prot_Ecto-sp9_F_contig9774.17867.1 (polypeptide) Ectocarpus species9 EcSCA_722f female

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp9_F_contig9774.17867.1
Unique Nameprot_Ecto-sp9_F_contig9774.17867.1
Typepolypeptide
OrganismEctocarpus species9 EcSCA_722f female (Ectocarpus species9 EcSCA_722f female)
Sequence length317
Homology
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BLAST of mRNA_Ecto-sp9_F_contig9774.17867.1 vs.
Match: GLOBIN (domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JC72_9PHAE)

HSP 1 Score: 496 bits (1277), Expect = 1.220e-160
Identity = 285/316 (90.19%), Postives = 292/316 (92.41%), Query Frame = 0 
Query:    1 LSQLSLCGRDTLKWANIAIKVSLESHNLLQDAWPDEIVGQVPSAQVETIMGEHPLLPPIQDTFNKGDVEAYVLSIGRRFPALCKLLATLVTASPPKSQEPEEGXXXXXXXXXXXXXXXXESDGSSISAPFQIPFLVSLSISLVQRVLRMGEQAWANLEEERAGVKRDDPSPTRRRASXXXXXXXXXXXXNINTAAAGTLSPELAARVSGLLLPSAVTLLEALVASSRLEKAMEDRQGTVCQCMGQAVAQTPVQGGVRFAAYRSMAVIIRYIRPETAAEGLGVPILPLLFNEALLALGNRVNLHALNTETDVAPRSR 316
            L +LSLCGRDTL WANIAIKVSLESHNLLQDAWPDEIVGQ+PSAQVETIMGEHPLLPPIQDTFNKGDVEA+VLSIGRRFPALCKLLATLVTASPPKSQEPEEGXXXXXXXXXXXXXX  E DGSS SAPFQ PFLVSLSISLVQRVLRMGEQAWA LEEERAGVKRDDP PTRRRAS            + NTAA GTLSPELAARVSGLLLPSAVTLLEALVASSRLEKAMEDRQGTVCQCMGQAVAQTPVQGGVRFAAYRSMAVI+RYI+PETAAEGLGVPILPLLFNEALLALGNRVNLHALNT+T VAPRSR
Sbjct: 1044 LGKLSLCGRDTLTWANIAIKVSLESHNLLQDAWPDEIVGQIPSAQVETIMGEHPLLPPIQDTFNKGDVEAHVLSIGRRFPALCKLLATLVTASPPKSQEPEEGXXXXXXXXXXXXXXK-EIDGSSDSAPFQTPFLVSLSISLVQRVLRMGEQAWAKLEEERAGVKRDDPGPTRRRASAKTAQESTT---HTNTAA-GTLSPELAARVSGLLLPSAVTLLEALVASSRLEKAMEDRQGTVCQCMGQAVAQTPVQGGVRFAAYRSMAVIVRYIKPETAAEGLGVPILPLLFNEALLALGNRVNLHALNTKTVVAPRSR 1354
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BLAST of mRNA_Ecto-sp9_F_contig9774.17867.1 vs.
Match: Uncharacterized (protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FHK6_ECTSI)

HSP 1 Score: 444 bits (1142), Expect = 3.610e-149
Identity = 250/319 (78.37%), Postives = 256/319 (80.25%), Query Frame = 0 
Query:    1 LSQLSLCGRDTLKWANIAIKVSLESHNLLQDAWPDEIVGQVPSAQVETIMGEHPLLPPIQDTFNKGDVEAYVLSIGRRFPALCKLLATLVTASPPKSQEPEEGXXXXXXXXXXXXXXXXESDGSSISAPFQIPFLVSLSISLVQRVLRMGEQAWANLEEERAGVKRDDPSPTRRRASXXXXXXXXXXXXNINTAAA-GTLSPELAARVSGLLLPSAVTLLEALVASSRLEKAMEDRQGTVCQCMGQAVAQTPVQGGVRFAAYRSMAVIIRYIRPETAAEGLGVPILPLLFNEALLALGNRVNLHALNT--ETDVAPRSR 316
            L +LSLCGRDTLKWANIAIKVSLESHNLLQDAWPDEIVGQVPSAQVETIMGEHPLLPPIQDTFNKGDVEAYVLSIGRRFPALCKLLATLVTASPPKSQEPE                                           RVLRMGEQAWA LEEERAGVKRDDPSPTRRRAS            + NT+ A GTLSPELAARVSGLLLPSAVTLLEALVASSRLEKAMEDRQGTVCQCMGQAVAQTPVQGGVRFAAYR+MAVIIRYIRP+TAAEGLGVPILPLLFNEALLALGNRVNLHALNT  +TDV PRSR
Sbjct:  211 LGKLSLCGRDTLKWANIAIKVSLESHNLLQDAWPDEIVGQVPSAQVETIMGEHPLLPPIQDTFNKGDVEAYVLSIGRRFPALCKLLATLVTASPPKSQEPE-------------------------------------------RVLRMGEQAWAKLEEERAGVKRDDPSPTRRRASATTAQESAT---STNTSTADGTLSPELAARVSGLLLPSAVTLLEALVASSRLEKAMEDRQGTVCQCMGQAVAQTPVQGGVRFAAYRAMAVIIRYIRPDTAAEGLGVPILPLLFNEALLALGNRVNLHALNTTTKTDVGPRSR 483
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp9_F_contig9774.17867.1 vs.
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Ectocarpus species9 EcSCA_722f female vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
GLOBIN1.220e-16090.19domain-containing protein n=1 Tax=Ectocarpus sp. C... [more]
Uncharacterized3.610e-14978.37protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 ... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp9_F_contig9774contigEcto-sp9_F_contig9774:524..4713 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Ectocarpus species9 EcSCA_722f female2022-09-29
Diamond blastp: OGS1.0 of Ectocarpus species9 EcSCA_722f female vs UniRef902022-09-16
OGS1.0 of Ectocarpus species9 EcSCA_722f female2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp9_F_contig9774.17867.1mRNA_Ecto-sp9_F_contig9774.17867.1Ectocarpus species9 EcSCA_722f femalemRNAEcto-sp9_F_contig9774 524..4713 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp9_F_contig9774.17867.1 ID=prot_Ecto-sp9_F_contig9774.17867.1|Name=mRNA_Ecto-sp9_F_contig9774.17867.1|organism=Ectocarpus species9 EcSCA_722f female|type=polypeptide|length=317bp
LSQLSLCGRDTLKWANIAIKVSLESHNLLQDAWPDEIVGQVPSAQVETIM
GEHPLLPPIQDTFNKGDVEAYVLSIGRRFPALCKLLATLVTASPPKSQEP
EEGDGQQQQQQEEEKGKGKESDGSSISAPFQIPFLVSLSISLVQRVLRMG
EQAWANLEEERAGVKRDDPSPTRRRASAKTAQESTTTTTNINTAAAGTLS
PELAARVSGLLLPSAVTLLEALVASSRLEKAMEDRQGTVCQCMGQAVAQT
PVQGGVRFAAYRSMAVIIRYIRPETAAEGLGVPILPLLFNEALLALGNRV
NLHALNTETDVAPRSR*
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