prot_Ecto-sp9_F_contig9754.17854.1 (polypeptide) Ectocarpus species9 EcSCA_722f female

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp9_F_contig9754.17854.1
Unique Nameprot_Ecto-sp9_F_contig9754.17854.1
Typepolypeptide
OrganismEctocarpus species9 EcSCA_722f female (Ectocarpus species9 EcSCA_722f female)
Sequence length299
Homology
BLAST of mRNA_Ecto-sp9_F_contig9754.17854.1 vs.
Match: Uncharacterized (protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KEC4_9PHAE)

HSP 1 Score: 444 bits (1142), Expect = 1.150e-152
Identity = 266/299 (88.96%), Postives = 270/299 (90.30%), Query Frame = 0
Query:    1 IWDTAGTFPFKSVKDAYFGGTVGAMLVYDISNRSTFDDLARWLSLVRENSHKSVALILVGNKSDMSTTQREVSMVEGMRFARKHGMDFVETSALRGLHVEEACRQLIMSVARYLPQDKCVWSKKKRSHPLPLGWIPITADDWGNDVTGGNEENANPAIAIRMGGGSDGGKNAVSDRETPVDTDIDTDSDDAALMPXXXXXXXXXXXHPSRPPGARLPYSGTPITTMDESRSPPWGGGRVTSKVFGSSSIKPRGFCSSQNXXXXXXXXXXXXXXXXXXXXXXXXATRPNRVSPPRVLWYE 299
            IWDTAGT  FK VKDAYF GTVGA+LVYDISNRSTFDDLARWLSLVRENSHKSVAL+LVGNKSDMSTTQREVSMVEGMRFARKHGMDFVETSALRGLHVEEACRQLIMSVARYLPQDK VWSKKKRSHPLPLGWIPITADDWGNDVTGGNEENA PAIAIRM GGS G KNAVSDRET VDT             XXXXXXXXXXX+  RP G RLPYSGTPITTMDESRSPP GGGRV SK+FGSSSIKPRGFCSSQNXXXXXXXXXXXXXXXXXXXXXXXXATRPNRVSPPRVLWYE
Sbjct:   80 IWDTAGTLHFKCVKDAYFEGTVGALLVYDISNRSTFDDLARWLSLVRENSHKSVALVLVGNKSDMSTTQREVSMVEGMRFARKHGMDFVETSALRGLHVEEACRQLIMSVARYLPQDKYVWSKKKRSHPLPLGWIPITADDWGNDVTGGNEENAYPAIAIRMDGGSGGSKNAVSDRETSVDTXXXXXXXXXXXXXXXXXXXXXXXXY--RPSGTRLPYSGTPITTMDESRSPPSGGGRVASKIFGSSSIKPRGFCSSQNXXXXXXXXXXXXXXXXXXXXXXXXATRPNRVSPPRVLWYE 376          
BLAST of mRNA_Ecto-sp9_F_contig9754.17854.1 vs.
Match: Rab11C, (RAB family GTPase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LDH8_ECTSI)

HSP 1 Score: 246 bits (629), Expect = 1.330e-78
Identity = 121/125 (96.80%), Postives = 122/125 (97.60%), Query Frame = 0
Query:    1 IWDTAGTFPFKSVKDAYFGGTVGAMLVYDISNRSTFDDLARWLSLVRENSHKSVALILVGNKSDMSTTQREVSMVEGMRFARKHGMDFVETSALRGLHVEEACRQLIMSVARYLPQDKCVWSKKK 125
            IWDTAGTF FKSVKDA+FGGTVG MLVYDIS RSTFDDLARWLSLVRENSHKSVALILVGNKSDMSTTQREVSMVEGMRFARKHGMDFVETSALRGLHVEEACRQLIMSVARYLPQDKCVWSKKK
Sbjct:   80 IWDTAGTFAFKSVKDAFFGGTVGVMLVYDISKRSTFDDLARWLSLVRENSHKSVALILVGNKSDMSTTQREVSMVEGMRFARKHGMDFVETSALRGLHVEEACRQLIMSVARYLPQDKCVWSKKK 204          
BLAST of mRNA_Ecto-sp9_F_contig9754.17854.1 vs.
Match: Ras (family-domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CHB2_9STRA)

HSP 1 Score: 132 bits (333), Expect = 1.690e-32
Identity = 63/118 (53.39%), Postives = 86/118 (72.88%), Query Frame = 0
Query:    1 IWDTAGTFPFKSVKDAYFGGTVGAMLVYDISNRSTFDDLARWLSLVRENSHKSVALILVGNKSDMSTTQREVSMVEGMRFARKHGMDFVETSALRGLHVEEACRQLIMSVARYLPQDK 118
            IWDTAG   + ++  AY+ G VGAMLVYD+++R++FD + RWL  VR+N+H+++AL L+ NKSD++   R V   EG+  A  HGMDFVETSA  G +VE A R+LIM+VAR LP+ K
Sbjct:   81 IWDTAGQDRYSTLTQAYYRGAVGAMLVYDVTDRASFDAIKRWLKQVRDNAHRNIALSLIANKSDLAEEGRCVPTAEGLALAEAHGMDFVETSAATGENVETAFRRLIMAVARLLPEGK 198          
BLAST of mRNA_Ecto-sp9_F_contig9754.17854.1 vs.
Match: Ras (family-domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YTB2_9STRA)

HSP 1 Score: 129 bits (324), Expect = 1.770e-32
Identity = 63/119 (52.94%), Postives = 87/119 (73.11%), Query Frame = 0
Query:    1 IWDTAGTFPFKSVKDAYFGGTVGAMLVYDISNRSTFDDLARWLSLVRENSHKSVALILVGNKSDMST-TQREVSMVEGMRFARKHGMDFVETSALRGLHVEEACRQLIMSVARYLPQDK 118
            +WDTAG   F S+  AY+ G VGA+LVYD+++R++F+   RWL  +R+N+H+++A+ LVGNKSD     QR V+  EG+ FA  +GMDFVETSA  G +VE A R+LIM+VAR LP+ K
Sbjct:   73 VWDTAGQERFHSLTQAYYRGAVGALLVYDVTSRASFEGARRWLRQIRDNAHRNIAVSLVGNKSDRGGGAQRAVTTAEGVAFAEANGMDFVETSAATGENVETAFRRLIMAVARLLPEGK 191          
BLAST of mRNA_Ecto-sp9_F_contig9754.17854.1 vs.
Match: Uncharacterized (protein n=1 Tax=Phytophthora parasitica TaxID=4792 RepID=W2HQ38_PHYPR)

HSP 1 Score: 123 bits (309), Expect = 7.070e-30
Identity = 66/136 (48.53%), Postives = 91/136 (66.91%), Query Frame = 0
Query:    1 IWDTAGTFPFKSVKDAYFGGTVGAMLVYDISNRSTFDDLARWLSLVRENSHKSVALILVGNKSDMS--TTQREVSMVEGMRFARKHGMDFVETSALRGLHVEEACRQLIMSVARYLPQDKCVWSKKKRSHPLPLGW 134
            IWDTAG   F+S+  AY+   VGAM+VYDI+NRS+F+ +  WL+ V E+SH+S+ LILVGNK D++     REVS +E  RFA KH M+F+ETSAL   +V +A ++LI+ V R L       ++ K+   LP GW
Sbjct:   58 IWDTAGQERFQSLTAAYYRNAVGAMIVYDITNRSSFEHVTGWLAQVHEHSHESLVLILVGNKCDLAHLPESREVSTLEAARFAAKHSMEFLETSALDATNVVDAFKKLIVPVGRLLSP-----TEPKKIARLPPGW 188          
BLAST of mRNA_Ecto-sp9_F_contig9754.17854.1 vs.
Match: Uncharacterized (protein (Fragment) n=1 Tax=Phytophthora sojae (strain P6497) TaxID=1094619 RepID=G4ZAW0_PHYSP)

HSP 1 Score: 124 bits (311), Expect = 2.020e-29
Identity = 66/136 (48.53%), Postives = 91/136 (66.91%), Query Frame = 0
Query:    1 IWDTAGTFPFKSVKDAYFGGTVGAMLVYDISNRSTFDDLARWLSLVRENSHKSVALILVGNKSDMS--TTQREVSMVEGMRFARKHGMDFVETSALRGLHVEEACRQLIMSVARYLPQDKCVWSKKKRSHPLPLGW 134
            IWDTAG   F+S+  AY+   VGAM+VYDI+NRS+F+ +  WL+ V E+SH+S+ LILVGNK D++     REVS +E  RFA KH M+F+ETSAL   +V +A ++LI+ V R L       ++ K+   LP GW
Sbjct:  152 IWDTAGQERFQSLTAAYYRNAVGAMIVYDITNRSSFEHVTGWLAQVHEHSHESLVLILVGNKCDLAHLPESREVSTLEAARFAAKHSMEFLETSALDSTNVVDAFKKLIVPVGRLLSP-----TEPKKIARLPTGW 282          
BLAST of mRNA_Ecto-sp9_F_contig9754.17854.1 vs.
Match: Uncharacterized (protein n=6 Tax=Phytophthora TaxID=4783 RepID=H3GWU5_PHYRM)

HSP 1 Score: 124 bits (311), Expect = 2.200e-29
Identity = 66/136 (48.53%), Postives = 91/136 (66.91%), Query Frame = 0
Query:    1 IWDTAGTFPFKSVKDAYFGGTVGAMLVYDISNRSTFDDLARWLSLVRENSHKSVALILVGNKSDMS--TTQREVSMVEGMRFARKHGMDFVETSALRGLHVEEACRQLIMSVARYLPQDKCVWSKKKRSHPLPLGW 134
            IWDTAG   F+S+  AY+   VGAM+VYDI+NRS+F+ +  WL+ V E+SH+S+ LILVGNK D++     REVS +E  RFA KH M+F+ETSAL   +V +A ++LI+ V R L       ++ K+   LP GW
Sbjct:  149 IWDTAGQERFQSLTAAYYRNAVGAMIVYDITNRSSFEHVTGWLAQVHEHSHESLVLILVGNKCDLAHLPESREVSTLEAARFAAKHSMEFLETSALDSTNVVDAFKKLIVPVGRLLSP-----TEPKKIARLPTGW 279          
BLAST of mRNA_Ecto-sp9_F_contig9754.17854.1 vs.
Match: Uncharacterized (protein n=10 Tax=Phytophthora TaxID=4783 RepID=W2HPP4_PHYPR)

HSP 1 Score: 123 bits (309), Expect = 4.190e-29
Identity = 66/136 (48.53%), Postives = 91/136 (66.91%), Query Frame = 0
Query:    1 IWDTAGTFPFKSVKDAYFGGTVGAMLVYDISNRSTFDDLARWLSLVRENSHKSVALILVGNKSDMS--TTQREVSMVEGMRFARKHGMDFVETSALRGLHVEEACRQLIMSVARYLPQDKCVWSKKKRSHPLPLGW 134
            IWDTAG   F+S+  AY+   VGAM+VYDI+NRS+F+ +  WL+ V E+SH+S+ LILVGNK D++     REVS +E  RFA KH M+F+ETSAL   +V +A ++LI+ V R L       ++ K+   LP GW
Sbjct:  147 IWDTAGQERFQSLTAAYYRNAVGAMIVYDITNRSSFEHVTGWLAQVHEHSHESLVLILVGNKCDLAHLPESREVSTLEAARFAAKHSMEFLETSALDATNVVDAFKKLIVPVGRLLSP-----TEPKKIARLPPGW 277          
BLAST of mRNA_Ecto-sp9_F_contig9754.17854.1 vs.
Match: Gtpase (ypt3 n=1 Tax=Plasmopara halstedii TaxID=4781 RepID=A0A0P1AT66_PLAHL)

HSP 1 Score: 121 bits (304), Expect = 8.170e-29
Identity = 65/136 (47.79%), Postives = 90/136 (66.18%), Query Frame = 0
Query:    1 IWDTAGTFPFKSVKDAYFGGTVGAMLVYDISNRSTFDDLARWLSLVRENSHKSVALILVGNKSDMS--TTQREVSMVEGMRFARKHGMDFVETSALRGLHVEEACRQLIMSVARYLPQDKCVWSKKKRSHPLPLGW 134
            IWDTAG   F S+  AY+   VGAM+VYDI+NRS+F+ +  WL+ V E+SH+S+ L+LVGNK D++     REVS +E  RFA K+ M+F+ETSAL   +V +A ++LI+ V R L       +K K+   LP GW
Sbjct:   94 IWDTAGRERFHSLTAAYYRNAVGAMIVYDITNRSSFEHITGWLAQVHEHSHESLVLVLVGNKCDLAHLPNSREVSTLEAARFAAKYSMEFLETSALDTTNVVDAFKKLIVPVGRLLSP-----TKPKKIARLPPGW 224          
BLAST of mRNA_Ecto-sp9_F_contig9754.17854.1 vs.
Match: Uncharacterized (protein n=1 Tax=Phytophthora kernoviae TaxID=325452 RepID=A0A3F2S0R5_9STRA)

HSP 1 Score: 121 bits (304), Expect = 8.340e-29
Identity = 67/137 (48.91%), Postives = 89/137 (64.96%), Query Frame = 0
Query:    1 IWDTAGTFPFKSVKDAYFGGTVGAMLVYDISNRSTFDDLARWLSLVRENSHKSVALILVGNKSDMS--TTQREVSMVEGMRFARKHGMDFVETSALRGLHVEEACRQLIMSVARYL-PQDKCVWSKKKRSHPLPLGW 134
            IWDTAG   F+S+  AY+   VGAM+VYDI+NRS+F+ +  WL+ V E+SH S+ LILVGNK D++     REVS +E  RFA KH M+F+E SAL   +V +A ++LI+ V R L P D       K+   LP GW
Sbjct:  160 IWDTAGQERFQSLTAAYYRNAVGAMIVYDITNRSSFEHVTGWLAQVHEHSHHSLVLILVGNKCDLAHLPESREVSTLEAARFAAKHSMEFLEASALDSTNVVDAFKKLIVPVGRLLSPTDP------KKIARLPTGW 290          
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp9_F_contig9754.17854.1 vs.
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Ectocarpus species9 EcSCA_722f female vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
Uncharacterized1.150e-15288.96protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=... [more]
Rab11C,1.330e-7896.80RAB family GTPase n=1 Tax=Ectocarpus siliculosus T... [more]
Ras1.690e-3253.39family-domain-containing protein n=1 Tax=Tribonema... [more]
Ras1.770e-3252.94family-domain-containing protein n=1 Tax=Tribonema... [more]
Uncharacterized7.070e-3048.53protein n=1 Tax=Phytophthora parasitica TaxID=4792... [more]
Uncharacterized2.020e-2948.53protein (Fragment) n=1 Tax=Phytophthora sojae (str... [more]
Uncharacterized2.200e-2948.53protein n=6 Tax=Phytophthora TaxID=4783 RepID=H3GW... [more]
Uncharacterized4.190e-2948.53protein n=10 Tax=Phytophthora TaxID=4783 RepID=W2H... [more]
Gtpase8.170e-2947.79ypt3 n=1 Tax=Plasmopara halstedii TaxID=4781 RepID... [more]
Uncharacterized8.340e-2948.91protein n=1 Tax=Phytophthora kernoviae TaxID=32545... [more]

Pages

back to top
InterPro
Analysis Name: InterProScan on OGS1.0 of Ectocarpus species9 EcSCA_722f female
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePRINTSPR00449RASTRNSFRMNGcoord: 88..110
score: 31.61
coord: 52..65
score: 46.2
NoneNo IPR availableSMARTSM00175rab_sub_5coord: 1..117
e-value: 5.2E-13
score: 52.8
NoneNo IPR availableSMARTSM00173ras_sub_4coord: 1..113
e-value: 4.7E-7
score: -10.5
NoneNo IPR availableGENE3D3.40.50.300coord: 1..128
e-value: 1.7E-31
score: 110.9
NoneNo IPR availablePANTHERPTHR24073FAMILY NOT NAMEDcoord: 1..113
NoneNo IPR availablePANTHERPTHR24073:SF350RAS-RELATED PROTEIN RABA4Acoord: 1..113
NoneNo IPR availablePROSITEPS51419RABcoord: 1..174
score: 16.578
IPR001806Small GTPasePFAMPF00071Rascoord: 1..110
e-value: 1.2E-26
score: 93.3
IPR027417P-loop containing nucleoside triphosphate hydrolaseSUPERFAMILY52540P-loop containing nucleoside triphosphate hydrolasescoord: 1..112

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp9_F_contig9754contigEcto-sp9_F_contig9754:1263..3754 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Ectocarpus species9 EcSCA_722f female2022-09-29
Diamond blastp: OGS1.0 of Ectocarpus species9 EcSCA_722f female vs UniRef902022-09-16
OGS1.0 of Ectocarpus species9 EcSCA_722f female2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp9_F_contig9754.17854.1mRNA_Ecto-sp9_F_contig9754.17854.1Ectocarpus species9 EcSCA_722f femalemRNAEcto-sp9_F_contig9754 1263..3754 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp9_F_contig9754.17854.1 ID=prot_Ecto-sp9_F_contig9754.17854.1|Name=mRNA_Ecto-sp9_F_contig9754.17854.1|organism=Ectocarpus species9 EcSCA_722f female|type=polypeptide|length=299bp
IWDTAGTFPFKSVKDAYFGGTVGAMLVYDISNRSTFDDLARWLSLVRENS
HKSVALILVGNKSDMSTTQREVSMVEGMRFARKHGMDFVETSALRGLHVE
EACRQLIMSVARYLPQDKCVWSKKKRSHPLPLGWIPITADDWGNDVTGGN
EENANPAIAIRMGGGSDGGKNAVSDRETPVDTDIDTDSDDAALMPPPPPP
PPPPPPHPSRPPGARLPYSGTPITTMDESRSPPWGGGRVTSKVFGSSSIK
PRGFCSSQNNSGGGNHHHQRASSEPSSTAVAAAATRPNRVSPPRVLWYE
back to top
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR001806Small_GTPase
IPR027417P-loop_NTPase