prot_Ecto-sp9_F_contig9739.17839.1 (polypeptide) Ectocarpus species9 EcSCA_722f female

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp9_F_contig9739.17839.1
Unique Nameprot_Ecto-sp9_F_contig9739.17839.1
Typepolypeptide
OrganismEctocarpus species9 EcSCA_722f female (Ectocarpus species9 EcSCA_722f female)
Sequence length218
Homology
BLAST of mRNA_Ecto-sp9_F_contig9739.17839.1 vs.
Match: Hydroxymethylglutaryl-CoA (synthase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FXY3_ECTSI)

HSP 1 Score: 432 bits (1112), Expect = 9.520e-145
Identity = 216/218 (99.08%), Postives = 217/218 (99.54%), Query Frame = 0
Query:    1 MSVPAPAGGGGGEGRPDNVGILAADVYFPSTFVSQEDLEVANGVSAGKYTIGLGQEAMAFTGDREDINSMCLTVVAQLLEKYDVPKDRIGRIEVGTETLIDKSKSTKTILMSLFEDSGNDDIEGVTTVNACYGGTAALLNAVAWVESSGWDGRYAIVVAADIAVYAEGPARPTGGCGAVAVLVGPDAPLVINMKTRASYACDVWDFFKPDMSSEYPRV 218
            MSV APAGGGGGEGRPDNVGILAADVYFPSTFVSQEDLEVANGVSAGKYTIGLGQEAMAFTGDREDINSMCLTVVAQLLEKYDVPKDRIGRIEVGTETLIDKSKSTKT+LMSLFEDSGNDDIEGVTTVNACYGGTAALLNAVAWVESSGWDGRYAIVVAADIAVYAEGPARPTGGCGAVAVLVGPDAPLVINMKTRASYACDVWDFFKPDMSSEYPRV
Sbjct:    1 MSVSAPAGGGGGEGRPDNVGILAADVYFPSTFVSQEDLEVANGVSAGKYTIGLGQEAMAFTGDREDINSMCLTVVAQLLEKYDVPKDRIGRIEVGTETLIDKSKSTKTVLMSLFEDSGNDDIEGVTTVNACYGGTAALLNAVAWVESSGWDGRYAIVVAADIAVYAEGPARPTGGCGAVAVLVGPDAPLVINMKTRASYACDVWDFFKPDMSSEYPRV 218          
BLAST of mRNA_Ecto-sp9_F_contig9739.17839.1 vs.
Match: Hydroxymethylglutaryl-CoA (synthase (Fragment) n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JG45_9PHAE)

HSP 1 Score: 413 bits (1062), Expect = 1.940e-144
Identity = 207/211 (98.10%), Postives = 208/211 (98.58%), Query Frame = 0
Query:    8 GGGGGEGRPDNVGILAADVYFPSTFVSQEDLEVANGVSAGKYTIGLGQEAMAFTGDREDINSMCLTVVAQLLEKYDVPKDRIGRIEVGTETLIDKSKSTKTILMSLFEDSGNDDIEGVTTVNACYGGTAALLNAVAWVESSGWDGRYAIVVAADIAVYAEGPARPTGGCGAVAVLVGPDAPLVINMKTRASYACDVWDFFKPDMSSEYPRV 218
            GGGGGE RP NVGILAADVYFPSTFVSQEDLEVAN VSAGKYTIGLGQEAMAFTGDREDINSMCLTVVAQLLEKYDVPKDRIGRIEVGTETLIDKSKSTKT+LMSLFEDSGNDDIEGVTTVNACYGGTAALLNAVAWVESSGWDGRYAIVVAADIAVYAEGPARPTGGCGAVAVLVGPDAPLVINMKTRASYACDVWDFFKPDMSSEYPRV
Sbjct:   39 GGGGGECRPANVGILAADVYFPSTFVSQEDLEVANSVSAGKYTIGLGQEAMAFTGDREDINSMCLTVVAQLLEKYDVPKDRIGRIEVGTETLIDKSKSTKTVLMSLFEDSGNDDIEGVTTVNACYGGTAALLNAVAWVESSGWDGRYAIVVAADIAVYAEGPARPTGGCGAVAVLVGPDAPLVINMKTRASYACDVWDFFKPDMSSEYPRV 249          
BLAST of mRNA_Ecto-sp9_F_contig9739.17839.1 vs.
Match: Hydroxymethylglutaryl-coenzyme (A synthase N terminal-domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836C9U2_9STRA)

HSP 1 Score: 331 bits (848), Expect = 1.710e-103
Identity = 162/208 (77.88%), Postives = 182/208 (87.50%), Query Frame = 0
Query:   11 GGEGRPDNVGILAADVYFPSTFVSQEDLEVANGVSAGKYTIGLGQEAMAFTGDREDINSMCLTVVAQLLEKYDVPKDRIGRIEVGTETLIDKSKSTKTILMSLFEDSGNDDIEGVTTVNACYGGTAALLNAVAWVESSGWDGRYAIVVAADIAVYAEGPARPTGGCGAVAVLVGPDAPLVINMKTRASYACDVWDFFKPDMSSEYPRV 218
            GG  RP NVGILAA+VYFPST+V Q ++E ANGVS+GKYTIGLGQ  MAFTGDREDINS+ LT +A LLEK+ +  + IGR+EVGTETLIDKSKSTKT+LMSL  D  N D+EGVTTVNACYGGTAALLN++AW+ESS WDGRYAIVVAADIAVYAEGPARPTGGCGAVAVL+GPDAPL +N   R ++ACDVWDFFKPDMSSEYPRV
Sbjct:   15 GGGSRPTNVGILAAEVYFPSTYVDQAEMEKANGVSSGKYTIGLGQLEMAFTGDREDINSIALTALAGLLEKFSIDPNDIGRLEVGTETLIDKSKSTKTVLMSLLGD--NQDVEGVTTVNACYGGTAALLNSIAWIESSAWDGRYAIVVAADIAVYAEGPARPTGGCGAVAVLIGPDAPLAVNACARTTHACDVWDFFKPDMSSEYPRV 220          
BLAST of mRNA_Ecto-sp9_F_contig9739.17839.1 vs.
Match: Hydroxymethylglutaryl-CoA (synthase (Fragment) n=1 Tax=Spumella elongata TaxID=89044 RepID=A0A7S3HLA9_9STRA)

HSP 1 Score: 309 bits (791), Expect = 2.420e-103
Identity = 150/202 (74.26%), Postives = 176/202 (87.13%), Query Frame = 0
Query:   17 DNVGILAADVYFPSTFVSQEDLEVANGVSAGKYTIGLGQEAMAFTGDREDINSMCLTVVAQLLEKYDVPKDRIGRIEVGTETLIDKSKSTKTILMSLFEDSGNDDIEGVTTVNACYGGTAALLNAVAWVESSGWDGRYAIVVAADIAVYAEGPARPTGGCGAVAVLVGPDAPLVINMKTRASYACDVWDFFKPDMSSEYPRV 218
            +NVGILA +VYFPS++V+Q DLEVA GVSAGKYTIGLGQE+MAFTGD+EDINS+ LTVV  LLEKY +    IGR+E+GTE+L+DKSKSTKT+LM LFE+SGN +IEG T VNACYGGTA+LLNA++WV+SS WDGRYAIVVAADIAVYA GPAR TGGCGAVA+LVG +APL  +M++R +YA DVWDFFKP M SEYP V
Sbjct:    7 NNVGILAMEVYFPSSYVTQTDLEVAFGVSAGKYTIGLGQESMAFTGDQEDINSVALTVVHNLLEKYSISPSEIGRLEIGTESLVDKSKSTKTVLMKLFEESGNTNIEGATVVNACYGGTASLLNALSWVDSSAWDGRYAIVVAADIAVYAAGPARATGGCGAVAMLVGRNAPLQFDMRSRTTYAADVWDFFKPVMDSEYPVV 208          
BLAST of mRNA_Ecto-sp9_F_contig9739.17839.1 vs.
Match: Hydroxymethylglutaryl-CoA (synthase (Fragment) n=1 Tax=Phaeomonas parva TaxID=124430 RepID=A0A7S1TN15_9STRA)

HSP 1 Score: 306 bits (783), Expect = 2.460e-98
Identity = 148/202 (73.27%), Postives = 172/202 (85.15%), Query Frame = 0
Query:   17 DNVGILAADVYFPSTFVSQEDLEVANGVSAGKYTIGLGQEAMAFTGDREDINSMCLTVVAQLLEKYDVPKDRIGRIEVGTETLIDKSKSTKTILMSLFEDSGNDDIEGVTTVNACYGGTAALLNAVAWVESSGWDGRYAIVVAADIAVYAEGPARPTGGCGAVAVLVGPDAPLVINMKTRASYACDVWDFFKPDMSSEYPRV 218
            +NVGILAA+VYFP T V Q DLE A+GVSAGKYT GLGQ+ MAFTGDREDINS+ LTV   LL+KY +    IGR+EVGTETL+DKSKSTKT+LM LFE+SGN D+EG T VNACYGGTAAL+NAV +VES GWDGRYA+V+AADIAVYA+GPARPTGGCGAVAVL+GPDAPL I++K RA++A +VWDF+KP    EYP V
Sbjct:  339 ENVGILAAEVYFPGTCVRQSDLEEADGVSAGKYTKGLGQDVMAFTGDREDINSVALTVFKNLLDKYGLDPRDIGRLEVGTETLVDKSKSTKTVLMQLFEESGNTDVEGATVVNACYGGTAALINAVNYVESGGWDGRYAVVIAADIAVYAKGPARPTGGCGAVAVLIGPDAPLAIDLKGRATHAANVWDFYKPRHDVEYPEV 540          
BLAST of mRNA_Ecto-sp9_F_contig9739.17839.1 vs.
Match: Hydroxymethylglutaryl-CoA (synthase (Fragment) n=1 Tax=Pinguiococcus pyrenoidosus TaxID=172671 RepID=A0A7R9UCE0_9STRA)

HSP 1 Score: 302 bits (773), Expect = 9.690e-98
Identity = 143/202 (70.79%), Postives = 173/202 (85.64%), Query Frame = 0
Query:   17 DNVGILAADVYFPSTFVSQEDLEVANGVSAGKYTIGLGQEAMAFTGDREDINSMCLTVVAQLLEKYDVPKDRIGRIEVGTETLIDKSKSTKTILMSLFEDSGNDDIEGVTTVNACYGGTAALLNAVAWVESSGWDGRYAIVVAADIAVYAEGPARPTGGCGAVAVLVGPDAPLVINMKTRASYACDVWDFFKPDMSSEYPRV 218
            ++VGILA +VYFPST+VSQ+DLE ANGVS GKYT GLGQEAMAFT DRED+NS+ LTV  +LLEKY++    IGR+EVGTETL+DKSKSTKT+LM LFEDSGN D+EG T VNACYGGT+AL+NA+ +VESS WDGRYA+V+AADIAVY  GPARPTGG GA+AVL+GPDAPLV+++K RA++A + WDF+KP    E+P V
Sbjct:   38 EDVGILAMEVYFPSTYVSQKDLEKANGVSEGKYTKGLGQEAMAFTSDREDVNSVALTVFHRLLEKYEIDPKDIGRVEVGTETLVDKSKSTKTVLMQLFEDSGNTDVEGATVVNACYGGTSALINAINYVESSSWDGRYAVVIAADIAVYEAGPARPTGGAGAIAVLIGPDAPLVVDLKGRATHAVNAWDFYKPRHDVEFPEV 239          
BLAST of mRNA_Ecto-sp9_F_contig9739.17839.1 vs.
Match: Uncharacterized (protein n=2 Tax=Monodopsidaceae TaxID=425072 RepID=A0A4D9DA31_9STRA)

HSP 1 Score: 319 bits (817), Expect = 1.200e-97
Identity = 152/208 (73.08%), Postives = 181/208 (87.02%), Query Frame = 0
Query:   11 GGEGRPDNVGILAADVYFPSTFVSQEDLEVANGVSAGKYTIGLGQEAMAFTGDREDINSMCLTVVAQLLEKYDVPKDRIGRIEVGTETLIDKSKSTKTILMSLFEDSGNDDIEGVTTVNACYGGTAALLNAVAWVESSGWDGRYAIVVAADIAVYAEGPARPTGGCGAVAVLVGPDAPLVINMKTRASYACDVWDFFKPDMSSEYPRV 218
            GG  RP NVGILAA++YFPST+V Q  LE A+GVS GK+T GLGQ  MAF GDREDINS+ LTVV  LL KY++P++++GR+EVGTETL+D++KSTKT+LMSLFE SGN DIEG T VNACYGGTAALLNA+AWVESSGWDGRYAIVV+ADIA+YA+GPA+PTGGCGAVA+LVGPDAPLVI+ + RA++A + WDFFKP  +SEYP V
Sbjct:  124 GGGRRPQNVGILAAEIYFPSTYVRQTLLEKAHGVSQGKFTSGLGQAGMAFVGDREDINSIALTVVENLLNKYEIPREKVGRLEVGTETLVDRAKSTKTVLMSLFEASGNTDIEGTTVVNACYGGTAALLNALAWVESSGWDGRYAIVVSADIAIYADGPAKPTGGCGAVALLVGPDAPLVIDPQLRATHASNTWDFFKPKFASEYPEV 331          
BLAST of mRNA_Ecto-sp9_F_contig9739.17839.1 vs.
Match: Hydroxymethylglutaryl-CoA (synthase (Fragment) n=1 Tax=archaeon TaxID=1906665 RepID=A0A482SR24_9ARCH)

HSP 1 Score: 299 bits (766), Expect = 2.030e-96
Identity = 145/200 (72.50%), Postives = 168/200 (84.00%), Query Frame = 0
Query:   19 VGILAADVYFPSTFVSQEDLEVANGVSAGKYTIGLGQEAMAFTGDREDINSMCLTVVAQLLEKYDVPKDRIGRIEVGTETLIDKSKSTKTILMSLFEDSGNDDIEGVTTVNACYGGTAALLNAVAWVESSGWDGRYAIVVAADIAVYAEGPARPTGGCGAVAVLVGPDAPLVINMKTRASYACDVWDFFKPDMSSEYPRV 218
            VGIL  +VYFPST+V+Q DLE AN VSAGKYTIGLGQE MAFTGD EDINS+ LTVV  LLEKY++    +GR+EVGTETL+DKSKSTKT+LMSLF  SGN DIEG T VNACYGGTAALLNA+ WV+SS WDGRYAIVV  DIAVYA+GPARPTGGCG+VA+L+G +AP+ I+++TR   A  VWDFFKP++ SEYP V
Sbjct:   36 VGILGMEVYFPSTYVTQADLEKANNVSAGKYTIGLGQEIMAFTGDHEDINSIALTVVHSLLEKYNIDPRDVGRLEVGTETLVDKSKSTKTVLMSLFAPSGNTDIEGATVVNACYGGTAALLNALTWVDSSSWDGRYAIVVCGDIAVYADGPARPTGGCGSVAMLIGRNAPISIDLRTRTCSASHVWDFFKPNLHSEYPTV 235          
BLAST of mRNA_Ecto-sp9_F_contig9739.17839.1 vs.
Match: Hydroxymethylglutaryl-CoA (synthase n=1 Tax=Ixodes scapularis TaxID=6945 RepID=A0A6P7UPG9_IXOSC)

HSP 1 Score: 289 bits (739), Expect = 4.540e-96
Identity = 139/203 (68.47%), Postives = 166/203 (81.77%), Query Frame = 0
Query:   16 PDNVGILAADVYFPSTFVSQEDLEVANGVSAGKYTIGLGQEAMAFTGDREDINSMCLTVVAQLLEKYDVPKDRIGRIEVGTETLIDKSKSTKTILMSLFEDSGNDDIEGVTTVNACYGGTAALLNAVAWVESSGWDGRYAIVVAADIAVYAEGPARPTGGCGAVAVLVGPDAPLVINMKTRASYACDVWDFFKPDMSSEYPRV 218
            P++VG+LA ++YFP  +V Q +LEV +GVS GKYTIGLGQ  M F  DRED +S+CLTV ++LLE+  V  DRIGR+EVGTETL+DKSKS KT+LM LFE+SGN DIEGV T NACYGGTAAL NA AWVESS WDGRYA+VVAADIA YA GPARPTGG GAVA+LVGP+A L++    RAS+ C V+DF+KPD+ +EYPRV
Sbjct:   14 PEDVGVLAMELYFPFLYVDQTELEVFDGVSTGKYTIGLGQARMGFCSDREDTHSLCLTVTSRLLERTGVGLDRIGRLEVGTETLLDKSKSVKTVLMQLFEESGNTDIEGVDTTNACYGGTAALFNAAAWVESSAWDGRYALVVAADIAAYAIGPARPTGGAGAVAMLVGPNAALILEQGVRASHMCHVYDFYKPDLHTEYPRV 216          
BLAST of mRNA_Ecto-sp9_F_contig9739.17839.1 vs.
Match: Hydroxymethylglutaryl-CoA (synthase (Fragment) n=1 Tax=Phytophthora palmivora var. palmivora TaxID=611791 RepID=A0A2P4X3F4_9STRA)

HSP 1 Score: 286 bits (733), Expect = 1.760e-95
Identity = 134/204 (65.69%), Postives = 172/204 (84.31%), Query Frame = 0
Query:   15 RPDNVGILAADVYFPSTFVSQEDLEVANGVSAGKYTIGLGQEAMAFTGDREDINSMCLTVVAQLLEKYDVPKDRIGRIEVGTETLIDKSKSTKTILMSLFEDSGNDDIEGVTTVNACYGGTAALLNAVAWVESSGWDGRYAIVVAADIAVYAEGPARPTGGCGAVAVLVGPDAPLVINMKTRASYACDVWDFFKPDMSSEYPRV 218
            RP +VGILA +V+FP  +V Q ++E  +GV +GKYT+GLGQ  MA  GDRED+N++ LT V++LL K+ V  D++GR+EVGTETL+DKSKSTKT+LM LF D  N D++G T +NACYGGTAALLNAVAWVESS WDGRYAIVVA DIAVYA+GPARP+GGC AVA+L+GPDAP+V++ +T+A++A +VWDF+KP++SSEYP V
Sbjct:    6 RPSDVGILAMEVHFPLDYVDQSEMETFDGVDSGKYTLGLGQLGMAVPGDREDVNALALTAVSRLLSKFQVSPDQVGRLEVGTETLVDKSKSTKTVLMQLFGD--NADVDGATVINACYGGTAALLNAVAWVESSFWDGRYAIVVATDIAVYAKGPARPSGGCAAVAMLIGPDAPMVLDCRTKATHATNVWDFYKPNVSSEYPTV 207          
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp9_F_contig9739.17839.1 vs.
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Ectocarpus species9 EcSCA_722f female vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
Hydroxymethylglutaryl-CoA9.520e-14599.08synthase n=1 Tax=Ectocarpus siliculosus TaxID=2880... [more]
Hydroxymethylglutaryl-CoA1.940e-14498.10synthase (Fragment) n=1 Tax=Ectocarpus sp. CCAP 13... [more]
Hydroxymethylglutaryl-coenzyme1.710e-10377.88A synthase N terminal-domain-containing protein n=... [more]
Hydroxymethylglutaryl-CoA2.420e-10374.26synthase (Fragment) n=1 Tax=Spumella elongata TaxI... [more]
Hydroxymethylglutaryl-CoA2.460e-9873.27synthase (Fragment) n=1 Tax=Phaeomonas parva TaxID... [more]
Hydroxymethylglutaryl-CoA9.690e-9870.79synthase (Fragment) n=1 Tax=Pinguiococcus pyrenoid... [more]
Uncharacterized1.200e-9773.08protein n=2 Tax=Monodopsidaceae TaxID=425072 RepID... [more]
Hydroxymethylglutaryl-CoA2.030e-9672.50synthase (Fragment) n=1 Tax=archaeon TaxID=1906665... [more]
Hydroxymethylglutaryl-CoA4.540e-9668.47synthase n=1 Tax=Ixodes scapularis TaxID=6945 RepI... [more]
Hydroxymethylglutaryl-CoA1.760e-9565.69synthase (Fragment) n=1 Tax=Phytophthora palmivora... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0 of Ectocarpus species9 EcSCA_722f female
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR010122Hydroxymethylglutaryl-CoA synthase, eukaryoticTIGRFAMTIGR01833TIGR01833coord: 16..218
e-value: 3.3E-107
score: 357.3
IPR016039Thiolase-likeGENE3D3.40.47.10coord: 12..218
e-value: 1.2E-92
score: 313.1
IPR016039Thiolase-likeSUPERFAMILY53901Thiolase-likecoord: 18..186
IPR013528Hydroxymethylglutaryl-coenzyme A synthase, N-terminalPFAMPF01154HMG_CoA_synt_Ncoord: 15..188
e-value: 1.9E-85
score: 285.1
IPR013746Hydroxymethylglutaryl-coenzyme A synthase C-terminal domainPFAMPF08540HMG_CoA_synt_Ccoord: 190..218
e-value: 2.9E-6
score: 27.1
NoneNo IPR availablePANTHERPTHR43323:SF23-HYDROXY-3-METHYLGLUTARYL COENZYME A SYNTHASEcoord: 18..218
NoneNo IPR availablePANTHERPTHR43323FAMILY NOT NAMEDcoord: 18..218

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp9_F_contig9739contigEcto-sp9_F_contig9739:2266..4914 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Ectocarpus species9 EcSCA_722f female2022-09-29
Diamond blastp: OGS1.0 of Ectocarpus species9 EcSCA_722f female vs UniRef902022-09-16
OGS1.0 of Ectocarpus species9 EcSCA_722f female2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp9_F_contig9739.17839.1mRNA_Ecto-sp9_F_contig9739.17839.1Ectocarpus species9 EcSCA_722f femalemRNAEcto-sp9_F_contig9739 2261..4914 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp9_F_contig9739.17839.1 ID=prot_Ecto-sp9_F_contig9739.17839.1|Name=mRNA_Ecto-sp9_F_contig9739.17839.1|organism=Ectocarpus species9 EcSCA_722f female|type=polypeptide|length=218bp
MSVPAPAGGGGGEGRPDNVGILAADVYFPSTFVSQEDLEVANGVSAGKYT
IGLGQEAMAFTGDREDINSMCLTVVAQLLEKYDVPKDRIGRIEVGTETLI
DKSKSTKTILMSLFEDSGNDDIEGVTTVNACYGGTAALLNAVAWVESSGW
DGRYAIVVAADIAVYAEGPARPTGGCGAVAVLVGPDAPLVINMKTRASYA
CDVWDFFKPDMSSEYPRV
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR010122HMG_CoA_synthase_euk
IPR016039Thiolase-like
IPR013528HMG_CoA_synth_N
IPR013746HMG_CoA_synt_C_dom