prot_Ecto-sp9_F_contig9789.17875.1 (polypeptide) Ectocarpus species9 EcSCA_722f female

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp9_F_contig9789.17875.1
Unique Nameprot_Ecto-sp9_F_contig9789.17875.1
Typepolypeptide
OrganismEctocarpus species9 EcSCA_722f female (Ectocarpus species9 EcSCA_722f female)
Sequence length181
Homology
[Close]
BLAST of mRNA_Ecto-sp9_F_contig9789.17875.1 vs.
Match: Uncharacterized (protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JU70_9PHAE)

HSP 1 Score: 288 bits (737), Expect = 1.240e-92
Identity = 163/182 (89.56%), Postives = 168/182 (92.31%), Query Frame = 0 
Query:    1 AVGATLAASPVAGRVLTAIRSVPQDVADDAVAVVSRQRAARKR-SGGLAGHHGQVATRGFRAARFSRHKMHRSSSSCSVTITANTRMQRLRSRVRHTQAASWYTLFGRRRRAEDRAEPAHGDDTRRAKQAGALGNGSGDETVTEGNTHDKSPEIAARRSRGGGEVHLNFKEALFAGAVSRSI 181
            AVGATLAASPVAGRVLTAIRS PQDVAD AVAVVS QRAARKR SGGLAGHHGQVATR FRAAR SR KM RSSSS SVTITANTR+QRLRSRVRHTQAASWY +FGRRRRAED  EPAHGDD+RRAKQAGALGN S DETVT+G+THDKSPEIAARRSRGGGEVHLNFKEALFAGAVSRSI
Sbjct:   39 AVGATLAASPVAGRVLTAIRSAPQDVADTAVAVVSWQRAARKRRSGGLAGHHGQVATRSFRAARCSRLKMQRSSSSSSVTITANTRVQRLRSRVRHTQAASWYRIFGRRRRAEDTVEPAHGDDSRRAKQAGALGNDSSDETVTKGDTHDKSPEIAARRSRGGGEVHLNFKEALFAGAVSRSI 220
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp9_F_contig9789.17875.1 vs.
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Ectocarpus species9 EcSCA_722f female vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
Uncharacterized1.240e-9289.56protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=... [more]
back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp9_F_contig9789contigEcto-sp9_F_contig9789:1267..2759 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Ectocarpus species9 EcSCA_722f female2022-09-29
Diamond blastp: OGS1.0 of Ectocarpus species9 EcSCA_722f female vs UniRef902022-09-16
OGS1.0 of Ectocarpus species9 EcSCA_722f female2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp9_F_contig9789.17875.1mRNA_Ecto-sp9_F_contig9789.17875.1Ectocarpus species9 EcSCA_722f femalemRNAEcto-sp9_F_contig9789 1267..2760 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp9_F_contig9789.17875.1 ID=prot_Ecto-sp9_F_contig9789.17875.1|Name=mRNA_Ecto-sp9_F_contig9789.17875.1|organism=Ectocarpus species9 EcSCA_722f female|type=polypeptide|length=181bp
AVGATLAASPVAGRVLTAIRSVPQDVADDAVAVVSRQRAARKRSGGLAGH
HGQVATRGFRAARFSRHKMHRSSSSCSVTITANTRMQRLRSRVRHTQAAS
WYTLFGRRRRAEDRAEPAHGDDTRRAKQAGALGNGSGDETVTEGNTHDKS
PEIAARRSRGGGEVHLNFKEALFAGAVSRSI
back to top