prot_Ecto-sp9_F_contig9732.17834.1 (polypeptide) Ectocarpus species9 EcSCA_722f female

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp9_F_contig9732.17834.1
Unique Nameprot_Ecto-sp9_F_contig9732.17834.1
Typepolypeptide
OrganismEctocarpus species9 EcSCA_722f female (Ectocarpus species9 EcSCA_722f female)
Sequence length203
Homology
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BLAST of mRNA_Ecto-sp9_F_contig9732.17834.1 vs.
Match: Complex1_LYR_dom (domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JB99_9PHAE)

HSP 1 Score: 252 bits (643), Expect = 3.410e-82
Identity = 154/185 (83.24%), Postives = 157/185 (84.86%), Query Frame = 0 
Query:    1 MLCCTQRIKPGYGGRMLRDAREVFREGRHTSNARPRAAPFRSASTMQQCAAASGTESTVAVWSCVDPWTGRPRSSXXXXXXXXXXXXXXXXXXXXXXXXKVGG------GLGLKEFMHRARVLELYRGILKRARALEDKDVADEARRQFQSCLGETDPLKVQMMVVDATNHLEAMQGSTRGAGSG 179
            MLCCT+RIKPG GGRMLRD+ E FREG HT NARPR APFRSASTMQQCAAA GTEST AVWSCVDPWTGRPR      XXXXXXXXXXXXXXXXX  X           LGLKEFMHRARVLELYRGILKRARALEDKDVADEARRQF+SCLGETDPLKVQMMV DATNHLEAMQGSTRGAGSG
Sbjct:    1 MLCCTKRIKPGCGGRMLRDSTEAFREGSHTKNARPRVAPFRSASTMQQCAAACGTESTAAVWSCVDPWTGRPRPRSSSSXXXXXXXXXXXXXXXXXGSXXXXXXXXXXXALGLKEFMHRARVLELYRGILKRARALEDKDVADEARRQFKSCLGETDPLKVQMMVADATNHLEAMQGSTRGAGSG 185
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BLAST of mRNA_Ecto-sp9_F_contig9732.17834.1 vs.
Match: Complex1_LYR_dom (domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LRC8_ECTSI)

HSP 1 Score: 129 bits (325), Expect = 1.480e-35
Identity = 66/69 (95.65%), Postives = 68/69 (98.55%), Query Frame = 0 
Query:  111 MHRARVLELYRGILKRARALEDKDVADEARRQFQSCLGETDPLKVQMMVVDATNHLEAMQGSTRGAGSG 179
            MHRARVLELYRGILKRARALEDKDVADEAR+QF+SCLGETDPLKVQMMV DATNHLEAMQGSTRGAGSG
Sbjct:    1 MHRARVLELYRGILKRARALEDKDVADEARKQFKSCLGETDPLKVQMMVADATNHLEAMQGSTRGAGSG 69
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BLAST of mRNA_Ecto-sp9_F_contig9732.17834.1 vs.
Match: LYR (motif-containing protein 2 n=2 Tax=Cyclopterus lumpus TaxID=8103 RepID=A0A8C3AAP9_CYCLU)

HSP 1 Score: 53.9 bits (128), Expect = 4.850e-6
Identity = 32/78 (41.03%), Postives = 47/78 (60.26%), Query Frame = 0 
Query:  105 LGLKEFMHRARVLELYRGILKRARALED----KDVADEARRQFQSCLGETDPLKVQMMVVDATNHLEAMQGSTRGAGS 178
            L LK+F+ R RVL +YR +++  R + D    K ++D AR +F+     TD   ++MM+  A NHLE +QGS   AGS
Sbjct:   42 LSLKQFLQRQRVLGIYRNMIRTIRKVPDEADRKYLSDWARDEFKRNKSATDQDAIRMMITQANNHLEELQGSLALAGS 119
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp9_F_contig9732.17834.1 vs.
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Ectocarpus species9 EcSCA_722f female vs UniRef90)
Total hits: 3
Match NameE-valueIdentityDescription
Complex1_LYR_dom3.410e-8283.24domain-containing protein n=1 Tax=Ectocarpus sp. C... [more]
Complex1_LYR_dom1.480e-3595.65domain-containing protein n=1 Tax=Ectocarpus silic... [more]
LYR4.850e-641.03motif-containing protein 2 n=2 Tax=Cyclopterus lum... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp9_F_contig9732contigEcto-sp9_F_contig9732:13..2705 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Ectocarpus species9 EcSCA_722f female2022-09-29
Diamond blastp: OGS1.0 of Ectocarpus species9 EcSCA_722f female vs UniRef902022-09-16
OGS1.0 of Ectocarpus species9 EcSCA_722f female2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp9_F_contig9732.17834.1mRNA_Ecto-sp9_F_contig9732.17834.1Ectocarpus species9 EcSCA_722f femalemRNAEcto-sp9_F_contig9732 13..2764 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp9_F_contig9732.17834.1 ID=prot_Ecto-sp9_F_contig9732.17834.1|Name=mRNA_Ecto-sp9_F_contig9732.17834.1|organism=Ectocarpus species9 EcSCA_722f female|type=polypeptide|length=203bp
MLCCTQRIKPGYGGRMLRDAREVFREGRHTSNARPRAAPFRSASTMQQCA
AASGTESTVAVWSCVDPWTGRPRSSSSSSNRSSSSSSGSGGGGGGGGGGK
VGGGLGLKEFMHRARVLELYRGILKRARALEDKDVADEARRQFQSCLGET
DPLKVQMMVVDATNHLEAMQGSTRGAGSGGGGGATRGWIFTTRRTSGGGS
EGV
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