prot_Ecto-sp9_F_contig9725.17828.1 (polypeptide) Ectocarpus species9 EcSCA_722f female

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp9_F_contig9725.17828.1
Unique Nameprot_Ecto-sp9_F_contig9725.17828.1
Typepolypeptide
OrganismEctocarpus species9 EcSCA_722f female (Ectocarpus species9 EcSCA_722f female)
Sequence length67
Homology
BLAST of mRNA_Ecto-sp9_F_contig9725.17828.1 vs.
Match: Uncharacterized (protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K566_9PHAE)

HSP 1 Score: 115 bits (287), Expect = 2.490e-28
Identity = 53/65 (81.54%), Postives = 56/65 (86.15%), Query Frame = 0
Query:    1 MDESYTHFGTQYGEECWCTGSLGTTETSTACTYSCDGNPGEICGGFDALSVYEIVSETTPPTDDP 65
            MD SYTHFGTQYGEECWCTGSLGTTETSTACTY C GN GE CGGFDAL++YEI+SE  PPT  P
Sbjct:  388 MDSSYTHFGTQYGEECWCTGSLGTTETSTACTYPCAGNAGETCGGFDALTLYEIISEA-PPTPAP 451          
BLAST of mRNA_Ecto-sp9_F_contig9725.17828.1 vs.
Match: WSC (domain containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FL81_ECTSI)

HSP 1 Score: 107 bits (266), Expect = 1.570e-27
Identity = 50/67 (74.63%), Postives = 56/67 (83.58%), Query Frame = 0
Query:    1 MDESYTHFGTQYGEECWCTGSLGTTETSTACTYSCDGNPGEICGGFDALSVYEIVSETT-PPTDDPT 66
             D+S THFGTQYGEECWCTGSLGTTETS+ACT  C GN  E CGGFDALS+YEIV++T+ PPT  PT
Sbjct:   89 QDDSNTHFGTQYGEECWCTGSLGTTETSSACTMDCAGNSAETCGGFDALSMYEIVADTSSPPTPAPT 155          
BLAST of mRNA_Ecto-sp9_F_contig9725.17828.1 vs.
Match: WSC (domain containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G5F7_ECTSI)

HSP 1 Score: 106 bits (265), Expect = 1.590e-26
Identity = 50/65 (76.92%), Postives = 53/65 (81.54%), Query Frame = 0
Query:    1 MDESYTHFGTQYGEECWCTGSLGTTETSTACTYSCDGNPGEICGGFDALSVYEIVSETTPPTDDP 65
            MD SYTHFGTQYG ECWCTGSLG+TETSTACT  C GN  E CGGFDAL++YEIVSE  PPT  P
Sbjct:  163 MDASYTHFGTQYGNECWCTGSLGSTETSTACTMDCAGNTAETCGGFDALTLYEIVSEA-PPTPAP 226          
BLAST of mRNA_Ecto-sp9_F_contig9725.17828.1 vs.
Match: Uncharacterized (protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KH26_9PHAE)

HSP 1 Score: 101 bits (251), Expect = 2.000e-23
Identity = 45/53 (84.91%), Postives = 48/53 (90.57%), Query Frame = 0
Query:   15 ECWCTGSLGTTETSTACTYSCDGNPGEICGGFDALSVYEIVSETTPPTDDPTP 67
            +CWCT SLGTTETSTACTY C GNPGE CGGFDALS+Y+IVS TTPPTDDPTP
Sbjct:    5 QCWCTASLGTTETSTACTYPCAGNPGETCGGFDALSLYKIVSVTTPPTDDPTP 57          
BLAST of mRNA_Ecto-sp9_F_contig9725.17828.1 vs.
Match: Uncharacterized (protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K6V8_9PHAE)

HSP 1 Score: 100 bits (249), Expect = 2.030e-23
Identity = 44/49 (89.80%), Postives = 44/49 (89.80%), Query Frame = 0
Query:    1 MDESYTHFGTQYGEECWCTGSLGTTETSTACTYSCDGNPGEICGGFDAL 49
            MD SYTHFGTQYGEECWCTGSLGTTETSTACTY C GN GE CGGFDAL
Sbjct:  388 MDSSYTHFGTQYGEECWCTGSLGTTETSTACTYPCAGNAGETCGGFDAL 436          
BLAST of mRNA_Ecto-sp9_F_contig9725.17828.1 vs.
Match: WSC (domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K384_9PHAE)

HSP 1 Score: 85.1 bits (209), Expect = 8.820e-18
Identity = 39/51 (76.47%), Postives = 43/51 (84.31%), Query Frame = 0
Query:   15 ECWCTGSLGTTETSTACTYSCDGNPGEICGGFDALSVYEIVSETTPPTDDP 65
            +CWCTGSLGTTETSTACTY C GN GE CGGFDAL++YEI+SE  PPT  P
Sbjct:  387 QCWCTGSLGTTETSTACTYPCAGNAGETCGGFDALTLYEIISEA-PPTPAP 436          
BLAST of mRNA_Ecto-sp9_F_contig9725.17828.1 vs.
Match: Uncharacterized (protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JNN6_9PHAE)

HSP 1 Score: 73.6 bits (179), Expect = 1.100e-13
Identity = 34/53 (64.15%), Postives = 42/53 (79.25%), Query Frame = 0
Query:   15 ECWCTGSLGTTETSTACTYSCDGNPGEICGGFDALSVYEIVSETTPPTDDPTP 67
            EC+CTGSLG T++STA +Y+C GN GE+CG   A++VYEI S  T PTDDPTP
Sbjct:  509 ECFCTGSLGATQSSTAYSYACAGNSGELCGRLYAMTVYEIGSVATSPTDDPTP 561          
BLAST of mRNA_Ecto-sp9_F_contig9725.17828.1 vs.
Match: Uncharacterized (protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KQ76_9PHAE)

HSP 1 Score: 73.6 bits (179), Expect = 1.100e-13
Identity = 31/49 (63.27%), Postives = 35/49 (71.43%), Query Frame = 0
Query:    6 THFGTQYGEECWCTGSLGTTETSTACTYSCDGNPGEICGGFDALSVYEI 54
            THFGTQYG EC+CT  LG +  ST CTY C GNP E CGGFD ++ Y I
Sbjct:  348 THFGTQYGNECFCTDVLGESAVSTDCTYDCIGNPDETCGGFDRITAYRI 396          
BLAST of mRNA_Ecto-sp9_F_contig9725.17828.1 vs.
Match: Uncharacterized (protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FMV1_ECTSI)

HSP 1 Score: 71.6 bits (174), Expect = 5.240e-13
Identity = 30/49 (61.22%), Postives = 34/49 (69.39%), Query Frame = 0
Query:    6 THFGTQYGEECWCTGSLGTTETSTACTYSCDGNPGEICGGFDALSVYEI 54
            THFGTQYG EC+CT  L  +  ST CTY C GNP E CGGFD ++ Y I
Sbjct:  402 THFGTQYGNECFCTDVLRESAVSTGCTYECRGNPDETCGGFDMITAYRI 450          
BLAST of mRNA_Ecto-sp9_F_contig9725.17828.1 vs.
Match: WSC (domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KUX7_9PHAE)

HSP 1 Score: 58.2 bits (139), Expect = 8.820e-9
Identity = 28/58 (48.28%), Postives = 35/58 (60.34%), Query Frame = 0
Query:    2 DESYTHFGTQYGEECWC-----TGSLGTTETSTACTYSCDGNPGEICGGFDALSVYEI 54
            D + THFGTQYGEECWC         G  +  + C + C GN  E CGGFD ++VY+I
Sbjct:   78 DGTNTHFGTQYGEECWCGIHPALARHGELDIDS-CDFPCAGNEEETCGGFDKMTVYDI 134          
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp9_F_contig9725.17828.1 vs.
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Ectocarpus species9 EcSCA_722f female vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
Uncharacterized2.490e-2881.54protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=... [more]
WSC1.570e-2774.63domain containing protein n=1 Tax=Ectocarpus silic... [more]
WSC1.590e-2676.92domain containing protein n=1 Tax=Ectocarpus silic... [more]
Uncharacterized2.000e-2384.91protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=... [more]
Uncharacterized2.030e-2389.80protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=... [more]
WSC8.820e-1876.47domain-containing protein n=1 Tax=Ectocarpus sp. C... [more]
Uncharacterized1.100e-1364.15protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=... [more]
Uncharacterized1.100e-1363.27protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=... [more]
Uncharacterized5.240e-1361.22protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 ... [more]
WSC8.820e-948.28domain-containing protein n=1 Tax=Ectocarpus sp. C... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0 of Ectocarpus species9 EcSCA_722f female
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR002889Carbohydrate-binding WSCPFAMPF01822WSCcoord: 3..45
e-value: 3.8E-8
score: 33.4
IPR002889Carbohydrate-binding WSCPROSITEPS51212WSCcoord: 1..55
score: 8.177
NoneNo IPR availablePANTHERPTHR24269FAMILY NOT NAMEDcoord: 2..61
NoneNo IPR availablePANTHERPTHR24269:SF19coord: 2..61

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp9_F_contig9725contigEcto-sp9_F_contig9725:3494..3935 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Ectocarpus species9 EcSCA_722f female2022-09-29
Diamond blastp: OGS1.0 of Ectocarpus species9 EcSCA_722f female vs UniRef902022-09-16
OGS1.0 of Ectocarpus species9 EcSCA_722f female2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp9_F_contig9725.17828.1mRNA_Ecto-sp9_F_contig9725.17828.1Ectocarpus species9 EcSCA_722f femalemRNAEcto-sp9_F_contig9725 3494..3935 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp9_F_contig9725.17828.1 ID=prot_Ecto-sp9_F_contig9725.17828.1|Name=mRNA_Ecto-sp9_F_contig9725.17828.1|organism=Ectocarpus species9 EcSCA_722f female|type=polypeptide|length=67bp
MDESYTHFGTQYGEECWCTGSLGTTETSTACTYSCDGNPGEICGGFDALS
VYEIVSETTPPTDDPTP
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR002889WSC_carb-bd