mRNA_Ecto-sp9_F_contig971.17815.1 (mRNA) Ectocarpus species9 EcSCA_722f female
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Overview
Homology
BLAST of mRNA_Ecto-sp9_F_contig971.17815.1 vs.
Match: Uncharacterized (protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FT47_ECTSI) HSP 1 Score: 1359 bits (3517), Expect = 0.000e+0 Identity = 778/837 (92.95%), Postives = 787/837 (94.03%), Query Frame = 2
Query: 92 MVDYSKWDNLDSDDSDSGSDGAXXXXXXKQQPPSARKAADDKRQLDQAEALRLQGNSAYELGDVSKAIAAYDAQLRVLEGRKDEAAVEMTCGALLNQASGFISLKKFKEAEARCSRLLASATPRGGTKAYGGAEARTRALHFRGFARLRLGLFDGACSDLRSSLAAGTSSGDEARALLLEAEAGAAMSSCPDPEAEGREHLRQGRGREAAKSFRDAASRALRRKDAAGAEAGEGAVATTVALSRNLRLEGIAVAMAGDPPSAEMLLRAALRELRVEGGGGRXXXXXXXXXXE-GLTLAALGSLLAQRGKHADALKPLREAVAVLDEAIAGVSANEGGAANSSAGTNAGSSPPTPSTTEGRITALTRTLTGTLAFLGTSLLAPDVQPNANYGSSXXXXXXXXXXXGVTPGVMKEGAEKVTVPAPGFSCDDKGPIVADSGAARSSKEADEAIDVLKRAHEMLKAETVAMAAAGPGQKGGPAGVYSAVGESRGEADVRKQTAKVLDTLSEAYGREKRWERARSATEQSLTAWRSLGVAGRVGAAASLLSLGHLLLQLHGVGAGFEEASARWEEAATCFKDCAERPSVEAEVRLKIAGYYTKVALSDPARLESVEGKISAHYSEAAVLFARERDEKTSSLKRAAEAVAAAQAPRDKMAEGSGSAEPVPPLPPPFADSLEPDGRSRWELAEQEAFAWEGYAGAAGDNHEAAVTALAKAEKLLDHASVSDKDERWTLWKVGVLHSLALALARSGEHAMAENKLLEAIRELQELDGVDSKAEACAHKGTLTDLYKYLAIARRARGDLPGAKEALAKVETLGGCEGREELEGLNRLLAESAVSVG 2599
MVDYSKWDNLDSDDS SGSDG XXXXXX PSARKAADDKRQLDQAEALRLQGNSAYELGDVSKAIAAYDAQLRVLEGRKDEAAVEMTCGALLNQASGFISLKKFKEAEARCSRLLASATPRGGTKAYGGAEARTRALHFRGFAR RLGLFDGACSDLRSSLAAGTSSGDEARALLLEAEAGAAMSSCPDPEAEGREHLRQGRGREAAKSFRDAASRA RRKDAAGAEAGEGAVATTVALSRNLRLEGIAVAMAGDPPSAEMLLR ALR+LRV G XXXXXXXXX E GLTLAALGSLLAQRGKHADAL+PLREAVAVLDEAIAGVSANEGG ANSSAGTNA SSPPTPS TEGRITALTRTLTGTLAFLGTSLLAP+VQP+ANYGS+ GVTPGVMK GAEKVTVPAPGFSCDDKGPIVADSG A SSKEADEAIDVLKRAHEMLKAETVAMA AGPGQKGG AGVYSAVGESRGEADVRKQTAKVLDTLSEAYGREKRWERAR A EQSLTAWRSLGVAGRVGAAASLLSLGHLLLQLHGVGAGFEEASARWEEAATCFK CAERPSVEAEVRLKIAGYYTKVA SDPARLES+EGKISAHYSEAAVLFARERDEKTSSLKRAAEAVAAAQAPRDK AEGSGSAEPVPPLPPP DSLEPDGRSRWELAEQEAFAWEGYAGAAG++HEAAVTALAKAEKLLDHASVSDKDERWTL KVGVLHSLALALARSGEHAMAENKLLEAIRELQ+LDGVDS AEAC HKGTLTDLYKYLAI RRARGD GAK ALAKVETLGGCEG EELEGLNRLLAESAVSVG
Sbjct: 1 MVDYSKWDNLDSDDSGSGSDGXXXXXXXXXXXPSARKAADDKRQLDQAEALRLQGNSAYELGDVSKAIAAYDAQLRVLEGRKDEAAVEMTCGALLNQASGFISLKKFKEAEARCSRLLASATPRGGTKAYGGAEARTRALHFRGFARFRLGLFDGACSDLRSSLAAGTSSGDEARALLLEAEAGAAMSSCPDPEAEGREHLRQGRGREAAKSFRDAASRARRRKDAAGAEAGEGAVATTVALSRNLRLEGIAVAMAGDPPSAEMLLRTALRDLRVGGXXXXXXXXXXXXXEEEGLTLAALGSLLAQRGKHADALEPLREAVAVLDEAIAGVSANEGGVANSSAGTNARSSPPTPSITEGRITALTRTLTGTLAFLGTSLLAPEVQPSANYGSNGSSTTTTSSG-GVTPGVMKGGAEKVTVPAPGFSCDDKGPIVADSGEAGSSKEADEAIDVLKRAHEMLKAETVAMATAGPGQKGGLAGVYSAVGESRGEADVRKQTAKVLDTLSEAYGREKRWERARLAAEQSLTAWRSLGVAGRVGAAASLLSLGHLLLQLHGVGAGFEEASARWEEAATCFKGCAERPSVEAEVRLKIAGYYTKVARSDPARLESLEGKISAHYSEAAVLFARERDEKTSSLKRAAEAVAAAQAPRDKTAEGSGSAEPVPPLPPPLVDSLEPDGRSRWELAEQEAFAWEGYAGAAGEDHEAAVTALAKAEKLLDHASVSDKDERWTLRKVGVLHSLALALARSGEHAMAENKLLEAIRELQQLDGVDSIAEACVHKGTLTDLYKYLAIVRRARGDFAGAKAALAKVETLGGCEGSEELEGLNRLLAESAVSVG 836 The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp9_F_contig971.17815.1 vs.
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Ectocarpus species9 EcSCA_722f female vs UniRef90) Total hits: 1
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_Ecto-sp9_F_contig971.17815.1 >prot_Ecto-sp9_F_contig971.17815.1 ID=prot_Ecto-sp9_F_contig971.17815.1|Name=mRNA_Ecto-sp9_F_contig971.17815.1|organism=Ectocarpus species9 EcSCA_722f female|type=polypeptide|length=837bp MVDYSKWDNLDSDDSDSGSDGAAAAAKTKQQPPSARKAADDKRQLDQAEAback to top mRNA from alignment at Ecto-sp9_F_contig971:3425..13324+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_Ecto-sp9_F_contig971.17815.1 ID=mRNA_Ecto-sp9_F_contig971.17815.1|Name=mRNA_Ecto-sp9_F_contig971.17815.1|organism=Ectocarpus species9 EcSCA_722f female|type=mRNA|length=9900bp|location=Sequence derived from alignment at Ecto-sp9_F_contig971:3425..13324+ (Ectocarpus species9 EcSCA_722f female)back to top Coding sequence (CDS) from alignment at Ecto-sp9_F_contig971:3425..13324+ >mRNA_Ecto-sp9_F_contig971.17815.1 ID=mRNA_Ecto-sp9_F_contig971.17815.1|Name=mRNA_Ecto-sp9_F_contig971.17815.1|organism=Ectocarpus species9 EcSCA_722f female|type=CDS|length=5022bp|location=Sequence derived from alignment at Ecto-sp9_F_contig971:3425..13324+ (Ectocarpus species9 EcSCA_722f female)back to top |