prot_Ecto-sp9_F_contig971.17815.1 (polypeptide) Ectocarpus species9 EcSCA_722f female

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp9_F_contig971.17815.1
Unique Nameprot_Ecto-sp9_F_contig971.17815.1
Typepolypeptide
OrganismEctocarpus species9 EcSCA_722f female (Ectocarpus species9 EcSCA_722f female)
Sequence length837
Homology
[Close]
BLAST of mRNA_Ecto-sp9_F_contig971.17815.1 vs.
Match: Uncharacterized (protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FT47_ECTSI)

HSP 1 Score: 1358 bits (3516), Expect = 0.000e+0
Identity = 778/837 (92.95%), Postives = 787/837 (94.03%), Query Frame = 0 
Query:    1 MVDYSKWDNLDSDDSDSGSDGAXXXXXXKQQPPSARKAADDKRQLDQAEALRLQGNSAYELGDVSKAIAAYDAQLRVLEGRKDEAAVEMTCGALLNQASGFISLKKFKEAEARCSRLLASATPRGGTKAYGGAEARTRALHFRGFARLRLGLFDGACSDLRSSLAAGTSSGDEARALLLEAEAGAAMSSCPDPEAEGREHLRQGRGREAAKSFRDAASRALRRKDAAGAEAGEGAVATTVALSRNLRLEGIAVAMAGDPPSAEMLLRAALRELRVEGGGGRXXXXXXXXXXE-GLTLAALGSLLAQRGKHADALKPLREAVAVLDEAIAGVSANEGGAANSSAGTNAGSSPPTPSTTEGRITALTRTLTGTLAFLGTSLLAPDVQPNANYGSSXXXXXXXXXXXGVTPGVMKEGAEKVTVPAPGFSCDDKGPIVADSGAARSSKEADEAIDVLKRAHEMLKAETVAMAAAGPGQKGGPAGVYSAVGESRGEADVRKQTAKVLDTLSEAYGREKRWERARSATEQSLTAWRSLGVAGRVGAAASLLSLGHLLLQLHGVGAGFEEASARWEEAATCFKDCAERPSVEAEVRLKIAGYYTKVALSDPARLESVEGKISAHYSEAAVLFARERDEKTSSLKRAAEAVAAAQAPRDKMAEGSGSAEPVPPLPPPFADSLEPDGRSRWELAEQEAFAWEGYAGAAGDNHEAAVTALAKAEKLLDHASVSDKDERWTLWKVGVLHSLALALARSGEHAMAENKLLEAIRELQELDGVDSKAEACAHKGTLTDLYKYLAIARRARGDLPGAKEALAKVETLGGCEGREELEGLNRLLAESAVSVG 836
            MVDYSKWDNLDSDDS SGSDG XXXXXX    PSARKAADDKRQLDQAEALRLQGNSAYELGDVSKAIAAYDAQLRVLEGRKDEAAVEMTCGALLNQASGFISLKKFKEAEARCSRLLASATPRGGTKAYGGAEARTRALHFRGFAR RLGLFDGACSDLRSSLAAGTSSGDEARALLLEAEAGAAMSSCPDPEAEGREHLRQGRGREAAKSFRDAASRA RRKDAAGAEAGEGAVATTVALSRNLRLEGIAVAMAGDPPSAEMLLR ALR+LRV G    XXXXXXXXX E GLTLAALGSLLAQRGKHADAL+PLREAVAVLDEAIAGVSANEGG ANSSAGTNA SSPPTPS TEGRITALTRTLTGTLAFLGTSLLAP+VQP+ANYGS+           GVTPGVMK GAEKVTVPAPGFSCDDKGPIVADSG A SSKEADEAIDVLKRAHEMLKAETVAMA AGPGQKGG AGVYSAVGESRGEADVRKQTAKVLDTLSEAYGREKRWERAR A EQSLTAWRSLGVAGRVGAAASLLSLGHLLLQLHGVGAGFEEASARWEEAATCFK CAERPSVEAEVRLKIAGYYTKVA SDPARLES+EGKISAHYSEAAVLFARERDEKTSSLKRAAEAVAAAQAPRDK AEGSGSAEPVPPLPPP  DSLEPDGRSRWELAEQEAFAWEGYAGAAG++HEAAVTALAKAEKLLDHASVSDKDERWTL KVGVLHSLALALARSGEHAMAENKLLEAIRELQ+LDGVDS AEAC HKGTLTDLYKYLAI RRARGD  GAK ALAKVETLGGCEG EELEGLNRLLAESAVSVG
Sbjct:    1 MVDYSKWDNLDSDDSGSGSDGXXXXXXXXXXXPSARKAADDKRQLDQAEALRLQGNSAYELGDVSKAIAAYDAQLRVLEGRKDEAAVEMTCGALLNQASGFISLKKFKEAEARCSRLLASATPRGGTKAYGGAEARTRALHFRGFARFRLGLFDGACSDLRSSLAAGTSSGDEARALLLEAEAGAAMSSCPDPEAEGREHLRQGRGREAAKSFRDAASRARRRKDAAGAEAGEGAVATTVALSRNLRLEGIAVAMAGDPPSAEMLLRTALRDLRVGGXXXXXXXXXXXXXEEEGLTLAALGSLLAQRGKHADALEPLREAVAVLDEAIAGVSANEGGVANSSAGTNARSSPPTPSITEGRITALTRTLTGTLAFLGTSLLAPEVQPSANYGSNGSSTTTTSSG-GVTPGVMKGGAEKVTVPAPGFSCDDKGPIVADSGEAGSSKEADEAIDVLKRAHEMLKAETVAMATAGPGQKGGLAGVYSAVGESRGEADVRKQTAKVLDTLSEAYGREKRWERARLAAEQSLTAWRSLGVAGRVGAAASLLSLGHLLLQLHGVGAGFEEASARWEEAATCFKGCAERPSVEAEVRLKIAGYYTKVARSDPARLESLEGKISAHYSEAAVLFARERDEKTSSLKRAAEAVAAAQAPRDKTAEGSGSAEPVPPLPPPLVDSLEPDGRSRWELAEQEAFAWEGYAGAAGEDHEAAVTALAKAEKLLDHASVSDKDERWTLRKVGVLHSLALALARSGEHAMAENKLLEAIRELQQLDGVDSIAEACVHKGTLTDLYKYLAIVRRARGDFAGAKAALAKVETLGGCEGSEELEGLNRLLAESAVSVG 836
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp9_F_contig971.17815.1 vs.
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Ectocarpus species9 EcSCA_722f female vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
Uncharacterized0.000e+092.95protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FT47... [more]
back to top
InterPro
Analysis Name: InterProScan on OGS1.0 of Ectocarpus species9 EcSCA_722f female
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 442..462
NoneNo IPR availablePANTHERPTHR46423FAMILY NOT NAMEDcoord: 2..168
IPR019734Tetratricopeptide repeatSMARTSM00028tpr_5coord: 498..531
e-value: 320.0
score: 1.8
coord: 733..766
e-value: 87.0
score: 6.7
coord: 137..170
e-value: 260.0
score: 2.5
coord: 48..81
e-value: 2.1
score: 17.3
coord: 293..326
e-value: 73.0
score: 7.4
IPR011990Tetratricopeptide-like helical domain superfamilyGENE3D1.25.40.10coord: 32..163
e-value: 4.4E-13
score: 51.1
IPR011990Tetratricopeptide-like helical domain superfamilySUPERFAMILY48452TPR-likecoord: 47..597

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp9_F_contig971contigEcto-sp9_F_contig971:3516..12623 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Ectocarpus species9 EcSCA_722f female2022-09-29
Diamond blastp: OGS1.0 of Ectocarpus species9 EcSCA_722f female vs UniRef902022-09-16
OGS1.0 of Ectocarpus species9 EcSCA_722f female2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp9_F_contig971.17815.1mRNA_Ecto-sp9_F_contig971.17815.1Ectocarpus species9 EcSCA_722f femalemRNAEcto-sp9_F_contig971 3425..13324 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp9_F_contig971.17815.1 ID=prot_Ecto-sp9_F_contig971.17815.1|Name=mRNA_Ecto-sp9_F_contig971.17815.1|organism=Ectocarpus species9 EcSCA_722f female|type=polypeptide|length=837bp
MVDYSKWDNLDSDDSDSGSDGAAAAAKTKQQPPSARKAADDKRQLDQAEA
LRLQGNSAYELGDVSKAIAAYDAQLRVLEGRKDEAAVEMTCGALLNQASG
FISLKKFKEAEARCSRLLASATPRGGTKAYGGAEARTRALHFRGFARLRL
GLFDGACSDLRSSLAAGTSSGDEARALLLEAEAGAAMSSCPDPEAEGREH
LRQGRGREAAKSFRDAASRALRRKDAAGAEAGEGAVATTVALSRNLRLEG
IAVAMAGDPPSAEMLLRAALRELRVEGGGGRVGGGGGAVEEEGLTLAALG
SLLAQRGKHADALKPLREAVAVLDEAIAGVSANEGGAANSSAGTNAGSSP
PTPSTTEGRITALTRTLTGTLAFLGTSLLAPDVQPNANYGSSSTTTTTTS
SSGGVTPGVMKEGAEKVTVPAPGFSCDDKGPIVADSGAARSSKEADEAID
VLKRAHEMLKAETVAMAAAGPGQKGGPAGVYSAVGESRGEADVRKQTAKV
LDTLSEAYGREKRWERARSATEQSLTAWRSLGVAGRVGAAASLLSLGHLL
LQLHGVGAGFEEASARWEEAATCFKDCAERPSVEAEVRLKIAGYYTKVAL
SDPARLESVEGKISAHYSEAAVLFARERDEKTSSLKRAAEAVAAAQAPRD
KMAEGSGSAEPVPPLPPPFADSLEPDGRSRWELAEQEAFAWEGYAGAAGD
NHEAAVTALAKAEKLLDHASVSDKDERWTLWKVGVLHSLALALARSGEHA
MAENKLLEAIRELQELDGVDSKAEACAHKGTLTDLYKYLAIARRARGDLP
GAKEALAKVETLGGCEGREELEGLNRLLAESAVSVG*
back to top
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR019734TPR_repeat
IPR011990TPR-like_helical_dom_sf