prot_Ecto-sp9_F_contig9728.17831.1 (polypeptide) Ectocarpus species9 EcSCA_722f female
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Overview
Homology
BLAST of mRNA_Ecto-sp9_F_contig9728.17831.1 vs.
Match: Lissencephaly-1 (homolog n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G1C0_ECTSI) HSP 1 Score: 245 bits (625), Expect = 1.040e-76 Identity = 124/137 (90.51%), Postives = 125/137 (91.24%), Query Frame = 0
Query: 31 VVESVAFAPESAERTLATAVGSAGXXXXXXXXAVRRRFVASGSRDKTVKLWNASVGHCLMTFSVHENWVRCVLVHPSGAFVLSASDDRSVRAFDVKTGRCARKLEDAHGHFVTALAMHKTSPIVVSGGVDRELHVWE 167
VVES+AFAPESAER LATAVGS G AVRRRFVASGSRDKTVKLWNASVGHCLMTFSVHENWVRCVLVHPSGAFVLSASDDRSVRAFDVKTGRCARKLEDAHGH VTALAMHKTSPIVVSGGVD ELHVWE
Sbjct: 288 VVESIAFAPESAERALATAVGSEGGGGGEG--AVRRRFVASGSRDKTVKLWNASVGHCLMTFSVHENWVRCVLVHPSGAFVLSASDDRSVRAFDVKTGRCARKLEDAHGHLVTALAMHKTSPIVVSGGVDGELHVWE 422
BLAST of mRNA_Ecto-sp9_F_contig9728.17831.1 vs.
Match: Uncharacterized (protein n=1 Tax=Pythium oligandrum TaxID=41045 RepID=A0A8K1CCN7_PYTOL) HSP 1 Score: 169 bits (429), Expect = 6.860e-48 Identity = 80/180 (44.44%), Postives = 115/180 (63.89%), Query Frame = 0
Query: 2 LASCGNDHSVKVWSVHSGQCLHDLREHTHVVESVAFAPESAERT---------LATAVGS----AGXXXXXXXXAVRRRFVASGSRDKTVKLWNASVGHCLMTFSVHENWVRCVLVHPSGAFVLSASDDRSVRAFDVKTGRCARKLEDAHGHFVTALAMHKTSPIVVSGGVDRELHVWEC 168
LASCGND ++ W + + L LREH HVVESV FA + LA+ VG+ A + +F+ SGSRD+TV+LW A G LM F+ HENWVRCV HP G +V+S ++D+++R FD++TGRC R +++AHGHF+T+L +H T P++V+G +D+ ++VWEC
Sbjct: 247 LASCGNDRAILFWDLQHHRVLQALREHDHVVESVVFAKSGPQEQAIEKFLAPKLASVVGAPLDAANGSAELSAGPRKVKFILSGSRDRTVRLWEAFSGTMLMNFASHENWVRCVRFHPCGKYVVSVAEDKTIRVFDIETGRCVRTVDEAHGHFLTSLDVHPTLPLMVTGSIDKLINVWEC 426
BLAST of mRNA_Ecto-sp9_F_contig9728.17831.1 vs.
Match: Hypothetical (protein n=1 Tax=Helicotheca tamesis TaxID=374047 RepID=A0A7S2MUP0_9STRA) HSP 1 Score: 160 bits (405), Expect = 4.870e-47 Identity = 78/173 (45.09%), Postives = 110/173 (63.58%), Query Frame = 0
Query: 1 MLASCGNDHSVKVWSVHSGQCLHDLREHTHVVESVAFAPESAERTLATAVGSAGXXXXXXXXAVRRR------FVASGSRDKTVKLWNASVGHCLMTFSVHENWVRCVLVHPSGAFVLSASDDRSVRAFDVKTGRCARKLEDAHGHFVTALAMHKTSPIVVSGGVDRELHVWE 167
+LA+ GND + V+ S + L +LR H HV+ES+AF +A T+ A RRR ++ASGSRD+TVKLW+ CLM+F HENWVR VL+HP+G F++S DD+S+R +D+K RC R ++ AH HFVT++AMH T P++VSGGVD+ + W+
Sbjct: 14 LLATSGNDRVIMVYDAESRKKLCELRGHDHVIESLAFLTCAA-----TSAADAPKSATKLTPEERRRKEEIRDYLASGSRDRTVKLWSIKAASCLMSFESHENWVRGVLIHPNGKFLISCGDDKSIRVYDIKANRCLRTIDGAHSHFVTSIAMHHTLPVLVSGGVDQSVKCWQ 181
BLAST of mRNA_Ecto-sp9_F_contig9728.17831.1 vs.
Match: Lissencephaly-1 (homolog n=1 Tax=Pythium brassicum TaxID=1485010 RepID=A0A5D6Y4C8_9STRA) HSP 1 Score: 167 bits (423), Expect = 9.430e-47 Identity = 82/192 (42.71%), Postives = 115/192 (59.90%), Query Frame = 0
Query: 2 LASCGNDHSVKVWSVHSGQCLHDLREHTHVVESVAFAPESA-----ERTLATAVGSAGXXXXXXXXAV--------------------RRRFVASGSRDKTVKLWNASVGHCLMTFSVHENWVRCVLVHPSGAFVLSASDDRSVRAFDVKTGRCARKLEDAHGHFVTALAMHKTSPIVVSGGVDRELHVWEC 168
LASCGND S+ W + + L +REH HVVESVAFA A ER A + + G A R +F+ SGSRD+TV+LW A G LM F+ HENWVRCV HP G +V+S ++DR++R +D++TGRC R L++AH HF+T+ +H + P++V+GG+D+ ++VWEC
Sbjct: 264 LASCGNDRSILFWDLQHMRVLQAIREHEHVVESVAFARSGAQEQAVERAHAKKLAAVGAVLGNGDAAAGGGTGPHVAADVGDVGAGSRRVKFLVSGSRDRTVRLWEAFSGALLMNFASHENWVRCVRFHPCGKYVISVAEDRTLRVYDIETGRCVRTLDEAHAHFLTSADVHPSLPLIVTGGIDKVINVWEC 455
BLAST of mRNA_Ecto-sp9_F_contig9728.17831.1 vs.
Match: Lissencephaly-1 (homolog n=2 Tax=Pythium insidiosum TaxID=114742 RepID=A0A2D4CDK0_PYTIN) HSP 1 Score: 165 bits (417), Expect = 6.060e-46 Identity = 79/186 (42.47%), Postives = 113/186 (60.75%), Query Frame = 0
Query: 2 LASCGNDHSVKVWSVHSGQCLHDLREHTHVVESVAFAPESAER-----------------TLATAVGSAGXXXXXXXXAVRRR--FVASGSRDKTVKLWNASVGHCLMTFSVHENWVRCVLVHPSGAFVLSASDDRSVRAFDVKTGRCARKLEDAHGHFVTALAMHKTSPIVVSGGVDRELHVWEC 168
LASCGND S+ W + + L LREH HVVESV FA A+ + TA+ +G A R+ F+ SGSRD+TV+LW A LM+FS HENWVRCV HP G + +S ++DR++R D++TGRC R ++ AH HF+T+L +H + P++++GG+D+ ++VWEC
Sbjct: 261 LASCGNDRSILFWDLQHHRVLQSLREHEHVVESVVFAKSGAQEQAIEKFHAQKLVTVSSPSSETALNGSGSTTDAAHVASPRKIKFLLSGSRDRTVRLWEAFSATMLMSFSSHENWVRCVRFHPCGRYAVSVAEDRTIRVHDIETGRCVRTVDQAHEHFLTSLDIHASLPLMITGGIDKHINVWEC 446
BLAST of mRNA_Ecto-sp9_F_contig9728.17831.1 vs.
Match: Platelet-activating (factor acetylhydrolase ib subunit alpha n=2 Tax=Monodopsidaceae TaxID=425072 RepID=W7TVA4_9STRA) HSP 1 Score: 160 bits (405), Expect = 2.930e-44 Identity = 82/178 (46.07%), Postives = 108/178 (60.67%), Query Frame = 0
Query: 1 MLASCGNDHSVKVWSVHSGQCLHDLREHTHVVESVAFAPESAERTL------ATAVGSAGXXXXXXXXA---VRRRFVASGSRDKTVKLWNASVGHCLMTFSVHENWVRCVLVHPSGAFVLSASDDRSVRAFDVKTGRCARKLEDAHGHFVTALAMHKTSPIVVSGGVDRELHVWECR 169
+LAS G+D V VW++ + + LREH+HVVE+VAF P + +T +GS + ++ SGSRDKT+ LWNA G CL+ + HENWVR V HPSG F+LS SDDRS+R FD+ RC R L DAH FV+ALA H T P + +G V+RE+ +WECR
Sbjct: 260 LLASGGSDRLVAVWALDTCAPVAVLREHSHVVEAVAFPPPGVAVKIDGNKGGSTGLGSENGEASAGLQSQGSAEEAYLVSGSRDKTIMLWNARTGQCLLRLADHENWVRSVRFHPSGQFLLSVSDDRSLRVFDIAKARCIRSLPDAHEQFVSALAQHPTLPYLATGSVNREIKLWECR 437
BLAST of mRNA_Ecto-sp9_F_contig9728.17831.1 vs.
Match: Ge1_WD40 (domain-containing protein (Fragment) n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JKZ3_9PHAE) HSP 1 Score: 151 bits (381), Expect = 6.730e-42 Identity = 79/94 (84.04%), Postives = 79/94 (84.04%), Query Frame = 0
Query: 33 ESVAFAPESAERTLATAVGSAGXXXXXXXXAVRRRFVASGSRDKTVKLWNASVGHCLMTFSVHENWVRCVLVHPSGAFVLSASDDRSVRAFDVK 126
ESVAFAPESAERTLATAVG RFVASGSRDKTVKLWNASVGHCLMTFSVHENWVRCVLVHPSGAFVLSASDDRSVRAFDVK
Sbjct: 224 ESVAFAPESAERTLATAVG---------------RFVASGSRDKTVKLWNASVGHCLMTFSVHENWVRCVLVHPSGAFVLSASDDRSVRAFDVK 302
BLAST of mRNA_Ecto-sp9_F_contig9728.17831.1 vs.
Match: Lissencephaly-1 (homolog n=1 Tax=Amphiprora paludosa TaxID=265537 RepID=A0A7S2Y8Q0_9STRA) HSP 1 Score: 154 bits (390), Expect = 8.080e-42 Identity = 77/167 (46.11%), Postives = 105/167 (62.87%), Query Frame = 0
Query: 3 ASCGNDHSVKVWSVHSGQCLH--DLREHTHVVESVAFAPESAERTLATAVGSAGXXXXXXXXAVRRRFVASGSRDKTVKLWNASVGHCLMTFSVHENWVRCVLVHPSGAFVLSASDDRSVRAFDVKTGRCARKLEDAHGHFVTALAMHKTSPIVVSGGVDRELHVWE 167
AS GND ++V+ + + L LR H HV+E++AF E T+ G G R ++ASG RD+TV+LWN C+ FS HENWVR VL+HPSG +++SA+DD+S+R FD+K RC R LE+AH HFVTA+ MH T PI+VSG VD+ + W+
Sbjct: 306 ASAGNDQVIRVYEQDNTKSLPLATLRGHEHVIEALAFICEQ------TSGGKLGMKSTSNADTNPRDYLASGGRDRTVRLWNLMDESCMAVFSSHENWVRAVLIHPSGQYIVSAADDKSIRVFDIKAQRCLRSLENAHDHFVTAIDMHSTLPILVSGSVDQTVKCWQ 466
BLAST of mRNA_Ecto-sp9_F_contig9728.17831.1 vs.
Match: Platelet-activating (factor acetylhydrolase beta subunit-like protein (Fragment) n=1 Tax=Thalassiosira pseudonana TaxID=35128 RepID=B8C7T8_THAPS) HSP 1 Score: 148 bits (373), Expect = 1.720e-39 Identity = 77/153 (50.33%), Postives = 97/153 (63.40%), Query Frame = 0
Query: 24 DLREHTHVVESVAFAPES--------AERTLATAVGSAGXXXXXXXXAVRRRFVASGSRDKTVKLWN-ASVGHCLMTFSVHENWVRCVLVHPSGAFVLSASDDRSVRAFDVKTGRCARKLEDAHGHFVTALAMHKTSPIVVSGGVDRELHVWE 167
+LR H HVVES++F S A R +A A ++ASGSRD+TV+LW A+ G CLMTF HENWVR VL+HPSG +LS DDRS+R FD+K+ RC R +EDAH HFVT++AMH T PI+VSGGVD + W+
Sbjct: 302 ELRGHDHVVESLSFLCSSLLPKKGSAASRPTTSAAEGASSSW---------EYLASGSRDRTVRLWTVANGGSCLMTFRAHENWVRGVLIHPSGNHILSCGDDRSIRVFDIKSNRCLRTIEDAHPHFVTSMAMHYTLPILVSGGVDHAVKCWQ 445
BLAST of mRNA_Ecto-sp9_F_contig9728.17831.1 vs.
Match: Hypothetical (protein n=1 Tax=Lotharella oceanica TaxID=641309 RepID=A0A7S2TW91_9EUKA) HSP 1 Score: 137 bits (346), Expect = 3.640e-38 Identity = 72/178 (40.45%), Postives = 107/178 (60.11%), Query Frame = 0
Query: 3 ASCGNDHSVKVWSVHSGQCLHDLREHTHVVESVAFAPESAERTLATAV----GS-------AGXXXXXXXXAVRRRFVASGSRDKTVKLWNASVGHCLMTFSVHENWVRCVLVHPSGAFVLSASDDRSVRAFDV-KTGRCARKLEDAHGHFVTALAMHKTSPIVVSGGVDRELHVWEC 168
ASC DH+V+VW + L R+H HVV+++AF+ E A++ L V GS AG + +F+AS SRDKT+K+++ G + + HENWVR VL HPSG ++LS +DD+++R +D+ K RC + LEDAH FVT + + + P++ SGGVD + +WEC
Sbjct: 1 ASCSIDHTVRVWDFKKAEELITFRDHKHVVDAIAFSHERADKVLLKHVQGTNGSKEAETKTAGVKSTETSSSYTPQFIASASRDKTIKIFHIPSGAIVADINGHENWVRGVLFHPSGKYLLSCADDQTIRVWDLEKRFRCRKILEDAHDPFVTCIDWNMSRPVLASGGVDNIMKIWEC 178 The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp9_F_contig9728.17831.1 vs.
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Ectocarpus species9 EcSCA_722f female vs UniRef90) Total hits: 25
Pagesback to topInterPro
Analysis Name: InterProScan on OGS1.0 of Ectocarpus species9 EcSCA_722f female
Date Performed: 2022-09-29
Alignments
The following features are aligned
Analyses
This polypeptide is derived from or has results from the following analyses
Relationships
This polypeptide derives from the following mRNA feature(s):
Sequences
The following sequences are available for this feature:
polypeptide sequence >prot_Ecto-sp9_F_contig9728.17831.1 ID=prot_Ecto-sp9_F_contig9728.17831.1|Name=mRNA_Ecto-sp9_F_contig9728.17831.1|organism=Ectocarpus species9 EcSCA_722f female|type=polypeptide|length=170bpback to top |