prot_Ecto-sp9_F_contig9827.17912.1 (polypeptide) Ectocarpus species9 EcSCA_722f female

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp9_F_contig9827.17912.1
Unique Nameprot_Ecto-sp9_F_contig9827.17912.1
Typepolypeptide
OrganismEctocarpus species9 EcSCA_722f female (Ectocarpus species9 EcSCA_722f female)
Sequence length247
Homology
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BLAST of mRNA_Ecto-sp9_F_contig9827.17912.1 vs.
Match: Uncharacterized (protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FLR2_ECTSI)

HSP 1 Score: 377 bits (969), Expect = 1.830e-129
Identity = 218/246 (88.62%), Postives = 221/246 (89.84%), Query Frame = 0 
Query:    1 GSGPLLPEWVSESLCNSCGGILTPGITCRIRVRHRSLASPSVKKAKAKTRVEKTNTKTNKCHNEVVTTCLTCGGINARGGTERQARDKKRRRRGGSRGRKQAVRDSGEGIEALKGKKRNRDAATLRGDYIPLGGGSLATPPTIPSRKRVAQTPSSSKRVGGSKSGNGDGDSGASKGVHHNRRGKSGGSGSGGDAISGYGDADVGGGEEGKGEAGVAPPALSLLERIRRDKKXXXXXXXXSAAATAE 246
            GSGPLLPEWVS+SLCNSCGGILTPGITCRIRVRHRSLASPSVKKAKAKTRVEKTNT  NKC NEVVTTCLTCGGIN RGGTERQARDKKRRRRGGSRGRKQAVRDSGEGIEALKGKKRNRDAATLRGDYIPLGGGSLATPPTIPSRKRVAQTPSS+KRVGGS+SGNGDGDSGASK VHHNRRGKS       DAIS         GEEGKGEAGVAPPALSLLERIRRDK XXXXX   SAAATAE
Sbjct:   83 GSGPLLPEWVSDSLCNSCGGILTPGITCRIRVRHRSLASPSVKKAKAKTRVEKTNT--NKCRNEVVTTCLTCGGINTRGGTERQARDKKRRRRGGSRGRKQAVRDSGEGIEALKGKKRNRDAATLRGDYIPLGGGSLATPPTIPSRKRVAQTPSSNKRVGGSESGNGDGDSGASKSVHHNRRGKSXXXXXXXDAISAS-------GEEGKGEAGVAPPALSLLERIRRDKXXXXXXDAASAAATAE 319
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp9_F_contig9827.17912.1 vs.
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Ectocarpus species9 EcSCA_722f female vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
Uncharacterized1.830e-12988.62protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FLR2... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0 of Ectocarpus species9 EcSCA_722f female
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableGENE3D2.20.25.200coord: 12..43
e-value: 4.2E-5
score: 25.1
IPR007175RNAse P, Rpr2/Rpp21 subunitPFAMPF04032Rpr2coord: 6..73
e-value: 5.1E-8
score: 33.1

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp9_F_contig9827contigEcto-sp9_F_contig9827:107..1761 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Ectocarpus species9 EcSCA_722f female2022-09-29
Diamond blastp: OGS1.0 of Ectocarpus species9 EcSCA_722f female vs UniRef902022-09-16
OGS1.0 of Ectocarpus species9 EcSCA_722f female2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp9_F_contig9827.17912.1mRNA_Ecto-sp9_F_contig9827.17912.1Ectocarpus species9 EcSCA_722f femalemRNAEcto-sp9_F_contig9827 107..1761 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp9_F_contig9827.17912.1 ID=prot_Ecto-sp9_F_contig9827.17912.1|Name=mRNA_Ecto-sp9_F_contig9827.17912.1|organism=Ectocarpus species9 EcSCA_722f female|type=polypeptide|length=247bp
GSGPLLPEWVSESLCNSCGGILTPGITCRIRVRHRSLASPSVKKAKAKTR
VEKTNTKTNKCHNEVVTTCLTCGGINARGGTERQARDKKRRRRGGSRGRK
QAVRDSGEGIEALKGKKRNRDAATLRGDYIPLGGGSLATPPTIPSRKRVA
QTPSSSKRVGGSKSGNGDGDSGASKGVHHNRRGKSGGSGSGGDAISGYGD
ADVGGGEEGKGEAGVAPPALSLLERIRRDKKKKRRHDAASAAATAE*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR007175Rpr2