prot_Ecto-sp9_F_contig9937.18003.1 (polypeptide) Ectocarpus species9 EcSCA_722f female

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp9_F_contig9937.18003.1
Unique Nameprot_Ecto-sp9_F_contig9937.18003.1
Typepolypeptide
OrganismEctocarpus species9 EcSCA_722f female (Ectocarpus species9 EcSCA_722f female)
Sequence length282
Homology
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BLAST of mRNA_Ecto-sp9_F_contig9937.18003.1 vs.
Match: Uncharacterized (protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FKA1_ECTSI)

HSP 1 Score: 312 bits (799), Expect = 1.660e-102
Identity = 198/291 (68.04%), Postives = 207/291 (71.13%), Query Frame = 0 
Query:    1 MDATVAVLAFVQVLSAPKPQHMTKAEKRVAVDVVGRLKTAIDAKDACDVPAVGLLSLSVKCAAINAALRSNKCCPAGAERLQELLSPLLAVWKTAKLVIRSSKEWVTPDHQAKAFNLIGLHLAECHKALLPIKTAVSA----DATNPSGTRNERFRCRVTPC-----TTERLHPVAVGFTTIRGMNLFFVSDRKSISFILSPLTVPTASAARQAALGAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLRSSPSPPPTPSLGARTSPLGSRRCQGGPRSPRRRRRRWCRR 282
            MDATVAVLA VQVLSAPKPQHMTK EKRVAVDVVGRLKTAIDAKDACDVPAVGLLSLSVKCAAINAALRSNKCCP GAERL+ELLSPLLA+WKTAK VIRSSKEWVTPDHQAKAFNLIGLHLAECHKALLPIKTA  A        PS    +R     T C     TT +   +     +    +     D+ S S +         SAA QAALGA    XXXXXXXXXXX                LR SPSPPPTPSLGARTSPLGSRRCQGGPRSP RRR  WCRR
Sbjct:   69 MDATVAVLASVQVLSAPKPQHMTKTEKRVAVDVVGRLKTAIDAKDACDVPAVGLLSLSVKCAAINAALRSNKCCPTGAERLRELLSPLLAMWKTAKFVIRSSKEWVTPDHQAKAFNLIGLHLAECHKALLPIKTAAGAAIFWPEVAPSKGLQDRTATFATLCQGKGETTAKQQQLEGQLASSSASSPLSSPDKSSKSKVFFAYPCHHRSAAHQAALGAAAPWXXXXXXXXXXXAHFRRPLLRRHHLHR-LRPSPSPPPTPSLGARTSPLGSRRCQGGPRSPTRRRPHWCRR 358
[Close]
BLAST of mRNA_Ecto-sp9_F_contig9937.18003.1 vs.
Match: Uncharacterized (protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FK84_ECTSI)

HSP 1 Score: 233 bits (593), Expect = 2.050e-70
Identity = 118/138 (85.51%), Postives = 126/138 (91.30%), Query Frame = 0 
Query:    1 MDATVAVLAFVQVLSAPKPQHMTKAEKRVAVDVVGRLKTAIDAKDACDVPAVGLLSLSVKCAAINAALRSNKCCPAGAERLQELLSPLLAVWKTAKLVIRSSKEWVTPDHQAKAFNLIGLHLAECHKALLPIKTAVSA 138
            MDAT A+LA  Q +SAPKPQHMTKAEKRV V +VGRLKTAIDAKDACDVPAVGLL+LSVKCAAINAALRSNKCCPAGAERL+ELLSPLLA+WKTAK VIR SKEWVTPDHQA+AFNLIGLHLAEC+KAL P KTA  A
Sbjct:   69 MDATDAILASAQAVSAPKPQHMTKAEKRVTVIIVGRLKTAIDAKDACDVPAVGLLTLSVKCAAINAALRSNKCCPAGAERLRELLSPLLAMWKTAKFVIRGSKEWVTPDHQAEAFNLIGLHLAECYKALKPTKTAAGA 206
[Close]
BLAST of mRNA_Ecto-sp9_F_contig9937.18003.1 vs.
Match: Uncharacterized (protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LM82_ECTSI)

HSP 1 Score: 113 bits (283), Expect = 1.550e-25
Identity = 63/135 (46.67%), Postives = 85/135 (62.96%), Query Frame = 0 
Query:   21 HMTKAEKRVAVDVVGRLKTAIDAKDACDVPAVGLLSLSVKCAAINAAL-RSNKCCPAGAERLQELLSPLLAVWKTAKLVIRSSKEWVTPDHQAKAFNLIGLHLAECHKALLPIKTAVSADATNPSGTRNERFRCR 154
             ++KA + +A ++VGRL+TAI+  DACD+PA GLL +S KCAA+ A L  S+K CP   +RL ELLS L ++W   K VIR+S EWV+   Q +A +L GLHLA  H  L  IK + S  +  P    NE  + R
Sbjct:   74 RISKAGRSIAANIVGRLRTAIETGDACDMPAAGLLDMSGKCAAMKARLGSSSKRCPTEVQRLTELLSSLFSMWANIKSVIRNSNEWVSLTDQKEAMDLFGLHLAHSHALLRNIKNSTSTASFWPEVETNEALQTR 208
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp9_F_contig9937.18003.1 vs.
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Ectocarpus species9 EcSCA_722f female vs UniRef90)
Total hits: 3
Match NameE-valueIdentityDescription
Uncharacterized1.660e-10268.04protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 ... [more]
Uncharacterized2.050e-7085.51protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 ... [more]
Uncharacterized1.550e-2546.67protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 ... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0 of Ectocarpus species9 EcSCA_722f female
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_N_REGIONSignal peptide N-regioncoord: 1..2
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_H_REGIONSignal peptide H-regioncoord: 3..11
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 16..282
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_C_REGIONSignal peptide C-regioncoord: 12..15
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDESignal Peptidecoord: 1..15

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp9_F_contig9937contigEcto-sp9_F_contig9937:957..2669 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Ectocarpus species9 EcSCA_722f female2022-09-29
Diamond blastp: OGS1.0 of Ectocarpus species9 EcSCA_722f female vs UniRef902022-09-16
OGS1.0 of Ectocarpus species9 EcSCA_722f female2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp9_F_contig9937.18003.1mRNA_Ecto-sp9_F_contig9937.18003.1Ectocarpus species9 EcSCA_722f femalemRNAEcto-sp9_F_contig9937 228..2669 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp9_F_contig9937.18003.1 ID=prot_Ecto-sp9_F_contig9937.18003.1|Name=mRNA_Ecto-sp9_F_contig9937.18003.1|organism=Ectocarpus species9 EcSCA_722f female|type=polypeptide|length=282bp
MDATVAVLAFVQVLSAPKPQHMTKAEKRVAVDVVGRLKTAIDAKDACDVP
AVGLLSLSVKCAAINAALRSNKCCPAGAERLQELLSPLLAVWKTAKLVIR
SSKEWVTPDHQAKAFNLIGLHLAECHKALLPIKTAVSADATNPSGTRNER
FRCRVTPCTTERLHPVAVGFTTIRGMNLFFVSDRKSISFILSPLTVPTAS
AARQAALGAAASRPPRTTTTTTTPPAHFRRPLLRRRHLHHLRSSPSPPPT
PSLGARTSPLGSRRCQGGPRSPRRRRRRWCRR
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