prot_Ecto-sp9_F_contig9683.17787.1 (polypeptide) Ectocarpus species9 EcSCA_722f female
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Overview
Homology
BLAST of mRNA_Ecto-sp9_F_contig9683.17787.1 vs.
Match: Uncharacterized (protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G3C6_ECTSI) HSP 1 Score: 101 bits (251), Expect = 9.500e-24 Identity = 49/49 (100.00%), Postives = 49/49 (100.00%), Query Frame = 0
Query: 3 QVDAIIRSGLSRFTDEVGRLWCKLADYYIRLGQFERARDVYEEAINSVV 51
QVDAIIRSGLSRFTDEVGRLWCKLADYYIRLGQFERARDVYEEAINSVV
Sbjct: 173 QVDAIIRSGLSRFTDEVGRLWCKLADYYIRLGQFERARDVYEEAINSVV 221
BLAST of mRNA_Ecto-sp9_F_contig9683.17787.1 vs.
Match: Hypothetical (protein (Fragment) n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2F2U3_9STRA) HSP 1 Score: 94.4 bits (233), Expect = 2.190e-22 Identity = 43/50 (86.00%), Postives = 49/50 (98.00%), Query Frame = 0
Query: 2 VQVDAIIRSGLSRFTDEVGRLWCKLADYYIRLGQFERARDVYEEAINSVV 51
++VDAIIRSGL+RFTDEVGRLWCKLAD+YIRLGQFERARD+YEE IN+VV
Sbjct: 53 LKVDAIIRSGLARFTDEVGRLWCKLADFYIRLGQFERARDIYEEGINAVV 102
BLAST of mRNA_Ecto-sp9_F_contig9683.17787.1 vs.
Match: Uncharacterized (protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CA78_9STRA) HSP 1 Score: 95.1 bits (235), Expect = 1.640e-21 Identity = 48/56 (85.71%), Postives = 51/56 (91.07%), Query Frame = 0
Query: 3 QVDAIIRSGLSRFTDEVGRLWCKLADYYIRLGQFERARDVYEEAINSV--VRDRTI 56
QVDAIIRSGL+RFTDEVGRLWCKLADYYIRLGQFERARDVYEE I +V VRD T+
Sbjct: 177 QVDAIIRSGLTRFTDEVGRLWCKLADYYIRLGQFERARDVYEEGITTVITVRDFTM 232
BLAST of mRNA_Ecto-sp9_F_contig9683.17787.1 vs.
Match: Glycine--tRNA (ligase n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2W251_9STRA) HSP 1 Score: 94.7 bits (234), Expect = 2.480e-21 Identity = 44/50 (88.00%), Postives = 49/50 (98.00%), Query Frame = 0
Query: 2 VQVDAIIRSGLSRFTDEVGRLWCKLADYYIRLGQFERARDVYEEAINSVV 51
++VDAIIRSGL+RFTDEVGRLWCKLADYYIRLGQFERARDV+EE INSV+
Sbjct: 229 LKVDAIIRSGLARFTDEVGRLWCKLADYYIRLGQFERARDVFEEGINSVM 278
BLAST of mRNA_Ecto-sp9_F_contig9683.17787.1 vs.
Match: Pre-mRNA-splicing (factor SYF1 n=3 Tax=Monodopsidaceae TaxID=425072 RepID=K8YQA2_NANGC) HSP 1 Score: 90.1 bits (222), Expect = 1.040e-19 Identity = 44/57 (77.19%), Postives = 52/57 (91.23%), Query Frame = 0
Query: 2 VQVDAIIRSGLSRFTDEVGRLWCKLADYYIRLGQFERARDVYEEAINSV--VRDRTI 56
++VDAIIRSGL+RFTDE G+LWCKLADYYIR GQFERARDVYEEA+++V VRD T+
Sbjct: 247 LKVDAIIRSGLARFTDETGKLWCKLADYYIRQGQFERARDVYEEALSTVLTVRDFTM 303
BLAST of mRNA_Ecto-sp9_F_contig9683.17787.1 vs.
Match: Uncharacterized (protein n=1 Tax=Aureococcus anophagefferens TaxID=44056 RepID=F0Y7N0_AURAN) HSP 1 Score: 88.2 bits (217), Expect = 4.940e-19 Identity = 40/50 (80.00%), Postives = 46/50 (92.00%), Query Frame = 0
Query: 2 VQVDAIIRSGLSRFTDEVGRLWCKLADYYIRLGQFERARDVYEEAINSVV 51
+ VDA+IRSGL+RFTDEVG+LWCKLADYYIRLG FE ARDVYEEA+ +VV
Sbjct: 236 LDVDALIRSGLARFTDEVGKLWCKLADYYIRLGDFEDARDVYEEAVTTVV 285
BLAST of mRNA_Ecto-sp9_F_contig9683.17787.1 vs.
Match: Hypothetical (protein n=1 Tax=Pelagomonas calceolata TaxID=35677 RepID=A0A7S4A7Z3_9STRA) HSP 1 Score: 86.7 bits (213), Expect = 1.720e-18 Identity = 41/53 (77.36%), Postives = 46/53 (86.79%), Query Frame = 0
Query: 2 VQVDAIIRSGLSRFTDEVGRLWCKLADYYIRLGQFERARDVYEEAINSVVRDR 54
+ VD IIRSGLSRF DEVGRLWCKLADYYIRLG+FE AR+VYEEA+ +VV R
Sbjct: 295 LDVDQIIRSGLSRFRDEVGRLWCKLADYYIRLGRFEEARNVYEEAVTTVVTAR 347
BLAST of mRNA_Ecto-sp9_F_contig9683.17787.1 vs.
Match: Fand (protein n=1 Tax=Symbiodinium sp. KB8 TaxID=230985 RepID=A0A812ZM72_9DINO) HSP 1 Score: 85.5 bits (210), Expect = 4.380e-18 Identity = 38/50 (76.00%), Postives = 45/50 (90.00%), Query Frame = 0
Query: 2 VQVDAIIRSGLSRFTDEVGRLWCKLADYYIRLGQFERARDVYEEAINSVV 51
+ V+AIIRSGL RFTDEVGRLWC LADY+IRLG+FERARDVYEE + +V+
Sbjct: 221 LNVEAIIRSGLRRFTDEVGRLWCALADYFIRLGEFERARDVYEEGVQAVI 270
BLAST of mRNA_Ecto-sp9_F_contig9683.17787.1 vs.
Match: LOW (QUALITY PROTEIN: pre-mRNA-splicing factor SYF1-like n=1 Tax=Rhinopithecus bieti TaxID=61621 RepID=UPI00083C74B2) HSP 1 Score: 82.0 bits (201), Expect = 1.440e-17 Identity = 40/56 (71.43%), Postives = 47/56 (83.93%), Query Frame = 0
Query: 2 VQVDAIIRSGLSRFTDEVGRLWCKLADYYIRLGQFERARDVYEEAINSV--VRDRT 55
+ VDAIIR GL+RFTD++G+LWC LADYYIR G FE+ARDVYEEAI +V VRD T
Sbjct: 73 LNVDAIIRXGLTRFTDQLGKLWCSLADYYIRSGHFEKARDVYEEAIRTVMTVRDFT 128
BLAST of mRNA_Ecto-sp9_F_contig9683.17787.1 vs.
Match: Pre-mRNA-splicing (factor SYF1 (Fragment) n=1 Tax=Mus musculus TaxID=10090 RepID=F6TM12_MOUSE) HSP 1 Score: 82.4 bits (202), Expect = 1.540e-17 Identity = 40/56 (71.43%), Postives = 47/56 (83.93%), Query Frame = 0
Query: 2 VQVDAIIRSGLSRFTDEVGRLWCKLADYYIRLGQFERARDVYEEAINSV--VRDRT 55
+ VDAIIR GL+RFTD++G+LWC LADYYIR G FE+ARDVYEEAI +V VRD T
Sbjct: 225 LNVDAIIRGGLTRFTDQLGKLWCSLADYYIRSGHFEKARDVYEEAIRTVMTVRDFT 280 The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp9_F_contig9683.17787.1 vs.
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Ectocarpus species9 EcSCA_722f female vs UniRef90) Total hits: 25
Pagesback to topInterPro
Analysis Name: InterProScan on OGS1.0 of Ectocarpus species9 EcSCA_722f female
Date Performed: 2022-09-29
Alignments
The following features are aligned
Analyses
This polypeptide is derived from or has results from the following analyses
Relationships
This polypeptide derives from the following mRNA feature(s):
Sequences
The following sequences are available for this feature:
polypeptide sequence >prot_Ecto-sp9_F_contig9683.17787.1 ID=prot_Ecto-sp9_F_contig9683.17787.1|Name=mRNA_Ecto-sp9_F_contig9683.17787.1|organism=Ectocarpus species9 EcSCA_722f female|type=polypeptide|length=56bpback to top |