Frame = 0 
Query:    2 AAGTRETFREKLRRHLLPANWIKSVQLDGPTGADADASRRLTWNHGGGSGSSDSFDSGDGGSVCSNGVTGVESSDGKACCPSECGSCSTGCDRRRLGXXXXXXXXXXXXXXXXXXXLTYGHNDSXXXXXXXSDDGYEEYCDCNTRRALRSGSSXXXXXXXXXXXXTGPELEVECCADTIVDNGQMCDDVGSAPCVIGG 199
            AAGT ETFR+KLR HL PANW+KSVQLDGPTG +ADASRRLTWNHGGGSGSSDS+DSGDGG++CSNG+ GVESSDGKACCPSECGSCSTGCDRRRLG XXXXXXXXXXXXXXXXXX           XXXXSDDGYEEYCDCNTRRALRSGS     XXXXXXXXTGP+  VECCADTIVDNGQMCDDVGSAPCVIGG
Sbjct:    5 AAGTPETFRDKLRHHLSPANWMKSVQLDGPTGTEADASRRLTWNHGGGSGSSDSYDSGDGGAICSNGLAGVESSDGKACCPSECGSCSTGCDRRRLGWXXXXXXXXXXXXXXXXXXXXXXXX-----XXXXSDDGYEEYCDCNTRRALRSGSFSDSGXXXXXXXXTGPDPAVECCADTIVDNGQMCDDVGSAPCVIGG 197
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BLAST of mRNA_Ecto-sp9_F_contig1067.600.1 vs.
Match: WSC (domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FJ68_ECTSI)

HSP 1 Score: 226 bits (575), Expect = 4.300e-64
Identity = 149/204 (73.04%), Postives = 151/204 (74.02%), Query Frame = 0 
Query:    1 QAAGTRETFREKLRRHLLPANWIKSVQLDGPTGADADASRRLTWNHGGGSGSSDSFDSGDGGSVCSNGVTGVESSDGKACCPSECGSCSTGCDRRRLGXXXXXXXXXXXXXXXXXXXLTYGHNDSXXXXXXXSDDGYEEYCDCNTRRALRSGSSXXXXXXXXXXXXTGPELEVECCADTIVDNGQMCDDVGSAPCVIGGSTPEP 204
            QAAGT ETFREKLRRHL PANWIKSVQLDGPTG DADASRRLTWNHGG SGSSD  +S DGGS+CSNGVTGVESSDGKACCPSECGSCSTGCDRRRLG                XXX        XXXXXXX                      XXXXXXXXXXXXTGPELEVECCADTIVDNGQMCDDVGSAPCVIGGSTPEP
Sbjct:   40 QAAGTPETFREKLRRHLSPANWIKSVQLDGPTGNDADASRRLTWNHGGDSGSSDDSNSNDGGSMCSNGVTGVESSDGKACCPSECGSCSTGCDRRRLGGRDSSDNDTICGTRRRXXXXXXXXXXXXXXXXXXX-----XXXXXXXXXXXXXXXXXXXXXXXXXXXXTGPELEVECCADTIVDNGQMCDDVGSAPCVIGGSTPEP 238
[Close]
BLAST of mRNA_Ecto-sp9_F_contig1067.600.1 vs.
Match: Uncharacterized (protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JII7_9PHAE)

HSP 1 Score: 59.3 bits (142), Expect = 1.450e-6
Identity = 38/75 (50.67%), Postives = 44/75 (58.67%), Query Frame = 0 
Query:  134 DDGYEEYCDCNT--RRALRSGSSXXXXXXXXXXXXTG--------PELEVECCADTIVDNGQMCDDVGSAPCVIG 198
            DDGYEEYCDC+   R + R G S        XXXX          P  E+ECCADTIV++  MCD  GSAPCV+G
Sbjct:  369 DDGYEEYCDCSLSGRYSPRYGDSSDSGGSSDXXXXXXXQCXXXXXPAPELECCADTIVEDDAMCDIFGSAPCVLG 443
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp9_F_contig1067.600.1 vs.
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Ectocarpus species9 EcSCA_722f female vs UniRef90)
Total hits: 3
Match NameE-valueIdentityDescription
Uncharacterized7.350e-7783.84protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=... [more]
WSC4.300e-6473.04domain-containing protein n=1 Tax=Ectocarpus silic... [more]
Uncharacterized1.450e-650.67protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp9_F_contig1067contigEcto-sp9_F_contig1067:19727..21395 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Ectocarpus species9 EcSCA_722f female2022-09-29
Diamond blastp: OGS1.0 of Ectocarpus species9 EcSCA_722f female vs UniRef902022-09-16
OGS1.0 of Ectocarpus species9 EcSCA_722f female2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp9_F_contig1067.600.1mRNA_Ecto-sp9_F_contig1067.600.1Ectocarpus species9 EcSCA_722f femalemRNAEcto-sp9_F_contig1067 19727..21395 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp9_F_contig1067.600.1 ID=prot_Ecto-sp9_F_contig1067.600.1|Name=mRNA_Ecto-sp9_F_contig1067.600.1|organism=Ectocarpus species9 EcSCA_722f female|type=polypeptide|length=240bp
QAAGTRETFREKLRRHLLPANWIKSVQLDGPTGADADASRRLTWNHGGGS
GSSDSFDSGDGGSVCSNGVTGVESSDGKACCPSECGSCSTGCDRRRLGGG
GSSDDDTICGTRKRRRRLTYGHNDSNDDDSNDSDDGYEEYCDCNTRRALR
SGSSSDSGSECECECETGPELEVECCADTIVDNGQMCDDVGSAPCVIGGS
TPEPTPEPTPEPTPEPTREPTPEPTAEPAADPTGETSVA*
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