prot_Ecto-sp9_F_contig9718.17820.1 (polypeptide) Ectocarpus species9 EcSCA_722f female

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview


Name	mRNA_Ecto-sp9_F_contig9718.17820.1
Unique Name	prot_Ecto-sp9_F_contig9718.17820.1
Type	polypeptide
Organism	Ectocarpus species9 EcSCA_722f female (Ectocarpus species9 EcSCA_722f female)
Sequence length	199

Homology

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BLAST of mRNA_Ecto-sp9_F_contig9718.17820.1 vs.
Match: Uncharacterized (protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LFI6_ECTSI)

HSP 1 Score: 281 bits (718), Expect = 5.450e-84
Identity = 143/144 (99.31%), Postives = 143/144 (99.31%), Query Frame = 0

Query:   15 QLRVSAIRLMHIVMVTKPEAFMETDVLKDARTRCISLFFKSLTSRADQVVDAAQAALVQVIFTNRQFKDKSGMPKDLLQSCLRPVLKNLTHIQKLSLPLLQGLSRLLYLLSNWFNVTLGDKLFGYLRQWTEPQKLQTLPDPKAW 158
            QLRVSAIRLMHIVMVTKPEAFMETDVLKDARTRCISLFFKSLTSRADQVVDAAQAALVQVIFTNRQFKDKSGMPKDLLQSCLRPVLKNLTHIQKLSLPLLQGLSRLLYLLSNWFNVTLGDKLFGYLRQWTEPQKLQTLPDPK W
Sbjct: 1674 QLRVSAIRLMHIVMVTKPEAFMETDVLKDARTRCISLFFKSLTSRADQVVDAAQAALVQVIFTNRQFKDKSGMPKDLLQSCLRPVLKNLTHIQKLSLPLLQGLSRLLYLLSNWFNVTLGDKLFGYLRQWTEPQKLQTLPDPKGW 1817

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BLAST of mRNA_Ecto-sp9_F_contig9718.17820.1 vs.
Match: FAT (domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KAF7_9PHAE)

HSP 1 Score: 276 bits (705), Expect = 3.040e-82
Identity = 140/144 (97.22%), Postives = 142/144 (98.61%), Query Frame = 0

Query:   15 QLRVSAIRLMHIVMVTKPEAFMETDVLKDARTRCISLFFKSLTSRADQVVDAAQAALVQVIFTNRQFKDKSGMPKDLLQSCLRPVLKNLTHIQKLSLPLLQGLSRLLYLLSNWFNVTLGDKLFGYLRQWTEPQKLQTLPDPKAW 158
            QLRVSAIRLMHIVM+TKPEAFMETDVLKDARTRCISLFFKSLTSRADQVVDAAQAALVQVIFTNRQFKDKSGMPKDLLQSCLRPVLKNLTHIQKLSLPLLQGLSRLLYLLSNWFNVTLGDKLFGYLRQWTEP+KLQ LPDPK W
Sbjct:  754 QLRVSAIRLMHIVMMTKPEAFMETDVLKDARTRCISLFFKSLTSRADQVVDAAQAALVQVIFTNRQFKDKSGMPKDLLQSCLRPVLKNLTHIQKLSLPLLQGLSRLLYLLSNWFNVTLGDKLFGYLRQWTEPEKLQGLPDPKGW 897

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BLAST of mRNA_Ecto-sp9_F_contig9718.17820.1 vs.
Match: Uncharacterized (protein (Fragment) n=2 Tax=Aphanomyces astaci TaxID=112090 RepID=A0A397ESV8_9STRA)

HSP 1 Score: 121 bits (303), Expect = 2.780e-28
Identity = 66/138 (47.83%), Postives = 98/138 (71.01%), Query Frame = 0

Query:   15 QLRVSAIRLMHIVMVTKPEAFMETDVL---KDARTRCISLFFKSLTSRADQVVDAAQAALVQVIFTNRQFKDKSGMPKDLLQSCLRPVLKNLTHIQKLSLPLLQGLSRLLYLLSNWFNVTLGDKLFGYLRQWTEPQKL 149
            QLR++AI+L+         AF+  + L   +DAR R + +FFK LT +  ++VD AQ AL  V+  N++ +++S +PK+LLQ CLRPVL NL   +KL++PLL+GL+RLL LLSN FNVTLG+KL  +L+QW +P+++
Sbjct:  123 QLRIAAIQLLR-------AAFVNDETLNQHQDARNRFVGIFFKFLTGQPKELVDCAQKALTDVVIMNKRNQERS-LPKELLQQCLRPVLLNLADYRKLTIPLLEGLARLLALLSNCFNVTLGEKLLEHLKQWRDPERI 252

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BLAST of mRNA_Ecto-sp9_F_contig9718.17820.1 vs.
Match: Uncharacterized (protein (Fragment) n=3 Tax=Aphanomyces astaci TaxID=112090 RepID=A0A418C387_9STRA)

HSP 1 Score: 121 bits (303), Expect = 3.050e-28
Identity = 66/138 (47.83%), Postives = 98/138 (71.01%), Query Frame = 0

Query:   15 QLRVSAIRLMHIVMVTKPEAFMETDVL---KDARTRCISLFFKSLTSRADQVVDAAQAALVQVIFTNRQFKDKSGMPKDLLQSCLRPVLKNLTHIQKLSLPLLQGLSRLLYLLSNWFNVTLGDKLFGYLRQWTEPQKL 149
            QLR++AI+L+         AF+  + L   +DAR R + +FFK LT +  ++VD AQ AL  V+  N++ +++S +PK+LLQ CLRPVL NL   +KL++PLL+GL+RLL LLSN FNVTLG+KL  +L+QW +P+++
Sbjct: 1647 QLRIAAIQLLR-------AAFVNDETLNQHQDARNRFVGIFFKFLTGQPKELVDCAQKALTDVVIMNKRNQERS-LPKELLQQCLRPVLLNLADYRKLTIPLLEGLARLLALLSNCFNVTLGEKLLEHLKQWRDPERI 1776

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BLAST of mRNA_Ecto-sp9_F_contig9718.17820.1 vs.
Match: Uncharacterized (protein n=2 Tax=Asparagus officinalis TaxID=4686 RepID=A0A5P1EAJ9_ASPOF)

HSP 1 Score: 121 bits (303), Expect = 3.070e-28
Identity = 71/149 (47.65%), Postives = 96/149 (64.43%), Query Frame = 0

Query:   10 ITTALQLRVSAIRLMHIVMVTKPEAFMETDVLKDARTRCISLFFKSLTSRADQVVDAAQAALVQVIFTNRQFKDKSGMPKDLLQSCLRPVLKNLTHIQKLSLPLLQGLSRLLYLLSNWFNVTLGDKLFGYLRQWTEPQKLQTLPDPKAW 158
            +TT  +LR + I L+   M  +    ++T +  + R++ IS+FFKSLT R  ++V  A+  L QVI        +  MPKDLLQS LRP+L NL H + L++PLLQGL+RLL LLSNWFNVTLG KL  +L++W EP+KL      KAW
Sbjct: 1194 VTTLNKLRTACIELLCTAMAWQD---LKTPIHSELRSKIISMFFKSLTCRTPEIVSVAKEGLRQVI-------QQQKMPKDLLQSSLRPILVNLAHTKSLNMPLLQGLARLLELLSNWFNVTLGVKLLDHLKKWLEPEKLAQTQ--KAW 1330

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BLAST of mRNA_Ecto-sp9_F_contig9718.17820.1 vs.
Match: Uncharacterized (protein (Fragment) n=2 Tax=Aphanomyces astaci TaxID=112090 RepID=A0A397DAI0_9STRA)

HSP 1 Score: 121 bits (303), Expect = 3.090e-28
Identity = 66/138 (47.83%), Postives = 98/138 (71.01%), Query Frame = 0

Query:   15 QLRVSAIRLMHIVMVTKPEAFMETDVL---KDARTRCISLFFKSLTSRADQVVDAAQAALVQVIFTNRQFKDKSGMPKDLLQSCLRPVLKNLTHIQKLSLPLLQGLSRLLYLLSNWFNVTLGDKLFGYLRQWTEPQKL 149
            QLR++AI+L+         AF+  + L   +DAR R + +FFK LT +  ++VD AQ AL  V+  N++ +++S +PK+LLQ CLRPVL NL   +KL++PLL+GL+RLL LLSN FNVTLG+KL  +L+QW +P+++
Sbjct: 1647 QLRIAAIQLLR-------AAFVNDETLNQHQDARNRFVGIFFKFLTGQPKELVDCAQKALTDVVIMNKRNQERS-LPKELLQQCLRPVLLNLADYRKLTIPLLEGLARLLALLSNCFNVTLGEKLLEHLKQWRDPERI 1776

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BLAST of mRNA_Ecto-sp9_F_contig9718.17820.1 vs.
Match: Uncharacterized (protein n=4 Tax=Aphanomyces astaci TaxID=112090 RepID=A0A3R7BKN8_9STRA)

HSP 1 Score: 121 bits (303), Expect = 3.090e-28
Identity = 66/138 (47.83%), Postives = 98/138 (71.01%), Query Frame = 0

Query:   15 QLRVSAIRLMHIVMVTKPEAFMETDVL---KDARTRCISLFFKSLTSRADQVVDAAQAALVQVIFTNRQFKDKSGMPKDLLQSCLRPVLKNLTHIQKLSLPLLQGLSRLLYLLSNWFNVTLGDKLFGYLRQWTEPQKL 149
            QLR++AI+L+         AF+  + L   +DAR R + +FFK LT +  ++VD AQ AL  V+  N++ +++S +PK+LLQ CLRPVL NL   +KL++PLL+GL+RLL LLSN FNVTLG+KL  +L+QW +P+++
Sbjct: 1654 QLRIAAIQLLR-------AAFVNDETLNQHQDARNRFVGIFFKFLTGQPKELVDCAQKALTDVVIMNKRNQERS-LPKELLQQCLRPVLLNLADYRKLTIPLLEGLARLLALLSNCFNVTLGEKLLEHLKQWRDPERI 1783

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BLAST of mRNA_Ecto-sp9_F_contig9718.17820.1 vs.
Match: Uncharacterized (protein n=1 Tax=Salvia splendens TaxID=180675 RepID=A0A4D8ZWG2_SALSN)

HSP 1 Score: 120 bits (302), Expect = 4.190e-28
Identity = 74/148 (50.00%), Postives = 94/148 (63.51%), Query Frame = 0

Query:   11 TTALQLRVSAIRLMHIVMVTKPEAFMETDVLKDARTRCISLFFKSLTSRADQVVDAAQAALVQVIFTNRQFKDKSGMPKDLLQSCLRPVLKNLTHIQKLSLPLLQGLSRLLYLLSNWFNVTLGDKLFGYLRQWTEPQKLQTLPDPKAW 158
            T+  +LR + I L+   M     A  +T    D R + IS+FFKSLTSR+ ++V  A+  L QVI   R       MPK+LLQS LRP+L NL H + LS+PLLQGL+RLL LLSNWFNVTLG KL  +L++W EP+KL      KAW
Sbjct: 1353 TSLNKLRTACIELLCTAMAW---ADFKTQNHSDLRAKVISMFFKSLTSRSPEIVAVAKEGLRQVILQQR-------MPKELLQSSLRPILVNLAHTKNLSMPLLQGLARLLELLSNWFNVTLGGKLLEHLKKWLEPEKLALTQ--KAW 1488

[Close]

BLAST of mRNA_Ecto-sp9_F_contig9718.17820.1 vs.
Match: Uncharacterized (protein n=3 Tax=Aphanomyces invadans TaxID=157072 RepID=A0A024UM79_9STRA)

HSP 1 Score: 120 bits (302), Expect = 4.210e-28
Identity = 66/138 (47.83%), Postives = 98/138 (71.01%), Query Frame = 0

Query:   15 QLRVSAIRLMHIVMVTKPEAFMETDVL---KDARTRCISLFFKSLTSRADQVVDAAQAALVQVIFTNRQFKDKSGMPKDLLQSCLRPVLKNLTHIQKLSLPLLQGLSRLLYLLSNWFNVTLGDKLFGYLRQWTEPQKL 149
            QLR++AI+L+         AF+  D L   +D+R R + +FF+ LT +  ++VD AQ AL  V+  N++ +++S +PK+LLQ CLRPVL NL   +KL++PLL+GLSRLL LLSN FNVTLG+KL  +L+QW +P+++
Sbjct: 1665 QLRIAAIQLLR-------AAFVNDDTLNQHQDSRNRFVGVFFRFLTGQPKELVDCAQKALTDVVIMNKRNQERS-LPKELLQQCLRPVLLNLADYRKLTIPLLEGLSRLLGLLSNCFNVTLGEKLLEHLKQWRDPERI 1794

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BLAST of mRNA_Ecto-sp9_F_contig9718.17820.1 vs.
Match: Uncharacterized (protein n=3 Tax=Aphanomyces astaci TaxID=112090 RepID=W4G9L1_9STRA)

HSP 1 Score: 120 bits (302), Expect = 4.210e-28
Identity = 66/138 (47.83%), Postives = 98/138 (71.01%), Query Frame = 0

Query:   15 QLRVSAIRLMHIVMVTKPEAFMETDVL---KDARTRCISLFFKSLTSRADQVVDAAQAALVQVIFTNRQFKDKSGMPKDLLQSCLRPVLKNLTHIQKLSLPLLQGLSRLLYLLSNWFNVTLGDKLFGYLRQWTEPQKL 149
            QLR++AI+L+         AF+  + L   +DAR R + +FFK LT +  ++VD AQ AL  V+  N++ +++S +PK+LLQ CLRPVL NL   +KL++PLL+GL+RLL LLSN FNVTLG+KL  +L+QW +P+++
Sbjct: 1649 QLRIAAIQLLR-------AAFVNDETLNQHQDARNRFVGVFFKFLTGQPKELVDCAQKALTDVVIMNKRNQERS-LPKELLQQCLRPVLLNLADYRKLTIPLLEGLARLLALLSNCFNVTLGEKLLEHLKQWRDPERI 1778

The following BLAST results are available for this feature:

BLAST of mRNA_Ecto-sp9_F_contig9718.17820.1 vs.

BLAST of mRNA_Ecto-sp9_F_contig9718.17820.1 vs.
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Ectocarpus species9 EcSCA_722f female vs UniRef90)
Total hits: 25


Match Name	E-value	Identity	Description
Uncharacterized	5.450e-84	99.31	protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 ...	[more]
FAT	3.040e-82	97.22	domain-containing protein n=1 Tax=Ectocarpus sp. C...	[more]
Uncharacterized	2.780e-28	47.83	protein (Fragment) n=2 Tax=Aphanomyces astaci TaxI...	[more]
Uncharacterized	3.050e-28	47.83	protein (Fragment) n=3 Tax=Aphanomyces astaci TaxI...	[more]
Uncharacterized	3.070e-28	47.65	protein n=2 Tax=Asparagus officinalis TaxID=4686 R...	[more]
Uncharacterized	3.090e-28	47.83	protein (Fragment) n=2 Tax=Aphanomyces astaci TaxI...	[more]
Uncharacterized	3.090e-28	47.83	protein n=4 Tax=Aphanomyces astaci TaxID=112090 Re...	[more]
Uncharacterized	4.190e-28	50.00	protein n=1 Tax=Salvia splendens TaxID=180675 RepI...	[more]
Uncharacterized	4.210e-28	47.83	protein n=3 Tax=Aphanomyces invadans TaxID=157072 ...	[more]
Uncharacterized	4.210e-28	47.83	protein n=3 Tax=Aphanomyces astaci TaxID=112090 Re...	[more]

Pages

InterPro

Analysis Name: InterProScan on OGS1.0 of Ectocarpus species9 EcSCA_722f female
Date Performed: 2022-09-29


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	PANTHER	PTHR11139	ATAXIA TELANGIECTASIA MUTATED ATM -RELATED	coord: 19..151
None	No IPR available	PHOBIUS	SIGNAL_PEPTIDE_N_REGION	Signal peptide N-region	coord: 1..2
None	No IPR available	PHOBIUS	SIGNAL_PEPTIDE_H_REGION	Signal peptide H-region	coord: 3..14
None	No IPR available	PHOBIUS	NON_CYTOPLASMIC_DOMAIN	Non cytoplasmic domain	coord: 21..199
None	No IPR available	PHOBIUS	SIGNAL_PEPTIDE	Signal Peptide	coord: 1..20
None	No IPR available	PHOBIUS	SIGNAL_PEPTIDE_C_REGION	Signal peptide C-region	coord: 15..20
None	No IPR available	SIGNALP_EUK	SignalP-noTM	SignalP-noTM	coord: 1..20 score: 0.597
IPR033317	Transcription-associated protein 1	PANTHER	PTHR11139:SF1	TRANSFORMATION/TRANSCRIPTION DOMAIN-ASSOCIATED PROTEIN	coord: 19..151

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
Ecto-sp9_F_contig9718	contig	Ecto-sp9_F_contig9718:1769..3170 +

Analyses

This polypeptide is derived from or has results from the following analyses


Analysis Name	Date Performed
InterProScan on OGS1.0 of Ectocarpus species9 EcSCA_722f female	2022-09-29
Diamond blastp: OGS1.0 of Ectocarpus species9 EcSCA_722f female vs UniRef90	2022-09-16
OGS1.0 of Ectocarpus species9 EcSCA_722f female	2021-02-24

Relationships

This polypeptide derives from the following mRNA feature(s):


Feature Name	Unique Name	Species	Type	Position
mRNA_Ecto-sp9_F_contig9718.17820.1	mRNA_Ecto-sp9_F_contig9718.17820.1	Ectocarpus species9 EcSCA_722f female	mRNA	Ecto-sp9_F_contig9718 1769..3171 +

Sequences

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>prot_Ecto-sp9_F_contig9718.17820.1 ID=prot_Ecto-sp9_F_contig9718.17820.1|Name=mRNA_Ecto-sp9_F_contig9718.17820.1|organism=Ectocarpus species9 EcSCA_722f female|type=polypeptide|length=199bp
YICAFLFAAITTALQLRVSAIRLMHIVMVTKPEAFMETDVLKDARTRCIS
LFFKSLTSRADQVVDAAQAALVQVIFTNRQFKDKSGMPKDLLQSCLRPVL
KNLTHIQKLSLPLLQGLSRLLYLLSNWFNVTLGDKLFGYLRQWTEPQKLQ
TLPDPKAWMEARRGTRRGGRHNGTLPPPAALPEVLGPARQAHAAARNGS

Annotated Terms

The following terms have been associated with this polypeptide:

Vocabulary: **INTERPRO**
Term	Definition
IPR033317	TRA1/TRRAP