prot_Ecto-sp9_F_contig9967.18032.1 (polypeptide) Ectocarpus species9 EcSCA_722f female

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview


Name	mRNA_Ecto-sp9_F_contig9967.18032.1
Unique Name	prot_Ecto-sp9_F_contig9967.18032.1
Type	polypeptide
Organism	Ectocarpus species9 EcSCA_722f female (Ectocarpus species9 EcSCA_722f female)
Sequence length	100

Homology

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BLAST of mRNA_Ecto-sp9_F_contig9967.18032.1 vs.
Match: Uncharacterized (protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G5N7_ECTSI)

HSP 1 Score: 152 bits (383), Expect = 1.020e-45
Identity = 83/94 (88.30%), Postives = 85/94 (90.43%), Query Frame = 0

Query:    1 MGGNDEEDSRATEPVTAAEVNIASDGSVVGGPDEADVAGLIEEKKDEEGETAVASSTESSSCSPTGGDGGRKWKGLHVGVWLAIGAGVAVGAAL 94
            MGGNDEED RA+EPVTAAEV+IASDGSVVGGPDEADVAGLIEE KDEEGETAVASSTE      TGGDGGRK KGLHVGVWLAIGAGVAVGAAL
Sbjct:    1 MGGNDEEDPRASEPVTAAEVDIASDGSVVGGPDEADVAGLIEETKDEEGETAVASSTEXXXXXXTGGDGGRKRKGLHVGVWLAIGAGVAVGAAL 94

[Close]

BLAST of mRNA_Ecto-sp9_F_contig9967.18032.1 vs.
Match: Uncharacterized (protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G5Q5_ECTSI)

HSP 1 Score: 147 bits (371), Expect = 7.520e-43
Identity = 78/100 (78.00%), Postives = 87/100 (87.00%), Query Frame = 0

Query:    1 MGGNDEEDSRATEPVTAAEVNIASDGSVVGGPDEADVAGLIEEKKDEEGETA-VASSTESSSCSPTGGDGGRKWKGLHVGVWLAIGAGVAVGAALWSRRR 99
            + GNDEEDSRA EPV AAE+ +AS+ + +GGPD A VAGLIEE KDEEGETA VASSTESSS SPTGGDG  KWKG+H+GVWLA+GAGVAVGAALWSRRR
Sbjct:  100 VAGNDEEDSRAIEPVIAAEMPVASNENTLGGPDVAHVAGLIEESKDEEGETAAVASSTESSSSSPTGGDGRHKWKGIHIGVWLAVGAGVAVGAALWSRRR 199

[Close]

BLAST of mRNA_Ecto-sp9_F_contig9967.18032.1 vs.
Match: Uncharacterized (protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G5Q4_ECTSI)

HSP 1 Score: 91.7 bits (226), Expect = 1.380e-21
Identity = 54/68 (79.41%), Postives = 59/68 (86.76%), Query Frame = 0

Query:    5 DEEDSRATEPVTAAEVNIASDGSVVGGPDEADVAGLIEEKKDEEGETAVASSTESSSCSPTGGDGGRK 72
            DEEDSRAT+PVTAAEV IAS+ + + GPD ADVAGL EE KDEEG+TAVASSTESSS SPTGGDGG K
Sbjct:   76 DEEDSRATDPVTAAEVPIASNENTLAGPDAADVAGLFEEAKDEEGKTAVASSTESSS-SPTGGDGGHK 142

The following BLAST results are available for this feature:

BLAST of mRNA_Ecto-sp9_F_contig9967.18032.1 vs.

BLAST of mRNA_Ecto-sp9_F_contig9967.18032.1 vs.
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Ectocarpus species9 EcSCA_722f female vs UniRef90)
Total hits: 3


Match Name	E-value	Identity	Description
Uncharacterized	1.020e-45	88.30	protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 ...	[more]
Uncharacterized	7.520e-43	78.00	protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 ...	[more]
Uncharacterized	1.380e-21	79.41	protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 ...	[more]

InterPro

Analysis Name: InterProScan on OGS1.0 of Ectocarpus species9 EcSCA_722f female
Date Performed: 2022-09-29


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	PHOBIUS	NON_CYTOPLASMIC_DOMAIN	Non cytoplasmic domain	coord: 1..77
None	No IPR available	PHOBIUS	TRANSMEMBRANE	Transmembrane region	coord: 78..96
None	No IPR available	PHOBIUS	CYTOPLASMIC_DOMAIN	Cytoplasmic domain	coord: 97..99
None	No IPR available	TMHMM	TMhelix		coord: 77..96

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
Ecto-sp9_F_contig9967	contig	Ecto-sp9_F_contig9967:2417..2716 +

Analyses

This polypeptide is derived from or has results from the following analyses


Analysis Name	Date Performed
InterProScan on OGS1.0 of Ectocarpus species9 EcSCA_722f female	2022-09-29
Diamond blastp: OGS1.0 of Ectocarpus species9 EcSCA_722f female vs UniRef90	2022-09-16
OGS1.0 of Ectocarpus species9 EcSCA_722f female	2021-02-24

Relationships

This polypeptide derives from the following mRNA feature(s):


Feature Name	Unique Name	Species	Type	Position
mRNA_Ecto-sp9_F_contig9967.18032.1	mRNA_Ecto-sp9_F_contig9967.18032.1	Ectocarpus species9 EcSCA_722f female	mRNA	Ecto-sp9_F_contig9967 2417..2751 +

Sequences

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>prot_Ecto-sp9_F_contig9967.18032.1 ID=prot_Ecto-sp9_F_contig9967.18032.1|Name=mRNA_Ecto-sp9_F_contig9967.18032.1|organism=Ectocarpus species9 EcSCA_722f female|type=polypeptide|length=100bp
MGGNDEEDSRATEPVTAAEVNIASDGSVVGGPDEADVAGLIEEKKDEEGE
TAVASSTESSSCSPTGGDGGRKWKGLHVGVWLAIGAGVAVGAALWSRRR*