prot_Ecto-sp9_F_contig979.17879.1 (polypeptide) Ectocarpus species9 EcSCA_722f female

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp9_F_contig979.17879.1
Unique Nameprot_Ecto-sp9_F_contig979.17879.1
Typepolypeptide
OrganismEctocarpus species9 EcSCA_722f female (Ectocarpus species9 EcSCA_722f female)
Sequence length130
Homology
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BLAST of mRNA_Ecto-sp9_F_contig979.17879.1 vs.
Match: THO (complex subunit 2 n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LD24_ECTSI)

HSP 1 Score: 245 bits (626), Expect = 7.840e-73
Identity = 128/130 (98.46%), Postives = 130/130 (100.00%), Query Frame = 0 
Query:    1 RGLLRLVGRFNKDSVPPVLGFKLAHYRNPSVAKYHRAAVRSAFKNKEIDAARYKVQIDKVTPRSLYVLIAVLLTTGTLNMDELLRHVSPGIATLAAKEKEYLADLETKIAKAGNKVPKLDADGNMDSAAA 130
            RGLLRLVGRFNKDSVPPVLGFKLAHYRNPSVAKYHRAA+RSAFKNKEIDAARYKVQIDKVTPRSLYVLIAVLLTTGTL+MDELLRHVSPGIATLAAKEKEYLADLETKIAKAGNKVPKLDADGNMDSAAA
Sbjct:  319 RGLLRLVGRFNKDSVPPVLGFKLAHYRNPSVAKYHRAAMRSAFKNKEIDAARYKVQIDKVTPRSLYVLIAVLLTTGTLSMDELLRHVSPGIATLAAKEKEYLADLETKIAKAGNKVPKLDADGNMDSAAA 448
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp9_F_contig979.17879.1 vs.
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Ectocarpus species9 EcSCA_722f female vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
THO7.840e-7398.46complex subunit 2 n=2 Tax=Ectocarpus TaxID=2879 Re... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp9_F_contig979contigEcto-sp9_F_contig979:25633..27680 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Ectocarpus species9 EcSCA_722f female2022-09-29
Diamond blastp: OGS1.0 of Ectocarpus species9 EcSCA_722f female vs UniRef902022-09-16
OGS1.0 of Ectocarpus species9 EcSCA_722f female2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp9_F_contig979.17879.1mRNA_Ecto-sp9_F_contig979.17879.1Ectocarpus species9 EcSCA_722f femalemRNAEcto-sp9_F_contig979 25633..27680 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp9_F_contig979.17879.1 ID=prot_Ecto-sp9_F_contig979.17879.1|Name=mRNA_Ecto-sp9_F_contig979.17879.1|organism=Ectocarpus species9 EcSCA_722f female|type=polypeptide|length=130bp
RGLLRLVGRFNKDSVPPVLGFKLAHYRNPSVAKYHRAAVRSAFKNKEIDA
ARYKVQIDKVTPRSLYVLIAVLLTTGTLNMDELLRHVSPGIATLAAKEKE
YLADLETKIAKAGNKVPKLDADGNMDSAAA
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