prot_Ecto-sp9_F_contig9985.18048.1 (polypeptide) Ectocarpus species9 EcSCA_722f female

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp9_F_contig9985.18048.1
Unique Nameprot_Ecto-sp9_F_contig9985.18048.1
Typepolypeptide
OrganismEctocarpus species9 EcSCA_722f female (Ectocarpus species9 EcSCA_722f female)
Sequence length157
Homology
BLAST of mRNA_Ecto-sp9_F_contig9985.18048.1 vs.
Match: Zinc (finger BED domain-containing 1-like protein n=1 Tax=Labeo rohita TaxID=84645 RepID=A0A498LK61_LABRO)

HSP 1 Score: 77.8 bits (190), Expect = 5.130e-15
Identity = 38/66 (57.58%), Postives = 47/66 (71.21%), Query Frame = 0
Query:   87 GGPLKWWKQKEELYPTLSKLAFRFLAVQATSAASERLFSTAKLVMTDKRSRLTDDNAENHIFLSSN 152
              PLKWWK  E  YP LSKLA R+LAVQATS ASER+FSTA  ++T +R+ L+ +N +  IFL  N
Sbjct:  107 SNPLKWWKDNENQYPNLSKLAKRYLAVQATSVASERVFSTAGDIVTSQRAALSTENVDILIFLKKN 172          
BLAST of mRNA_Ecto-sp9_F_contig9985.18048.1 vs.
Match: Hypothetical (protein n=1 Tax=Didymodactylos carnosus TaxID=1234261 RepID=A0A815D159_9BILA)

HSP 1 Score: 79.3 bits (194), Expect = 2.680e-14
Identity = 36/63 (57.14%), Postives = 51/63 (80.95%), Query Frame = 0
Query:   90 LKWWKQKEELYPTLSKLAFRFLAVQATSAASERLFSTAKLVMTDKRSRLTDDNAENHIFLSSN 152
            L+WWK K+  YP LS+LA ++L++Q++SA SER+FSTA L+ +D+RSRLT DNA+  IFL+ N
Sbjct:  534 LEWWKSKQTKYPVLSELARKYLSIQSSSAPSERIFSTAGLITSDRRSRLTPDNADTIIFLNKN 596          
BLAST of mRNA_Ecto-sp9_F_contig9985.18048.1 vs.
Match: Dimer_Tnp_hAT (domain-containing protein n=1 Tax=Amphimedon queenslandica TaxID=400682 RepID=A0A1X7SKD3_AMPQE)

HSP 1 Score: 74.7 bits (182), Expect = 3.480e-14
Identity = 36/70 (51.43%), Postives = 49/70 (70.00%), Query Frame = 0
Query:   83 IYDLGGPLKWWKQKEELYPTLSKLAFRFLAVQATSAASERLFSTAKLVMTDKRSRLTDDNAENHIFLSSN 152
            I+    PL+WWK  E  +PT++++A R+L V ATS  SER+FS A LV+ +KRS LT +NA+  IFLS N
Sbjct:   69 IHHDSDPLEWWKANESRFPTIARIARRYLCVPATSVPSERVFSAAGLVINNKRSSLTPENADMLIFLSKN 138          
BLAST of mRNA_Ecto-sp9_F_contig9985.18048.1 vs.
Match: Dimer_Tnp_hAT (domain-containing protein n=2 Tax=Caligus rogercresseyi TaxID=217165 RepID=A0A7T8H2B9_CALRO)

HSP 1 Score: 76.6 bits (187), Expect = 2.310e-13
Identity = 36/64 (56.25%), Postives = 47/64 (73.44%), Query Frame = 0
Query:   89 PLKWWKQKEELYPTLSKLAFRFLAVQATSAASERLFSTAKLVMTDKRSRLTDDNAENHIFLSSN 152
            PL WW      YP LSKLAF++L+VQATS +SERLFSTA  ++ D+R+RL++ NAE  I L +N
Sbjct:  496 PLLWWHSNRMKYPLLSKLAFKYLSVQATSVSSERLFSTAGQILNDRRNRLSESNAEKMIILHNN 559          
BLAST of mRNA_Ecto-sp9_F_contig9985.18048.1 vs.
Match: BED-type (domain-containing protein n=1 Tax=Cyprinus carpio TaxID=7962 RepID=A0A8C2FYL1_CYPCA)

HSP 1 Score: 76.6 bits (187), Expect = 2.350e-13
Identity = 39/69 (56.52%), Postives = 48/69 (69.57%), Query Frame = 0
Query:   87 GGPLKWWKQKEELYPTLSKLAFRFLAVQATSAASERLFSTAKLVMTDKRSRLTDDNAENHIFLSSNGTI 155
              PLKWWK  E  YP LSKLA R+LAVQATS ASER+FSTA  ++T +R+ L+ +N +  IFL  N  I
Sbjct:  565 SNPLKWWKDNEHQYPHLSKLAKRYLAVQATSVASERVFSTAGDIVTAQRAALSPENVDILIFLKKNMKI 633          
BLAST of mRNA_Ecto-sp9_F_contig9985.18048.1 vs.
Match: Zinc (finger BED domain-containing protein 1-like n=2 Tax=Clupeocephala TaxID=186625 RepID=A0A3B1JJI0_ASTMX)

HSP 1 Score: 76.3 bits (186), Expect = 3.200e-13
Identity = 42/85 (49.41%), Postives = 53/85 (62.35%), Query Frame = 0
Query:   68 ELTWYRVMPPEKCDVIYDLGGPLKWWKQKEELYPTLSKLAFRFLAVQATSAASERLFSTAKLVMTDKRSRLTDDNAENHIFLSSN 152
            E+  YR+       VI     PLKWWK  E  YP LSKL+  +LAVQATS ASER+FSTA  ++T +R+ L+ DN +  IFL  N
Sbjct:  548 EIELYRM-----AKVISVDANPLKWWKNNEHQYPNLSKLSKHYLAVQATSVASERVFSTAGDIVTAQRAALSPDNVDILIFLKKN 627          
BLAST of mRNA_Ecto-sp9_F_contig9985.18048.1 vs.
Match: zinc (finger BED domain-containing protein 4-like n=1 Tax=Cyprinus carpio TaxID=7962 RepID=UPI001C59CA0C)

HSP 1 Score: 74.7 bits (182), Expect = 5.790e-13
Identity = 38/69 (55.07%), Postives = 47/69 (68.12%), Query Frame = 0
Query:   87 GGPLKWWKQKEELYPTLSKLAFRFLAVQATSAASERLFSTAKLVMTDKRSRLTDDNAENHIFLSSNGTI 155
              PLKWWK  E  YP LSKLA  +LAVQATS ASER+FSTA  ++T +R+ L+ +N +  IFL  N  I
Sbjct:  249 SNPLKWWKDNEHQYPHLSKLAKHYLAVQATSVASERVFSTAGDIVTAQRAALSPENVDILIFLKKNMKI 317          
BLAST of mRNA_Ecto-sp9_F_contig9985.18048.1 vs.
Match: BED-type (domain-containing protein n=1 Tax=Amphimedon queenslandica TaxID=400682 RepID=A0A1X7T780_AMPQE)

HSP 1 Score: 74.7 bits (182), Expect = 1.090e-12
Identity = 36/70 (51.43%), Postives = 49/70 (70.00%), Query Frame = 0
Query:   83 IYDLGGPLKWWKQKEELYPTLSKLAFRFLAVQATSAASERLFSTAKLVMTDKRSRLTDDNAENHIFLSSN 152
            I+    PL+WWK  E  +PT++++A R+L V ATS  SER+FS A LV+ +KRS LT +NA+  IFLS N
Sbjct:  522 IHHDSDPLEWWKANESRFPTIARIARRYLCVPATSVPSERVFSAAGLVINNKRSSLTPENADMLIFLSKN 591          
BLAST of mRNA_Ecto-sp9_F_contig9985.18048.1 vs.
Match: BED-type (domain-containing protein n=2 Tax=Macrosiphini TaxID=33386 RepID=J9LJT7_ACYPI)

HSP 1 Score: 73.9 bits (180), Expect = 2.050e-12
Identity = 38/85 (44.71%), Postives = 53/85 (62.35%), Query Frame = 0
Query:   68 ELTWYRVMPPEKCDVIYDLGGPLKWWKQKEELYPTLSKLAFRFLAVQATSAASERLFSTAKLVMTDKRSRLTDDNAENHIFLSSN 152
            E+ +Y  +P      I     PLKWW     +YP L+ LA +FL +QATS ASER+FS   L++TD R+ LT+D+A   +FLS+N
Sbjct:  557 EIEFYTGLP-----TISFCQNPLKWWNLNSSMYPFLTILARKFLTIQATSVASERVFSKGGLIVTDHRATLTNDHASQLVFLSAN 636          
BLAST of mRNA_Ecto-sp9_F_contig9985.18048.1 vs.
Match: zinc (finger BED domain-containing protein 4-like n=1 Tax=Melanaphis sacchari TaxID=742174 RepID=UPI000DC13A7D)

HSP 1 Score: 70.9 bits (172), Expect = 2.630e-12
Identity = 35/65 (53.85%), Postives = 45/65 (69.23%), Query Frame = 0
Query:   88 GPLKWWKQKEELYPTLSKLAFRFLAVQATSAASERLFSTAKLVMTDKRSRLTDDNAENHIFLSSN 152
             PLKWWK     +PTL+KLA ++L +Q TS  SER+FS A  V+TD RS L+ ++AE  IFLS N
Sbjct:  112 NPLKWWKLFHSEFPTLAKLATKYLCIQGTSVLSERIFSCAGNVITDHRSSLSPEHAEELIFLSMN 176          
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp9_F_contig9985.18048.1 vs.
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Ectocarpus species9 EcSCA_722f female vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
Zinc5.130e-1557.58finger BED domain-containing 1-like protein n=1 Ta... [more]
Hypothetical2.680e-1457.14protein n=1 Tax=Didymodactylos carnosus TaxID=1234... [more]
Dimer_Tnp_hAT3.480e-1451.43domain-containing protein n=1 Tax=Amphimedon queen... [more]
Dimer_Tnp_hAT2.310e-1356.25domain-containing protein n=2 Tax=Caligus rogercre... [more]
BED-type2.350e-1356.52domain-containing protein n=1 Tax=Cyprinus carpio ... [more]
Zinc3.200e-1349.41finger BED domain-containing protein 1-like n=2 Ta... [more]
zinc5.790e-1355.07finger BED domain-containing protein 4-like n=1 Ta... [more]
BED-type1.090e-1251.43domain-containing protein n=1 Tax=Amphimedon queen... [more]
BED-type2.050e-1244.71domain-containing protein n=2 Tax=Macrosiphini Tax... [more]
zinc2.630e-1253.85finger BED domain-containing protein 4-like n=1 Ta... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0 of Ectocarpus species9 EcSCA_722f female
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR008906HAT, C-terminal dimerisation domainPFAMPF05699Dimer_Tnp_hATcoord: 89..151
e-value: 1.8E-19
score: 69.3
NoneNo IPR availablePANTHERPTHR47611FAMILY NOT NAMEDcoord: 88..152
IPR012337Ribonuclease H-like superfamilySUPERFAMILY53098Ribonuclease H-likecoord: 37..152

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp9_F_contig9985contigEcto-sp9_F_contig9985:990..1460 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Ectocarpus species9 EcSCA_722f female2022-09-29
Diamond blastp: OGS1.0 of Ectocarpus species9 EcSCA_722f female vs UniRef902022-09-16
OGS1.0 of Ectocarpus species9 EcSCA_722f female2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp9_F_contig9985.18048.1mRNA_Ecto-sp9_F_contig9985.18048.1Ectocarpus species9 EcSCA_722f femalemRNAEcto-sp9_F_contig9985 990..2181 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp9_F_contig9985.18048.1 ID=prot_Ecto-sp9_F_contig9985.18048.1|Name=mRNA_Ecto-sp9_F_contig9985.18048.1|organism=Ectocarpus species9 EcSCA_722f female|type=polypeptide|length=157bp
MRSGYVLEEPDEEVDPKSLAGRLKEAAASRWELVDSSDGDDDNEDDEPRR
KKKKLDPSERPYAEGLAELTWYRVMPPEKCDVIYDLGGPLKWWKQKEELY
PTLSKLAFRFLAVQATSAASERLFSTAKLVMTDKRSRLTDDNAENHIFLS
SNGTIG*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR008906HATC_C_dom
IPR012337RNaseH-like_sf