prot_Ecto-sp9_F_contig9912.17982.1 (polypeptide) Ectocarpus species9 EcSCA_722f female

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp9_F_contig9912.17982.1
Unique Nameprot_Ecto-sp9_F_contig9912.17982.1
Typepolypeptide
OrganismEctocarpus species9 EcSCA_722f female (Ectocarpus species9 EcSCA_722f female)
Sequence length239
Homology
BLAST of mRNA_Ecto-sp9_F_contig9912.17982.1 vs.
Match: LNS2 (domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L2R2_9PHAE)

HSP 1 Score: 456 bits (1173), Expect = 1.530e-155
Identity = 230/233 (98.71%), Postives = 231/233 (99.14%), Query Frame = 0
Query:    1 LYLRVQEDGFCTFADGRLQPALEALAMLAKDDTLVDGFNTVRFEIRYLRDSRVLVAECFAFVWDVNTPMIVVDIDGTITRSDVSGLMMTLSPGLVTDHTHEGICSLLARMVDEAGAQVVYLTSRPISLAAKTRTFLASTEQEGKKLPLGPLQCCLEKVSGVLWRELVSKNMHDYKITALLDLARPFREAGRTFGEAVFAAGIGNRVHDAVAYRAAGIPKDFIFLIDTESNLRV 233
            LYLRVQEDGFCTFADGRLQPALEALAMLAKDDTLVDGFNTVRFEIRYLRD RVLVAECFAFVWDVNTPMIVVDIDGTITRSDVSGLMMTLSPGLVT+H HEGICSLLARMVDEAGAQVVYLTSRPISLAAKTRTFLASTEQEGKKLPLGPLQCCLEKVSGVLWRELVSKNMHDYKITALLDLARPFREAGRTFGEAVFAAGIGNRVHDAVAYRAAGIPKDFIFLIDTESNLRV
Sbjct:  107 LYLRVQEDGFCTFADGRLQPALEALAMLAKDDTLVDGFNTVRFEIRYLRDPRVLVAECFAFVWDVNTPMIVVDIDGTITRSDVSGLMMTLSPGLVTNHNHEGICSLLARMVDEAGAQVVYLTSRPISLAAKTRTFLASTEQEGKKLPLGPLQCCLEKVSGVLWRELVSKNMHDYKITALLDLARPFREAGRTFGEAVFAAGIGNRVHDAVAYRAAGIPKDFIFLIDTESNLRV 339          
BLAST of mRNA_Ecto-sp9_F_contig9912.17982.1 vs.
Match: LNS2 (domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LKT7_ECTSI)

HSP 1 Score: 405 bits (1041), Expect = 7.700e-138
Identity = 204/207 (98.55%), Postives = 206/207 (99.52%), Query Frame = 0
Query:   27 MLAKDDTLVDGFNTVRFEIRYLRDSRVLVAECFAFVWDVNTPMIVVDIDGTITRSDVSGLMMTLSPGLVTDHTHEGICSLLARMVDEAGAQVVYLTSRPISLAAKTRTFLASTEQEGKKLPLGPLQCCLEKVSGVLWRELVSKNMHDYKITALLDLARPFREAGRTFGEAVFAAGIGNRVHDAVAYRAAGIPKDFIFLIDTESNLRV 233
            MLAKDDTLVDGFNTVRFEIRYLRD RVLVAECFAFVWDVNTPMIVVDIDGTITRSDVSGLMMTLSPGLVT+HTHEGICSLLARMVDEAGAQVVYLTSRPISLAAKTRTFLASTEQEGK+LPLGPLQCCLEKVSGVLWRELVSKNMHDYKITALLDLARPFREAGRTFGEAVFAAGIGNRVHDAVAYRAAGIPKDFIFLIDTESNLRV
Sbjct:    1 MLAKDDTLVDGFNTVRFEIRYLRDPRVLVAECFAFVWDVNTPMIVVDIDGTITRSDVSGLMMTLSPGLVTNHTHEGICSLLARMVDEAGAQVVYLTSRPISLAAKTRTFLASTEQEGKRLPLGPLQCCLEKVSGVLWRELVSKNMHDYKITALLDLARPFREAGRTFGEAVFAAGIGNRVHDAVAYRAAGIPKDFIFLIDTESNLRV 207          
BLAST of mRNA_Ecto-sp9_F_contig9912.17982.1 vs.
Match: LNS2 (domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836C9R7_9STRA)

HSP 1 Score: 165 bits (418), Expect = 4.260e-43
Identity = 103/270 (38.15%), Postives = 141/270 (52.22%), Query Frame = 0
Query:   45 IRYLRDSRVLVAECFAFVWDVNTPMIVVDIDGTITRSDVSGLMMTLSPGLVTDHTHEGICSLLARMVDEAGAQVVYLTSRPISLAAKTRTFLASTEQEGKKLPLGPLQCCLEKV------------------------------------------------------------SGVLWRELVSKNMHDYKITAL---------------------LDLARPFREAGRTFGEAVFAAGIGNRVHDAVAYRAAGIPKDFIFLIDTESNLRV 233
            +R+  D RVLVAECFAF +D    ++V+DIDGTIT+SDV GL+MT SPG+ TDH   GICSLL  M +E GA ++YLTSRP+ LA +TR FL    Q+G  LPLGPL  C  KV                                                            + V++RE+++K+MH++K +AL                      ++A  F  AGR   + V+AAGIGNR  DA AY+AAG+P+DFI +ID+ +N+++
Sbjct:  702 VRFRGDPRVLVAECFAFAFDARDRLLVMDIDGTITKSDVQGLIMTFSPGM-TDHLQPGICSLLHHMSNE-GAHILYLTSRPVVLAKRTRAFLMDLRQDGLLLPLGPLLTCKSKVRSAAAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRAPSTLTDVVYREVIAKDMHEFKGSALQASLISALSAKNVTSGLQMLHAEVAEVFFRAGRPEDDPVYAAGIGNRETDAFAYQAAGVPEDFICIIDSSANIQI 969          
BLAST of mRNA_Ecto-sp9_F_contig9912.17982.1 vs.
Match: Hypothetical (protein (Fragment) n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3Y642_HETAK)

HSP 1 Score: 144 bits (362), Expect = 1.410e-37
Identity = 84/219 (38.36%), Postives = 132/219 (60.27%), Query Frame = 0
Query:   20 PALEALAMLAKDDTLVDGFNTVRFEIRY--LRDSRVLVAECFAFVWDVNTPMIVVDIDGTITRSDVSGLMMTLSPGLVTDHTHEGICSLLARMVDEAGAQVVYLTSRPISLAAKTRTFLASTEQEGKKLPLGPLQCCLEKVSGVLWRELVSKNMHDYKITALLDLARPFREAGRTFGEAVFAAGIGNRVHDAVAYRAAGIPKDFIFLIDTESNLRVRVW 236
            P  E LA+L     L+DG N +RFE+ +   +  R++ AE   FVWDV+  +++ DIDGTIT++DV G + T +    T+  H+GIC  L+ +V++ G  ++++TSRP+ L   T+TFL++  Q+G  +P GPL  C + +  V+++E+V+K +H YK   L  + R F  +GR   E +F  G GN+  DA AY    +   FIF+I  +S  R+ VW
Sbjct:  100 PTSEQLAVLG----LMDGKNNLRFELTFNDQKGMRLIHAETSCFVWDVDCRIVLCDIDGTITKTDVGGFVGTSTNPEDTNFVHDGICPFLSDLVED-GINIMFVTSRPMMLKQLTKTFLSTICQDGCFIPEGPLFNCPQNLLNVVFQEVVTKTIHRYKTGVLQAVMRLFELSGRENPEDLFRLGFGNKPTDAKAYEQVCVRSQFIFIIGKDS--RIVVW 311          
BLAST of mRNA_Ecto-sp9_F_contig9912.17982.1 vs.
Match: LNS2 (domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZF08_9STRA)

HSP 1 Score: 146 bits (368), Expect = 1.990e-36
Identity = 106/289 (36.68%), Postives = 141/289 (48.79%), Query Frame = 0
Query:   34 LVDGFNTVRFEIRYLRDSRVLVAECFAFVWDVNTP-MIVVDIDGTITRSDVSGLMMTLS------PGLVTDHTHEGICSLLARMVDEA--------------------------GAQVVYLTSRPISLAAKTRTFLASTEQEGKKLPLGPLQCCLEK-------------------------------------VSGVLWRELVSKNMHDYKITALLDLARPFREAGRTFGEAVFAAGIGNRVHDAVAYRAAG--------------IPKDFIFLIDTESNLRVRVWFV 238
            L+ G NT+RFE R   D RVLVA+C AF  D     ++VVDIDGTITRSD  GL+MTL       PG V DH   G+ SLL  +  E                           GAQ++YLT+RP+++A +TR FL    Q+G  LPLGPL   L K                                     ++ V++REL++++MH +K   L D+A  FR AGR     VFAAG+GNR+ DA+AY+ AG              IP +FI +ID ++   +R W V
Sbjct:  619 LLRGVNTLRFEARVRGDPRVLVADCLAFAMDAAAARVVVVDIDGTITRSDAHGLLMTLRLLMMLRPGTV-DHLQPGVYSLLHHVAAEEKKKRRXXXXXXXXXXXXXXXXXXXXXGAQLLYLTARPLAMAPRTRAFLVGATQDGLVLPLGPLVTNLCKXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXKARERGLTDVVYRELIARDMHRFKGQVLQDVAAVFRSAGRHARSRVFAAGVGNRLTDALAYQGAGGTPFRXXXXXXMAGIPDEFICIIDPKTA--IRTWSV 904          
BLAST of mRNA_Ecto-sp9_F_contig9912.17982.1 vs.
Match: Lipinlike (protein putative n=1 Tax=Albugo laibachii Nc14 TaxID=890382 RepID=F0WAE7_9STRA)

HSP 1 Score: 135 bits (341), Expect = 1.320e-33
Identity = 85/226 (37.61%), Postives = 119/226 (52.65%), Query Frame = 0
Query:    7 EDGFCTFADGRLQPALEALAMLAKDDTLVDGFNTVRFEIRYLRDSRVLVAECFAFVWDVNTPMIVVDIDGTITRSDVSGLMMTLSPGLVTDHTHEGICSLLARMVDEAGAQVVYLTSRPISLAAKTRTFLASTEQEGKKLPLGPLQCCLEKVSGVLWRELVSKNMHDYKITALLDLARPFREAGRTFGEAVFAAGIGNRVHDAVAYRAAGIPKDFIFLIDTESNLR 232
            E G C F  G L P ++ALA +   +   D  N VRFE        +   EC  +VW     +I+VD+DGT+T SDV G + TL  G   D  H G C    ++  E   +V+YLT+RP+  A+ +R  L +  Q    LP GPL      ++G L  E+V+KN H +K   L ++      AGR     +F AG GNR  D +AY+ AGI  D IFLID+ S+++
Sbjct:  179 ERGRCVFQSGSLTPPIDALANV---ELYEDNANYVRFEHYQRSTCCIRYVECRLYVWHPEESVIIVDLDGTLTVSDVEGHIRTLRLGQY-DFLHRGTCQFFTKL-HELQMRVLYLTARPLDWASASRNHLENAIQLKHVLPPGPLITNSNGLTGALLTEVVNKNPHIFKRQVLQEIQLCLIHAGRVTEHPIFVAGFGNRSSDVLAYKDAGIELDMIFLIDSTSSIK 399          
BLAST of mRNA_Ecto-sp9_F_contig9912.17982.1 vs.
Match: Phosphatidate (phosphatase LPIN3 n=1 Tax=Hondaea fermentalgiana TaxID=2315210 RepID=A0A2R5G6Z4_9STRA)

HSP 1 Score: 129 bits (324), Expect = 4.880e-32
Identity = 85/246 (34.55%), Postives = 130/246 (52.85%), Query Frame = 0
Query:    3 LRVQEDGFCTFADGRLQPALEALAMLAKDDTLVD--GFNTVRFEIRYLRDS--RVLVAECFAFVWDVNTPMIVVDIDGTITRSDVSGLM---MTLSPGLVTDHTHEGICSLLARMVDEAGAQVVYLTSRPISLAAKTRTFLASTEQEG-------KKLPLGPLQCCLEKVSGVLWRELVSKNMHDYKITALLDLARPFREAGRTFGE-AVFAAGIGNRVHDAVAYRAAGIPKDFIFLIDTESNLRV 233
            + + + G   F  G+L P  E L  +    +L+D  G + ++FE RY  +   R+   E   ++WD +  ++V DIDGTITRSDV G++   +    G    H H G+C L   ++DE  A ++YLT+RP++L   TR+++   EQ         ++LP GP+      ++    RE+V ++ H +K   L  L   F  AGR      VF A  GN+  DAVAYRA G P   IF+I T+S ++V
Sbjct:   75 MEIGDGGKAQFPSGKLAPDPEVLGNVT---SLLDELGPHKLKFEHRYTANGEYRLNYVEALFWLWDSSDSIVVSDIDGTITRSDVGGMINGVLGARMGWKKGHAHPGVCFLYNHLIDETNAHIMYLTARPLNLINDTRSYIYELEQPVSSSSMTMRQLPPGPIITDTTNLTSSFRREVVDRSSHVFKTEMLSQLRDCFTNAGRDIRRYPVFLATFGNKDTDAVAYRAVGAPPVTIFIIGTDSRVQV 317          
BLAST of mRNA_Ecto-sp9_F_contig9912.17982.1 vs.
Match: Lipin (n=1 Tax=Phytophthora megakarya TaxID=4795 RepID=A0A225WXZ7_9STRA)

HSP 1 Score: 131 bits (330), Expect = 6.730e-32
Identity = 86/230 (37.39%), Postives = 118/230 (51.30%), Query Frame = 0
Query:    3 LRVQEDGFCTFADGRLQPALEALAMLAKDDTLVDGFNTVRFEIRYLRDSRVLVAECFAFVWDVNTPMIVVDIDGTITRSDVSGLMMTLSPGLVTDHTHEGICSLLARMVDEAGAQVVYLTSRPISLAAKTRTFLASTEQEGKKLPLGPLQCCLEKVSGVLWRELVSKNMHDYKITALLDLARPFREAGRTFGEAVFAAGIGNRVHDAVAYRAAGIPKDFIFLIDTESNLR 232
            + +QE G CTF  G +    E L      D   +  N VRFE      + V   +    +W  N   +VVD+DGT+T SDV G + TL  G   D  H G C    ++  E G ++VYLT+RP+  A+ +RT L + EQ+  KLP G L      ++G L+ E+V+K  H +KI  L +L      AGR     VF AG GNR  D VAY   GI    IF++D  SN++
Sbjct:  201 MELQERGRCTFITGGIMIPPEDLLFA---DLSEEYPNLVRFEHYQKYTNTVRYVDTKLHLWGPNESAVVVDLDGTLTISDVEGHIRTLRLGQY-DFLHAGACDFFTKL-HELGLRIVYLTARPLDWASASRTHLENAEQQSIKLPPGVLITNSTGLTGALFTEVVNKTPHLFKIQVLNELQLTLIHAGRVTEHPVFVAGFGNRPTDIVAYEEVGIDPSLIFMLDPYSNVK 425          
BLAST of mRNA_Ecto-sp9_F_contig9912.17982.1 vs.
Match: Protein (involved in plasmid maintenance/nuclear protein involved in lipid metabolism n=1 Tax=Plasmopara halstedii TaxID=4781 RepID=A0A0P1A5S1_PLAHL)

HSP 1 Score: 130 bits (328), Expect = 1.600e-31
Identity = 85/230 (36.96%), Postives = 119/230 (51.74%), Query Frame = 0
Query:    3 LRVQEDGFCTFADGRLQPALEALAMLAKDDTLVDGFNTVRFEIRYLRDSRVLVAECFAFVWDVNTPMIVVDIDGTITRSDVSGLMMTLSPGLVTDHTHEGICSLLARMVDEAGAQVVYLTSRPISLAAKTRTFLASTEQEGKKLPLGPLQCCLEKVSGVLWRELVSKNMHDYKITALLDLARPFREAGRTFGEAVFAAGIGNRVHDAVAYRAAGIPKDFIFLIDTESNLR 232
            + +QE G CTF  G L    E L      D   +  N VRFE      + V   +    +W  N  ++VVD+DGT+T SDV G + TL  G   D  H G C    ++  E G ++VYLT+RP+  A+ +RT L + EQ+   LP G L      ++G L+ E+V+K  H +KI  L +L      AGR     VF AG GNR  D VAY+  G+    IF++D  SN++
Sbjct:  225 MELQERGRCTFVTGGLVIPPEDLCFA---DLTENRPNLVRFEHYQKYTNTVRYVDTKLHLWGPNESVVVVDLDGTLTISDVEGHIRTLRLGQY-DFLHAGACDFFTKL-HELGMRIVYLTARPLDWASASRTHLENAEQQSISLPPGVLITNSTGLTGALFTEVVNKTPHLFKIQVLNELQLTLIHAGRVTEHPVFVAGFGNRPTDIVAYQEVGMDPSLIFMLDPYSNVK 449          
BLAST of mRNA_Ecto-sp9_F_contig9912.17982.1 vs.
Match: Uncharacterized (protein n=1 Tax=Pythium oligandrum TaxID=41045 RepID=A0A8K1C2A8_PYTOL)

HSP 1 Score: 130 bits (327), Expect = 1.610e-31
Identity = 85/230 (36.96%), Postives = 115/230 (50.00%), Query Frame = 0
Query:    3 LRVQEDGFCTFADGRLQPALEALAMLAKDDTLVDGFNTVRFEIRYLRDSRVLVAECFAFVWDVNTPMIVVDIDGTITRSDVSGLMMTLSPGLVTDHTHEGICSLLARMVDEAGAQVVYLTSRPISLAAKTRTFLASTEQEGKKLPLGPLQCCLEKVSGVLWRELVSKNMHDYKITALLDLARPFREAGRTFGEAVFAAGIGNRVHDAVAYRAAGIPKDFIFLIDTESNLR 232
            +++ E G CTF  G L P    L    K D   D  N VRFE        +   E    +W  N  ++V D+DGT+T SDV G + TL  G   D  H G C    ++  E   +++YLT+RP+  A+ +RT L + +Q+   LP G L      ++G L  E+V+KN H +K   L ++      AGR     VF AG GNR  D VAY   GI    IFLID  SNL+
Sbjct:  192 MQLLERGRCTFVTGGLTPPKTDLL---KVDLFDDRPNLVRFEHFQRSSDTIRYVESRLHLWGPNESVVVADLDGTLTISDVEGHIRTLRLGQY-DFLHHGACDFFNKL-HELDMRIIYLTARPLDWASASRTHLENAKQQTHALPPGVLITNSNGLTGALMTEVVNKNPHVFKAQVLNEIQLTLIHAGRVVEHPVFVAGFGNRPTDVVAYEQVGIDPALIFLIDPYSNLK 416          
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp9_F_contig9912.17982.1 vs.
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Ectocarpus species9 EcSCA_722f female vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
LNS21.530e-15598.71domain-containing protein n=1 Tax=Ectocarpus sp. C... [more]
LNS27.700e-13898.55domain-containing protein n=1 Tax=Ectocarpus silic... [more]
LNS24.260e-4338.15domain-containing protein n=1 Tax=Tribonema minus ... [more]
Hypothetical1.410e-3738.36protein (Fragment) n=1 Tax=Heterosigma akashiwo Ta... [more]
LNS21.990e-3636.68domain-containing protein n=1 Tax=Tribonema minus ... [more]
Lipinlike1.320e-3337.61protein putative n=1 Tax=Albugo laibachii Nc14 Tax... [more]
Phosphatidate4.880e-3234.55phosphatase LPIN3 n=1 Tax=Hondaea fermentalgiana T... [more]
Lipin6.730e-3237.39n=1 Tax=Phytophthora megakarya TaxID=4795 RepID=A0... [more]
Protein1.600e-3136.96involved in plasmid maintenance/nuclear protein in... [more]
Uncharacterized1.610e-3136.96protein n=1 Tax=Pythium oligandrum TaxID=41045 Rep... [more]

Pages

back to top
InterPro
Analysis Name: InterProScan on OGS1.0 of Ectocarpus species9 EcSCA_722f female
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR031315LNS2/PITPSMARTSM00775lns2coord: 70..234
e-value: 3.0E-30
score: 116.5
IPR013209Lipin/Ned1/Smp2 (LNS2)PFAMPF08235LNS2coord: 33..233
e-value: 2.3E-43
score: 148.3
NoneNo IPR availablePANTHERPTHR12181:SF12GH19076Pcoord: 19..234
IPR026058LIPIN familyPANTHERPTHR12181LIPINcoord: 19..234
IPR036412HAD-like superfamilySUPERFAMILY56784HAD-likecoord: 68..218

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp9_F_contig9912contigEcto-sp9_F_contig9912:423..3140 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Ectocarpus species9 EcSCA_722f female2022-09-29
Diamond blastp: OGS1.0 of Ectocarpus species9 EcSCA_722f female vs UniRef902022-09-16
OGS1.0 of Ectocarpus species9 EcSCA_722f female2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp9_F_contig9912.17982.1mRNA_Ecto-sp9_F_contig9912.17982.1Ectocarpus species9 EcSCA_722f femalemRNAEcto-sp9_F_contig9912 423..3140 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp9_F_contig9912.17982.1 ID=prot_Ecto-sp9_F_contig9912.17982.1|Name=mRNA_Ecto-sp9_F_contig9912.17982.1|organism=Ectocarpus species9 EcSCA_722f female|type=polypeptide|length=239bp
LYLRVQEDGFCTFADGRLQPALEALAMLAKDDTLVDGFNTVRFEIRYLRD
SRVLVAECFAFVWDVNTPMIVVDIDGTITRSDVSGLMMTLSPGLVTDHTH
EGICSLLARMVDEAGAQVVYLTSRPISLAAKTRTFLASTEQEGKKLPLGP
LQCCLEKVSGVLWRELVSKNMHDYKITALLDLARPFREAGRTFGEAVFAA
GIGNRVHDAVAYRAAGIPKDFIFLIDTESNLRVRVWFV*
back to top
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR031315LNS2/PITP
IPR013209LNS2
IPR026058LIPIN
IPR036412HAD-like_sf