prot_Ecto-sp9_F_contig975.17851.1 (polypeptide) Ectocarpus species9 EcSCA_722f female

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp9_F_contig975.17851.1
Unique Nameprot_Ecto-sp9_F_contig975.17851.1
Typepolypeptide
OrganismEctocarpus species9 EcSCA_722f female (Ectocarpus species9 EcSCA_722f female)
Sequence length137
Homology
BLAST of mRNA_Ecto-sp9_F_contig975.17851.1 vs.
Match: GpcrRhopsn4 (domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LKX0_ECTSI)

HSP 1 Score: 262 bits (669), Expect = 2.400e-84
Identity = 136/136 (100.00%), Postives = 136/136 (100.00%), Query Frame = 0
Query:    1 MFVILGRMSDDHHAKSHSLDSAPAYFLVLVRLALLGVFLLGALKTFEAEQNSVRRGFIGRLVVLGSLWFAAMPVLVLVAMICAEYVQEPVVAVGSLLAQSLGLSVLSWLFLTRNEYYKMSSLAHTGMLPTNNFRMD 136
            MFVILGRMSDDHHAKSHSLDSAPAYFLVLVRLALLGVFLLGALKTFEAEQNSVRRGFIGRLVVLGSLWFAAMPVLVLVAMICAEYVQEPVVAVGSLLAQSLGLSVLSWLFLTRNEYYKMSSLAHTGMLPTNNFRMD
Sbjct:  296 MFVILGRMSDDHHAKSHSLDSAPAYFLVLVRLALLGVFLLGALKTFEAEQNSVRRGFIGRLVVLGSLWFAAMPVLVLVAMICAEYVQEPVVAVGSLLAQSLGLSVLSWLFLTRNEYYKMSSLAHTGMLPTNNFRMD 431          
BLAST of mRNA_Ecto-sp9_F_contig975.17851.1 vs.
Match: Hypothetical (protein n=1 Tax=Eutreptiella gymnastica TaxID=73025 RepID=A0A7S4CD68_9EUGL)

HSP 1 Score: 91.3 bits (225), Expect = 7.350e-19
Identity = 50/129 (38.76%), Postives = 74/129 (57.36%), Query Frame = 0
Query:    4 ILGRMSDDHHAKSHSLDSAPAYFLVLVRLALLGVFLLGALKTFEAEQNSVRRGFIGRLVVLGSLWFAAMPVLVLVAMICAEYVQEPVVAVGSLLAQSLGLSVLSWLFLTRNEYYKMSSLAHTGMLPTNN 132
            ILGR  +D   + H  + AP Y L+ +R+ L   F LG + T    +++   GF+GRL +LG+ WF A PVLV+       Y +  VV  G++  QS  L +  ++FL+R+EYYK+SSL+  G L   N
Sbjct:  318 ILGRQYEDDFTQFHDYEHAPGYTLMAMRVFLCLAFWLGTMTTIRGSRDANVAGFLGRLTLLGTTWFLAFPVLVVCTAFLPPYNRHSVVTSGAITMQSFALCLFLYMFLSRSEYYKISSLSKMGTLFQTN 446          
BLAST of mRNA_Ecto-sp9_F_contig975.17851.1 vs.
Match: Hypothetical (protein n=1 Tax=Polyblepharides amylifera TaxID=1486889 RepID=A0A7R9SVE3_9CHLO)

HSP 1 Score: 76.6 bits (187), Expect = 1.040e-13
Identity = 51/145 (35.17%), Postives = 78/145 (53.79%), Query Frame = 0
Query:    1 MFVILGRMSDDHHAKSHSLDSAPAYFLVLVRLALLGVFLLGALKTFE---------AEQNSVRRG-------FIGRLVVLGSLWFAAMPVLVLVAMICAE-YVQEPVVAVGSLLAQSLGLSVLSWLFLTRNEYYKMSSLAHTGML 128
            +  +LGR  +D   + H  +  P Y L+ +R+ L  +FL+G L T +         A   S   G       F+ +L+V+GS+WF A PVLV+ A    E Y + PVV  GS++ QS+ L  +S LFL  + Y K+S+LA+ G +
Sbjct:  255 VLAMLGRRYEDDFNQFHDFEHPPGYCLMALRVTLCALFLIGGLNTLKRSSGGNVASAGSGSTTPGAAVAVSSFMWKLLVMGSVWFLAFPVLVVCASPFFEPYNRHPVVTGGSIILQSVALGSISTLFLQNSSYLKLSTLANMGTI 399          
BLAST of mRNA_Ecto-sp9_F_contig975.17851.1 vs.
Match: Hypothetical (protein (Fragment) n=1 Tax=Strombidinopsis acuminata TaxID=141414 RepID=A0A7S3SL10_9SPIT)

HSP 1 Score: 65.9 bits (159), Expect = 1.980e-11
Identity = 35/83 (42.17%), Postives = 53/83 (63.86%), Query Frame = 0
Query:   44 KTFEAEQNSVRRGFIGRLVVLGSLWFAAMPVLVLVAMICAEYVQEPVVAVGSLLAQSLGLSVLSWLFLTRNEYYKMSSLAHTG 126
            ++   E+      F+ RL V G  WF  +P+LVL+A +   Y +  +VA GS+L Q+  L++LS LFL+ +E+YK+SSLAH G
Sbjct:   13 RSLRLERQPEIASFLRRLFVYGGSWFLCLPLLVLLAAVLPPYRRHQLVAGGSILLQTAALALLSRLFLSSSEFYKISSLAHLG 95          
BLAST of mRNA_Ecto-sp9_F_contig975.17851.1 vs.
Match: Hypothetical (protein (Fragment) n=1 Tax=Polarella glacialis TaxID=89957 RepID=A0A813FXL4_POLGL)

HSP 1 Score: 67.8 bits (164), Expect = 1.640e-10
Identity = 44/127 (34.65%), Postives = 71/127 (55.91%), Query Frame = 0
Query:    1 MFVILGRMSDDHHAKSHSLDSAPAYFLVLVRLALLGVFLLGALKTFEAEQNSVRRGFIGRLVVLGSLWFAAMPVLVLVAMICAEYVQEPVVAVGSLLAQSLGLSVLSWLFLTRNEYYKMSSLAHTGM 127
            M V  G++ DD   K H  +    + L+ +RL L G F L A++    +  S  R F+ +  + GS++F A P + L A + A Y+Q  V++VG +L Q      L+ LFLTR EY+K+S+L+ + +
Sbjct:  969 MLVGFGKIKDDAAYKFHENEGPVGWILLTMRLLLYGWF-LWAVQASARDGGSKVRNFLDQFRIAGSIYFLAYPTIFLAAKMFAPYLQHGVMSVGLMLMQGGSNLWLASLFLTRGEYFKVSTLSSSDL 1094          
BLAST of mRNA_Ecto-sp9_F_contig975.17851.1 vs.
Match: Hypothetical (protein n=1 Tax=Pyrodinium bahamense TaxID=73915 RepID=A0A7S0B5P3_9DINO)

HSP 1 Score: 57.8 bits (138), Expect = 7.460e-8
Identity = 42/126 (33.33%), Postives = 67/126 (53.17%), Query Frame = 0
Query:    5 LGRMSDDHHAKSHSLDSAPAYFLVLVRLALLGVFLLGALKTFEAEQNSVRRGFIGRLVVLGSLWFAAMPVLVLVAMICAEYVQEPVVAVGSLLAQSLGLSVLSWLFLTRNEYYKMSSLAHTGMLPT 130
            + +  DD   K H  +      LV +RLAL   FLL   +T+ AE     + F+ R  +  SL + A P+L L+A + A Y++   +  G  + Q+  L+  + +FLTR EY+++SSL    +LPT
Sbjct:    1 VAKARDDASFKFHENEGMCGLVLVSLRLALYLWFLLSMRRTY-AEAPMKIQSFVTRFRIASSLHYLAYPLLFLIAPLVAPYLRHKFMLAGLFIMQAWSLTWYTQMFLTRGEYFEVSSLGG-NILPT 124          
BLAST of mRNA_Ecto-sp9_F_contig975.17851.1 vs.
Match: GpcrRhopsn4 (domain-containing protein n=1 Tax=Pseudocohnilembus persalinus TaxID=266149 RepID=A0A0V0QHZ3_PSEPJ)

HSP 1 Score: 59.7 bits (143), Expect = 9.350e-8
Identity = 36/129 (27.91%), Postives = 71/129 (55.04%), Query Frame = 0
Query:    1 MFVILGRMSDDHHAKSHSLDSAPAYFLVLVRLALLGVFLLGALKTFEAEQNSVRRGFIGRLVVLGSLWFAAMPVLVLVAMICAEYVQEPVVAVGSLLAQSLGLSVLSWLFLTRNEYYKMSSLAHTGMLP 129
            M + LG+++D+  +K H  D    Y ++++++ L   F  G L   + + +   + FI +L   GSL+F A+P+L++++   A Y +  ++ +G+LL Q+    VL +L  ++   Y   S+   G+LP
Sbjct:  273 MIMGLGKLTDNSDSKYHLYDGWVGYVILVIQIGLFIYFQFG-LNNIKQKASIKLKSFIQQLSFFGSLYFLAIPILLVISWFFAFYDRNIIITLGTLLIQAAAFIVLIYLNTSQKSAYYKVSMKSQGILP 400          
BLAST of mRNA_Ecto-sp9_F_contig975.17851.1 vs.
Match: Hypothetical (protein (Fragment) n=1 Tax=Alexandrium catenella TaxID=2925 RepID=A0A7S1RV62_ALECA)

HSP 1 Score: 57.8 bits (138), Expect = 4.480e-7
Identity = 42/124 (33.87%), Postives = 68/124 (54.84%), Query Frame = 0
Query:    1 MFVILGRMSDDHHAKSHSLDSAPAYFLVLVRLALLGVFLLGALKTFEAEQNSVRRGFI-GRLVVLGSLWFAAMPVLVLVAMICAEYVQEPVVAVGSLLAQSLGLSVLSWLFLTRNEYYKMSSLA 123
            M V  G++ DD     H  +    + L+++RL LL V+ L A+++  +E  +  R F+ G+   +GSL+F + P + LV    A Y+Q  V+ VG    Q+     L   FLTR EY+K+S+L+
Sbjct:  312 MLVGFGKLKDDSAYAFHENEGILGWILLVLRL-LLYVWFLWAVQSSASEGGTRLRSFLLGQFRAVGSLYFLSYPAIFLVTKCFAPYLQHGVMTVGLEAMQAASSVWLCMNFLTRGEYFKVSTLS 434          
BLAST of mRNA_Ecto-sp9_F_contig975.17851.1 vs.
Match: GpcrRhopsn4 (domain-containing protein n=1 Tax=Stentor coeruleus TaxID=5963 RepID=A0A1R2CF92_9CILI)

HSP 1 Score: 55.1 bits (131), Expect = 3.840e-6
Identity = 30/125 (24.00%), Postives = 66/125 (52.80%), Query Frame = 0
Query:    1 MFVILGRMSDDHHAKSHSLDSAPAYFLVLVRLALLGVFLLGALKTFEAEQNSVRRGFIGRLVVLGSLWFAAMPVLVLVAMICAEYVQEPVVAVGSLLAQSLGLSVLSWLFLTRNEYYKMSSLAHT 125
            M + LGR++ D   K+   +  P Y L+++R+ L+ ++ +   K    + +     F+ R V + S++F A+P++++ +     Y +   V VG    Q +    L+ LF  ++ +YK+S+++ +
Sbjct:  278 MIIGLGRITQDASNKNSDFECVPGYILIVIRI-LMWIWFIFNSKDLYVKASCQLENFLNRFVFVSSMYFVALPIVIIASWFLEPYRRNAFVVVGVNTVQVIVFFYLTHLFSEKSAFYKVSTISES 401          
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp9_F_contig975.17851.1 vs.
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Ectocarpus species9 EcSCA_722f female vs UniRef90)
Total hits: 9
Match NameE-valueIdentityDescription
GpcrRhopsn42.400e-84100.00domain-containing protein n=2 Tax=Ectocarpus TaxID... [more]
Hypothetical7.350e-1938.76protein n=1 Tax=Eutreptiella gymnastica TaxID=7302... [more]
Hypothetical1.040e-1335.17protein n=1 Tax=Polyblepharides amylifera TaxID=14... [more]
Hypothetical1.980e-1142.17protein (Fragment) n=1 Tax=Strombidinopsis acumina... [more]
Hypothetical1.640e-1034.65protein (Fragment) n=1 Tax=Polarella glacialis Tax... [more]
Hypothetical7.460e-833.33protein n=1 Tax=Pyrodinium bahamense TaxID=73915 R... [more]
GpcrRhopsn49.350e-827.91domain-containing protein n=1 Tax=Pseudocohnilembu... [more]
Hypothetical4.480e-733.87protein (Fragment) n=1 Tax=Alexandrium catenella T... [more]
GpcrRhopsn43.840e-624.00domain-containing protein n=1 Tax=Stentor coeruleu... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0 of Ectocarpus species9 EcSCA_722f female
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR019336Intimal thickness related receptor, IRPPFAMPF10192GpcrRhopsn4coord: 2..106
e-value: 3.8E-20
score: 72.4
NoneNo IPR availablePANTHERPTHR23252INTIMAL THICKNESS RECEPTOR-RELATEDcoord: 2..122
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 92..111
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 47..57
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 1..23
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 24..46
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 58..86
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 112..136
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 87..91
NoneNo IPR availableTMHMMTMhelixcoord: 89..111
NoneNo IPR availableTMHMMTMhelixcoord: 57..79
NoneNo IPR availableTMHMMTMhelixcoord: 22..44

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp9_F_contig975contigEcto-sp9_F_contig975:26017..27878 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Ectocarpus species9 EcSCA_722f female2022-09-29
Diamond blastp: OGS1.0 of Ectocarpus species9 EcSCA_722f female vs UniRef902022-09-16
OGS1.0 of Ectocarpus species9 EcSCA_722f female2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp9_F_contig975.17851.1mRNA_Ecto-sp9_F_contig975.17851.1Ectocarpus species9 EcSCA_722f femalemRNAEcto-sp9_F_contig975 24872..27925 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp9_F_contig975.17851.1 ID=prot_Ecto-sp9_F_contig975.17851.1|Name=mRNA_Ecto-sp9_F_contig975.17851.1|organism=Ectocarpus species9 EcSCA_722f female|type=polypeptide|length=137bp
MFVILGRMSDDHHAKSHSLDSAPAYFLVLVRLALLGVFLLGALKTFEAEQ
NSVRRGFIGRLVVLGSLWFAAMPVLVLVAMICAEYVQEPVVAVGSLLAQS
LGLSVLSWLFLTRNEYYKMSSLAHTGMLPTNNFRMD*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR019336Intimal_thickness-rel_rcpt