prot_Ecto-sp9_F_contig9914.17983.1 (polypeptide) Ectocarpus species9 EcSCA_722f female

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp9_F_contig9914.17983.1
Unique Nameprot_Ecto-sp9_F_contig9914.17983.1
Typepolypeptide
OrganismEctocarpus species9 EcSCA_722f female (Ectocarpus species9 EcSCA_722f female)
Sequence length155
Homology
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BLAST of mRNA_Ecto-sp9_F_contig9914.17983.1 vs.
Match: Importin (N-terminal domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FX52_ECTSI)

HSP 1 Score: 292 bits (747), Expect = 2.880e-91
Identity = 153/154 (99.35%), Postives = 153/154 (99.35%), Query Frame = 0 
Query:    1 MAVRLVSNFKLSTLGQLDSFAAFAQHLAALSSRMLHESKALAGRDDDEDVGWRRETFALLLEAWVAMAEDFEVTGEENQGMRKGMQDATFPLYEQYLEHELTVSRVEAEASVGHEEDDEEEEIGAADKDEQMCSAACLGRLSLARALAAVDVQV 154
            MAVRLVSNFKLSTLGQLDSFAAFAQHLAALSSRMLHESKALAGRDDDEDVGWRRETFALLLEAWVAMAEDFEVTG ENQGMRKGMQDATFPLYEQYLEHELTVSRVEAEASVGHEEDDEEEEIGAADKDEQMCSAACLGRLSLARALAAVDVQV
Sbjct:  365 MAVRLVSNFKLSTLGQLDSFAAFAQHLAALSSRMLHESKALAGRDDDEDVGWRRETFALLLEAWVAMAEDFEVTGGENQGMRKGMQDATFPLYEQYLEHELTVSRVEAEASVGHEEDDEEEEIGAADKDEQMCSAACLGRLSLARALAAVDVQV 518
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BLAST of mRNA_Ecto-sp9_F_contig9914.17983.1 vs.
Match: Importin (N-terminal domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K5P3_9PHAE)

HSP 1 Score: 287 bits (735), Expect = 5.420e-91
Identity = 150/154 (97.40%), Postives = 152/154 (98.70%), Query Frame = 0 
Query:    1 MAVRLVSNFKLSTLGQLDSFAAFAQHLAALSSRMLHESKALAGRDDDEDVGWRRETFALLLEAWVAMAEDFEVTGEENQGMRKGMQDATFPLYEQYLEHELTVSRVEAEASVGHEEDDEEEEIGAADKDEQMCSAACLGRLSLARALAAVDVQV 154
            MAVRLVSNFKLSTLGQLDSFAAFAQHLAALSSRMLHESKALAGRDDDEDVGWRRETFALLLE+WVAMAEDFEVT  ENQGMRKGMQDATFPLYEQYLEHELTVSRVEAEASVGHEEDDEEEEIGAADKDEQMCSAACLGRLSLAR+LAAVDVQV
Sbjct:  365 MAVRLVSNFKLSTLGQLDSFAAFAQHLAALSSRMLHESKALAGRDDDEDVGWRRETFALLLESWVAMAEDFEVTSGENQGMRKGMQDATFPLYEQYLEHELTVSRVEAEASVGHEEDDEEEEIGAADKDEQMCSAACLGRLSLARSLAAVDVQV 518
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BLAST of mRNA_Ecto-sp9_F_contig9914.17983.1 vs.
Match: CRM1_C (domain-containing protein n=1 Tax=Thalassiosira pseudonana TaxID=35128 RepID=B8BYG7_THAPS)

HSP 1 Score: 56.2 bits (134), Expect = 3.010e-6
Identity = 49/152 (32.24%), Postives = 78/152 (51.32%), Query Frame = 0 
Query:    4 RLVSNFKLSTLGQLDSFAAFAQHLAALSSRMLHES----KALAGRDDD-EDVGWRRETFALLLEAWVAMAEDFEVT----GEENQGMRKGMQDATFPLYEQYLEHELTVSRVEAEASVGHEE---DDEEEEIGAADKDEQMCSAACLGRLSL 143
            RL SNF++ TL Q+ SF  F   L A+ + +L  S    + L G  +  E + WR +  A +L+   A+A+D+ +     G++     + +     PLY  Y    + +S +E +  +  EE   DD  EEI A   +E+M SAA LGRL++
Sbjct:  856 RLASNFRIQTLSQISSFPRFLSALCAIGTWILETSLMQCQQLNGDVEAMEGMDWRNDAIAQILQCSDALADDYWIVSGTGGDKATHASQLLATMLAPLYGPYCVCRVQMSSLE-DYFISREEAELDDIREEISALGLEEEMNSAASLGRLNV 1006
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp9_F_contig9914.17983.1 vs.
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Ectocarpus species9 EcSCA_722f female vs UniRef90)
Total hits: 3
Match NameE-valueIdentityDescription
Importin2.880e-9199.35N-terminal domain-containing protein n=1 Tax=Ectoc... [more]
Importin5.420e-9197.40N-terminal domain-containing protein n=1 Tax=Ectoc... [more]
CRM1_C3.010e-632.24domain-containing protein n=1 Tax=Thalassiosira ps... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0 of Ectocarpus species9 EcSCA_722f female
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePANTHERPTHR12596EXPORTIN 4,7-RELATEDcoord: 15..146
NoneNo IPR availablePANTHERPTHR12596:SF1EXPORTIN-4coord: 15..146

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp9_F_contig9914contigEcto-sp9_F_contig9914:3366..4877 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Ectocarpus species9 EcSCA_722f female2022-09-29
Diamond blastp: OGS1.0 of Ectocarpus species9 EcSCA_722f female vs UniRef902022-09-16
OGS1.0 of Ectocarpus species9 EcSCA_722f female2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp9_F_contig9914.17983.1mRNA_Ecto-sp9_F_contig9914.17983.1Ectocarpus species9 EcSCA_722f femalemRNAEcto-sp9_F_contig9914 3366..4883 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp9_F_contig9914.17983.1 ID=prot_Ecto-sp9_F_contig9914.17983.1|Name=mRNA_Ecto-sp9_F_contig9914.17983.1|organism=Ectocarpus species9 EcSCA_722f female|type=polypeptide|length=155bp
MAVRLVSNFKLSTLGQLDSFAAFAQHLAALSSRMLHESKALAGRDDDEDV
GWRRETFALLLEAWVAMAEDFEVTGEENQGMRKGMQDATFPLYEQYLEHE
LTVSRVEAEASVGHEEDDEEEEIGAADKDEQMCSAACLGRLSLARALAAV
DVQV*
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