prot_Ecto-sp9_F_contig984.17923.1 (polypeptide) Ectocarpus species9 EcSCA_722f female

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp9_F_contig984.17923.1
Unique Nameprot_Ecto-sp9_F_contig984.17923.1
Typepolypeptide
OrganismEctocarpus species9 EcSCA_722f female (Ectocarpus species9 EcSCA_722f female)
Sequence length590
Homology
BLAST of mRNA_Ecto-sp9_F_contig984.17923.1 vs.
Match: Uncharacterized (protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JA29_9PHAE)

HSP 1 Score: 469 bits (1206), Expect = 5.200e-157
Identity = 355/671 (52.91%), Postives = 371/671 (55.29%), Query Frame = 0
Query:    1 MTSGVKRATRNSGIAVDVNLWDLRDLPKTSTVKRA-------------------PKLKLKDYTVRLPRASRDQDMKLLRRAARDNEGVGESDPVYPLTGPACITRKEAAAALLALGVERDDAMVAA-KAAVSESGDCGAGARSTIAD--RSIPLAMGINQPLLAEAEAGARLASPGANRNLTTEDQQSSLPHPAQLYHAQGKPDPIDDATGAMSAAAKISPARAGDVAG-------------------------------------------------------SXXXXXXXXXXXXXXXXXXXXXGPRFEPKHGVGGSTSSNRYKHVVGDGDVGGDSSMVDRLGKVGCVWGSSTGHHGRGGDGGGKAGAGCYXXXXXXXXXXXXXXXXXXXXSRGYSGGYSGVTTSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRSGGHVRYSGALHHKKSRPDEGKGCDGSSSAXXXXXPSRDSCLGKQKRENSNDDGGGGADVISKRAKTGDRYCSYSGSXXXXXXXXXXXXXXXXXVTTSDGKDSXXXXXXGISGXXXXXXXXXXXXXXXXXXXGIAWDN----TGGCDVSLSELSPPSPSRESSSFGKRXXXXXXXXXXXXXXXXMVDGSGCVDVNKASGDDGASERCAKRARQAAGG-QSRQLRGSRDRSGK 589
            M SGVKRATRNSGIAVDVNLWDLRDLPKTSTVK A                   PKLKLKDYTVRLPRASRDQDMKLLRRAARDNEGVG SDPVYPLTGPACITRKEAAAALLALG ERDD MVA  +AA SESGDCGAGA STIAD   SIPLAMGI+QPLLAEAEA ARLASPG +RNLTTEDQ+SSLPHPAQL  AQGKPD  DD TGAMSAAAKI+PARAGDVAG                                                        XXXXXXX              G RF+P+HGVGGSTSSN+YKHV+GDGDVGGDSSMVDRLGK+ CVWGSSTGHHG+GGDGGGKAG GCYXXXXXXXXXXXXXXXXXXXX RGYSGGYSGVTTS                                            +  S   +G G  G                                                                                                          GIAWDN    TG C+VS SELSP SP  +SSSFGKR                MVDGSGCVDVN ASGDDG SERCAKRARQAAGG +S QLRG RDRSGK
Sbjct:    1 MASGVKRATRNSGIAVDVNLWDLRDLPKTSTVKSAATMNNSPDPPSPRSTTHAAPKLKLKDYTVRLPRASRDQDMKLLRRAARDNEGVGGSDPVYPLTGPACITRKEAAAALLALGEERDDEMVAXXRAAASESGDCGAGAGSTIADGESSIPLAMGISQPLLAEAEADARLASPGVSRNLTTEDQRSSLPHPAQLDLAQGKPDSSDDTTGAMSAAAKIAPARAGDVAGLAAAAVAKVLSRGAAEGKPVLKRIFATVVAYDIGNSMEVAGGGGKGCGXXXXXXXXXXXXXXXAFDGVAGGGIGGGQGRRFQPEHGVGGSTSSNKYKHVIGDGDVGGDSSMVDRLGKIACVWGSSTGHHGQGGDGGGKAGPGCYXXXXXXXXXXXXXXXXXXXXXRGYSGGYSGVTTSDD------------------------------------------NDSSXXXDGNGTGG----------------------------------------------------------------------------------------------------------GIAWDNATDNTGECNVSPSELSPLSPFHDSSSFGKRNRGHDDDDNDD-----MVDGSGCVDVNTASGDDGVSERCAKRARQAAGGGKSLQLRGLRDRSGK 518          
BLAST of mRNA_Ecto-sp9_F_contig984.17923.1 vs.
Match: Uncharacterized (protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G074_ECTSI)

HSP 1 Score: 359 bits (921), Expect = 6.020e-116
Identity = 235/327 (71.87%), Postives = 243/327 (74.31%), Query Frame = 0
Query:    1 MTSGVKRATRNSGIAVDVNLWDLRDLPKTSTVKRAPKLKLKDYTVRLPRASRDQDMKLLRRAARDNEGVGESDPVYPLTGPACITRKEAAAALLALGVERDDAMVAA-KAAVSESGDCGAGARSTIADRSIPLAMGINQPLLAEAEAGARLASPGANRNLTTEDQQSSLPHPAQLYHAQGKPDPIDDATGAMSAAAKISPARAGDVA--------------------------------------------------GSXXXXXXXXXXXXXXXXXXXXX---GPRFEPKHGVGGSTSSNRYKHVVGDGDVGGDSSMVDRLGKVGCV 273
            MTSGVKRATRNSGI +DVNLWDLRDLPKTSTVKRAPKL LKDYTVRLPRASRDQDMKLLRR ARD EGVGESDPVYPLTGPACITRKEAAAALLALG ERDDAMVAA KAAVSESGDCGAGARSTIAD SIPLAMGINQPLLAEAEA ARLASPG +R+LTTEDQ+SSLPHPAQLYHAQGKPD  DDATGAMSAAAKI+PARAGDVA                                                  GS  XXXXXXXXXXXXXXXXXXX   GPRFEP+HGVGGSTSSNRY           D+   D +   GCV
Sbjct:   25 MTSGVKRATRNSGIGIDVNLWDLRDLPKTSTVKRAPKLNLKDYTVRLPRASRDQDMKLLRRTARDIEGVGESDPVYPLTGPACITRKEAAAALLALGEERDDAMVAAAKAAVSESGDCGAGARSTIADGSIPLAMGINQPLLAEAEADARLASPGVSRSLTTEDQRSSLPHPAQLYHAQGKPDSSDDATGAMSAAAKIAPARAGDVAELAAAAAAKVFSRGAAEGEPVLKRSLATAVANDIANSMEVAGGGGKRCDGGSSSXXXXXXXXXXXXXXXXXXXXXQGPRFEPEHGVGGSTSSNRYNSFGKRKRGHNDNDDDDTVDGSGCV 351          
BLAST of mRNA_Ecto-sp9_F_contig984.17923.1 vs.
Match: Uncharacterized (protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LE40_ECTSI)

HSP 1 Score: 293 bits (750), Expect = 1.940e-91
Identity = 161/176 (91.48%), Postives = 166/176 (94.32%), Query Frame = 0
Query:   33 KRAPKLKLKDYTVRLPRASRDQDMKLLRRAARDNEGVGESDPVYPLTGPACITRKEAAAALLALGVERDDAMVAA-KAAVSESGDCGAGARSTIADRSIPLAMGINQPLLAEAEAGARLASPGANRNLTTEDQQSSLPHPAQLYHAQGKPDPIDDATGAMSAAAKISPARAGDVAG 207
            ++ PKLKLKDYTVRLPRASRDQDMKLLRRAARD EGVGESDPVYPLTGPACITRKEAAAALLALG ERDDAMVAA KAAVSESGDCG GARSTIAD SIPLAMGINQPLLAEAEA ARLASPG +RNLTTEDQ+SSLPHPAQLYHAQGKPD  DDATGAMSAAAKI+PARAGDVAG
Sbjct:   28 RQPPKLKLKDYTVRLPRASRDQDMKLLRRAARDIEGVGESDPVYPLTGPACITRKEAAAALLALGEERDDAMVAAAKAAVSESGDCGEGARSTIADGSIPLAMGINQPLLAEAEADARLASPGVSRNLTTEDQRSSLPHPAQLYHAQGKPDSSDDATGAMSAAAKIAPARAGDVAG 203          
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp9_F_contig984.17923.1 vs.
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Ectocarpus species9 EcSCA_722f female vs UniRef90)
Total hits: 3
Match NameE-valueIdentityDescription
Uncharacterized5.200e-15752.91protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=... [more]
Uncharacterized6.020e-11671.87protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 ... [more]
Uncharacterized1.940e-9191.48protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 ... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp9_F_contig984contigEcto-sp9_F_contig984:578..3146 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Ectocarpus species9 EcSCA_722f female2022-09-29
Diamond blastp: OGS1.0 of Ectocarpus species9 EcSCA_722f female vs UniRef902022-09-16
OGS1.0 of Ectocarpus species9 EcSCA_722f female2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp9_F_contig984.17923.1mRNA_Ecto-sp9_F_contig984.17923.1Ectocarpus species9 EcSCA_722f femalemRNAEcto-sp9_F_contig984 566..3146 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp9_F_contig984.17923.1 ID=prot_Ecto-sp9_F_contig984.17923.1|Name=mRNA_Ecto-sp9_F_contig984.17923.1|organism=Ectocarpus species9 EcSCA_722f female|type=polypeptide|length=590bp
MTSGVKRATRNSGIAVDVNLWDLRDLPKTSTVKRAPKLKLKDYTVRLPRA
SRDQDMKLLRRAARDNEGVGESDPVYPLTGPACITRKEAAAALLALGVER
DDAMVAAKAAVSESGDCGAGARSTIADRSIPLAMGINQPLLAEAEAGARL
ASPGANRNLTTEDQQSSLPHPAQLYHAQGKPDPIDDATGAMSAAAKISPA
RAGDVAGSSGGSGGGGGDGVAGGGVGGGQGPRFEPKHGVGGSTSSNRYKH
VVGDGDVGGDSSMVDRLGKVGCVWGSSTGHHGRGGDGGGKAGAGCYGNGG
GASGDQAESDGAHTSGSRGYSGGYSGVTTSDDNDSSSGGDGNGFIMTSSS
SSSSSSSSSSSRSGGHVRYSGALHHKKSRPDEGKGCDGSSSASSPSSPSR
DSCLGKQKRENSNDDGGGGADVISKRAKTGDRYCSYSGSSGSSGSSGSSG
GSGSSGVTTSDGKDSSSGSSGGISGGGGGIISASSNSSSSSTGGGIAWDN
TGGCDVSLSELSPPSPSRESSSFGKRKRDHDDDDDDDDDDDDMVDGSGCV
DVNKASGDDGASERCAKRARQAAGGQSRQLRGSRDRSGK*
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