prot_Ecto-sp9_F_contig9939.18004.1 (polypeptide) Ectocarpus species9 EcSCA_722f female

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview


Name	mRNA_Ecto-sp9_F_contig9939.18004.1
Unique Name	prot_Ecto-sp9_F_contig9939.18004.1
Type	polypeptide
Organism	Ectocarpus species9 EcSCA_722f female (Ectocarpus species9 EcSCA_722f female)
Sequence length	356

Homology

[Close]

BLAST of mRNA_Ecto-sp9_F_contig9939.18004.1 vs.
Match: Kinesin (motor domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KQA5_9PHAE)

HSP 1 Score: 275 bits (704), Expect = 6.710e-80
Identity = 236/297 (79.46%), Postives = 240/297 (80.81%), Query Frame = 0

Query:   60 AGDIPHEGDPTSAPAAXXXXPKAGAKSNDNGEVASTXXXXXXXXXXXXNQDDRVRVLCRFRRTEERDGEERGSPRGKWLVFGGGXXXXXXXXXXHEGGEGAPLDTVSVRMGGAWSTRGFDRVLKPGVDQAQVYSDVKRVAHGVSQGFNGTIFAYGQTGSGKTYTMGSATATLSASPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSSPFAGMPEAAPKNSAPVPTAPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGGPGTGLHPIGTVPSSDAAGAVS 356
            AGDIPHEGDPTSAPAA    PKA AKSND+ EVA  XXXXXXXXX   NQDDRVRVLCRFRRT ERDGEERGSPRGKWLVFGGGXXXXXXXXX HEGGEGAPLDTVSVRMGGAWSTRGFDRVLKPGVDQAQVYSDVKRVAHGVSQGFNGTIFAYGQTG+GKTYTMG ATATLSA  XXXXXXXX          XXXXXX           XXXXXXX   SPFAG PEA P N APVP +PXXXXXXXXXXXXXXXXXXXXXX XXX       GPG  LHPIG +PSS AAGAVS
Sbjct:   81 AGDIPHEGDPTSAPAAADA-PKAEAKSNDSVEVAXXXXXXXXXXXTS-NQDDRVRVLCRFRRTVERDGEERGSPRGKWLVFGGGXXXXXXXXX-HEGGEGAPLDTVSVRMGGAWSTRGFDRVLKPGVDQAQVYSDVKRVAHGVSQGFNGTIFAYGQTGAGKTYTMGGATATLSAXXXXXXXXXXGVTTPSGGGAXXXXXXPCHPGSAGVLPXXXXXXX---SPFAGAPEATPTNLAPVPASPXXXXXXXXXXXXXXXXXXXXXXLXXXLPD----GPGRRLHPIGIMPSSHAAGAVS 367

[Close]

BLAST of mRNA_Ecto-sp9_F_contig9939.18004.1 vs.
Match: Kinesin (motor domain-containing protein (Fragment) n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LL93_ECTSI)

HSP 1 Score: 159 bits (401), Expect = 6.090e-44
Identity = 124/187 (66.31%), Postives = 126/187 (67.38%), Query Frame = 0

Query:  169 MGGAWSTRGFDRVLKPGVDQAQVYSDVKRVAHGVSQGFNGTIFAYGQTGSGKTYTMGSATATLSASPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSSPFAGMPEAAPKNSAPVPTAPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGGPGTGLHPIGTVPSSDAAGAV 355
            MGGAWS RGFDRVLKPGVDQAQVYSDVKRVAHGVSQGFNGTIFAYGQTGSGKTYTMG ATATLSASP       XXXXXXX      XXXXXXXXXXXX            SSPFAGMPEAAP NSAPVP +P              XXXXXX            GG  TGLHPI T+PSS A G V
Sbjct:    1 MGGAWSRRGFDRVLKPGVDQAQVYSDVKRVAHGVSQGFNGTIFAYGQTGSGKTYTMGGATATLSASPAAATPATXXXXXXXTPSGGNXXXXXXXXXXXXSAGVLPLPAPSPSSPFAGMPEAAPTNSAPVPASPGYSSSVSPSTLLMPXXXXXXLPLQPP------GGLRTGLHPIWTLPSSYALGVV 181

The following BLAST results are available for this feature:

BLAST of mRNA_Ecto-sp9_F_contig9939.18004.1 vs.

BLAST of mRNA_Ecto-sp9_F_contig9939.18004.1 vs.
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Ectocarpus species9 EcSCA_722f female vs UniRef90)
Total hits: 2


Match Name	E-value	Identity	Description
Kinesin	6.710e-80	79.46	motor domain-containing protein n=1 Tax=Ectocarpus...	[more]
Kinesin	6.090e-44	66.31	motor domain-containing protein (Fragment) n=1 Tax...	[more]

InterPro

Analysis Name: InterProScan on OGS1.0 of Ectocarpus species9 EcSCA_722f female
Date Performed: 2022-09-29


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR001752	Kinesin motor domain	PFAM	PF00225	Kinesin	coord: 177..227 e-value: 4.1E-15 score: 55.5
IPR001752	Kinesin motor domain	PROSITE	PS50067	KINESIN_MOTOR_2	coord: 112..225 score: 13.971
IPR036961	Kinesin motor domain superfamily	GENE3D	3.40.850.10		coord: 164..245 e-value: 5.2E-19 score: 70.4
IPR027640	Kinesin-like protein	PANTHER	PTHR24115	FAMILY NOT NAMED	coord: 177..231
None	No IPR available	PANTHER	PTHR24115:SF592	CENTROMERE-ASSOCIATED PROTEIN E	coord: 177..231
IPR027417	P-loop containing nucleoside triphosphate hydrolase	SUPERFAMILY	52540	P-loop containing nucleoside triphosphate hydrolases	coord: 110..230

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
Ecto-sp9_F_contig9939	contig	Ecto-sp9_F_contig9939:1438..3282 +

Analyses

This polypeptide is derived from or has results from the following analyses


Analysis Name	Date Performed
InterProScan on OGS1.0 of Ectocarpus species9 EcSCA_722f female	2022-09-29
Diamond blastp: OGS1.0 of Ectocarpus species9 EcSCA_722f female vs UniRef90	2022-09-16
OGS1.0 of Ectocarpus species9 EcSCA_722f female	2021-02-24

Relationships

This polypeptide derives from the following mRNA feature(s):


Feature Name	Unique Name	Species	Type	Position
mRNA_Ecto-sp9_F_contig9939.18004.1	mRNA_Ecto-sp9_F_contig9939.18004.1	Ectocarpus species9 EcSCA_722f female	mRNA	Ecto-sp9_F_contig9939 1438..3282 +

Sequences

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>prot_Ecto-sp9_F_contig9939.18004.1 ID=prot_Ecto-sp9_F_contig9939.18004.1|Name=mRNA_Ecto-sp9_F_contig9939.18004.1|organism=Ectocarpus species9 EcSCA_722f female|type=polypeptide|length=356bp
MVDIVASTAVAVTESSSSGSGGGGSSNVSSPSPLLPQPPLVPPPGPSPST
TPRTATAAAAGDIPHEGDPTSAPAAAAAAPKAGAKSNDNGEVASTNNNSR
GSSGSTNNQDDRVRVLCRFRRTEERDGEERGSPRGKWLVFGGGGGDGGGG
GGGHEGGEGAPLDTVSVRMGGAWSTRGFDRVLKPGVDQAQVYSDVKRVAH
GVSQGFNGTIFAYGQTGSGKTYTMGSATATLSASPAAATPATAAAAGVTT
PSGGDAGATAPSPCHAGSASVLPLPAPSPSSPFAGMPEAAPKNSAPVPTA
PPPPGSSSSVSPATLLMPPPPPPPLPPPPPPPPGGPGTGLHPIGTVPSSD
AAGAVS

Annotated Terms

The following terms have been associated with this polypeptide:

Vocabulary: **INTERPRO**
Term	Definition
IPR001752	Kinesin_motor_dom
IPR036961	Kinesin_motor_dom_sf
IPR027640	Kinesin-like_fam
IPR027417	P-loop_NTPase