prot_Ecto-sp9_F_contig967.17771.1 (polypeptide) Ectocarpus species9 EcSCA_722f female

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp9_F_contig967.17771.1
Unique Nameprot_Ecto-sp9_F_contig967.17771.1
Typepolypeptide
OrganismEctocarpus species9 EcSCA_722f female (Ectocarpus species9 EcSCA_722f female)
Sequence length530
Homology
BLAST of mRNA_Ecto-sp9_F_contig967.17771.1 vs.
Match: Putative (type II topoisomerase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LST7_ECTSI)

HSP 1 Score: 452 bits (1164), Expect = 1.660e-151
Identity = 270/296 (91.22%), Postives = 273/296 (92.23%), Query Frame = 0
Query:   35 RTTKRSKKSSTADAPLLPQESAGSAGDGNNIAASTAEPSKYHPAAIAPSSTLRQCDGLNVVKNKARGRGRQLMVLPGALGLGNGSTGGKLGTLNNATPANPVLYVEFPEGRLKCTGRTVHAKGRFFTLYADKAAGRATRMDCRDVFDTAVFFSKACWVGKKEDNPSEEPLPLPESLQSLGGEDEQASGSGGXXXXXXXGGDAAPKLTAADFKTHFGGGNPASLMSGDSESKASAGXXXXXXXXXXXXXXXXXXXXXXXXXXGGATKTVGRRTSSRSTKSTKTYVEEDSDDGELEDG 330
            +TTKRSKKSS ADAPLLPQESAGSAGDGNN AASTAEPSKYHPAAIAPSSTLRQCDGLNVVKNKARGRGRQLMVLPGALGLGNGSTGGKLGTLNNATPANPVLY+EFPEGRLKCTGRTVHAKGRFFTLYADKAAGRATRMDCRDVFD+AVFFSKACWVGKKEDNPSEEPLPLPESLQSL GEDEQASG G XXXXXXX GDAAPKLTAADFKTHFGGGNPASLMSGDSESKASAG      XXXXXXXXXXXXXXXXXXXX   TKTVGRRTS        TYVEEDSDDGELEDG
Sbjct:   24 QTTKRSKKSSAADAPLLPQESAGSAGDGNNNAASTAEPSKYHPAAIAPSSTLRQCDGLNVVKNKARGRGRQLMVLPGALGLGNGSTGGKLGTLNNATPANPVLYMEFPEGRLKCTGRTVHAKGRFFTLYADKAAGRATRMDCRDVFDSAVFFSKACWVGKKEDNPSEEPLPLPESLQSLRGEDEQASGGGXXXXXXXXXGDAAPKLTAADFKTHFGGGNPASLMSGDSESKASAGNDAGNGXXXXXXXXXXXXXXXXXXXXXXXTKTVGRRTSXXXXXXXXTYVEEDSDDGELEDG 319          
BLAST of mRNA_Ecto-sp9_F_contig967.17771.1 vs.
Match: Uncharacterized (protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JPN3_9PHAE)

HSP 1 Score: 446 bits (1146), Expect = 1.090e-148
Identity = 275/331 (83.08%), Postives = 279/331 (84.29%), Query Frame = 0
Query:    1 MSKKRERDGGGSDTFQHDN-GAESLLFEIAPPPEDRTTKRSKKSSTADAPLLPQESAGSAGDGNNIAASTAEPSKYHPAAIAPSSTLRQCDGLNVVKNKARGRGRQLMVLPGALGLGNGSTGGKLGTLNNATPANPVLYVEFPEGRLKCTGRTVHAKGRFFTLYADKAAGRATRMDCRDVFDTAVFFSKACWVGKKEDNPSEEPLPLPESLQSLGGEDEQASGSGGXXXXXXXGGDAAPKLTAADFKTHFGGGNPASLMSGDSESKASAGXXXXXXXXXXXXXXXXXXXXXXXXXXGGATKTVGRRTSSRSTKSTKTYVEEDSDDGELEDG 330
            MS+KRERDGG  DTFQ D+ GAESLLFEIAPPPEDRT                               STAEPSKYHPAAIAPSSTLRQCDGLNVVKNKARGRGRQLMVLPG LGLGNGSTGGKLGTLNNA PANPVLYVEFPEGRLKCTGR VHAKGRFFTLYADKAAGRATRMDCRDVFD+AVFFSKACWVGKKEDNPSEEPLPLPESLQ+L GEDEQA GSGG       GGDAA KLTAADFKTHFGGGNPASLMSGDSESKASA XXXXXXXXXXXXXXXXXXXXXXXXX  GATKTVGRRTSSRSTKSTKTYVEEDS DGELEDG
Sbjct:    1 MSRKRERDGGDGDTFQQDSSGAESLLFEIAPPPEDRTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX-STAEPSKYHPAAIAPSSTLRQCDGLNVVKNKARGRGRQLMVLPGVLGLGNGSTGGKLGTLNNAAPANPVLYVEFPEGRLKCTGRMVHAKGRFFTLYADKAAGRATRMDCRDVFDSAVFFSKACWVGKKEDNPSEEPLPLPESLQTLRGEDEQAPGSGGDDGDATGGGDAAQKLTAADFKTHFGGGNPASLMSGDSESKASAXXXXXXXXXXXXXXXXXXXXXXXXXX--GATKTVGRRTSSRSTKSTKTYVEEDSSDGELEDG 328          
BLAST of mRNA_Ecto-sp9_F_contig967.17771.1 vs.
Match: Uncharacterized (protein n=1 Tax=Aegilops tauschii subsp. strangulata TaxID=200361 RepID=A0A453TDM3_AEGTS)

HSP 1 Score: 100 bits (248), Expect = 1.540e-20
Identity = 51/136 (37.50%), Postives = 81/136 (59.56%), Query Frame = 0
Query:   78 AAIAPSSTLRQCDGLNVVKNKARGRGRQLMVLPGALGLGNGSTGGKLGTLNNATPANPVLYVEFPEGRLKCTGRTVHAKGRFFTLYADKAAGRATRMDCRDVFDTAVFFSKACWVGKKEDNPSEEPLPLPESLQSL 213
            AA+ PS  + +  G ++V+ + + RGR L   PG   L   + GG++G L +    NPVLY+EFP+GR+K  G  V+ K ++ TL   ++A       C DVF++ + FS++ WVG KE+NP E  L  P+ +Q++
Sbjct:   45 AALPPSGAVARLQGRDIVRPRGQRRGRFLFSFPGL--LAPAAAGGRVGELADLGTKNPVLYLEFPQGRMKLLGTHVYPKNKYLTLQMTRSAKGVA---CEDVFESMIVFSESWWVGTKEENPDELKLEFPKEMQNV 175          
BLAST of mRNA_Ecto-sp9_F_contig967.17771.1 vs.
Match: Uncharacterized (protein n=1 Tax=Aegilops tauschii subsp. strangulata TaxID=200361 RepID=A0A453TD59_AEGTS)

HSP 1 Score: 100 bits (249), Expect = 2.400e-20
Identity = 54/147 (36.73%), Postives = 85/147 (57.82%), Query Frame = 0
Query:   78 AAIAPSSTLRQCDGLNVVKNKARGRGRQLMVLPGALGLGNGSTGGKLGTLNNATPANPVLYVEFPEGRLKCTGRTVHAKGRFFTLYADKAAGRATRMDCRDVFDTAVFFSKACWVGKKEDNPSEEPLPLPESLQSLGGEDEQASGSG 224
            AA+ PS  + +  G ++V+ + + RGR L   PG   L   + GG++G L +    NPVLY+EFP+GR+K  G  V+ K ++ TL   ++A       C DVF++ V FS++ WVG KE+NP E  L  P+ +Q+   + +   G+G
Sbjct:   45 AALPPSGAVARLQGRDIVRPRGQRRGRFLFSFPGL--LAPAAAGGRVGELADLGTKNPVLYLEFPQGRMKLLGTHVYPKNKYLTLQMTRSAKGVA---CEDVFESMVLFSESWWVGTKEENPDELKLEFPKEMQNAAEDVDFKGGAG 186          
BLAST of mRNA_Ecto-sp9_F_contig967.17771.1 vs.
Match: Hypothetical (protein n=2 Tax=Miscanthus lutarioriparius TaxID=422564 RepID=A0A811S6P0_9POAL)

HSP 1 Score: 103 bits (257), Expect = 3.970e-20
Identity = 54/137 (39.42%), Postives = 80/137 (58.39%), Query Frame = 0
Query:   78 AAIAPSSTLRQCDGLNVVKNKARGRGRQLMVLPGALGLGNGSTGGKLGTLNNATPANPVLYVEFPEGRLKCTGRTVHAKGRFFTLYADKAAGRATRMDCRDVFDTAVFFSKACWVGKKEDNPSEEPLPLPESLQSLG 214
            A +APS  + +  G +VV+   + + R L   PG   L   ++GG++G L +    NPVLY+EFP+GR+K  G  V+ K ++ TL   ++A       C DVF++ + FS+ACWVG KEDNP E  L  P+  Q+ G
Sbjct:   41 APLAPSGAVTRLQGRDVVRRGGQRKSRYLFSFPGL--LAPAASGGRIGELADLGTKNPVLYLEFPQGRMKLFGTHVYPKNKYLTLQMTRSAKGVV---CEDVFESLIVFSEACWVGTKEDNPEELKLEFPKEFQNDG 172          
BLAST of mRNA_Ecto-sp9_F_contig967.17771.1 vs.
Match: Uncharacterized (protein n=1 Tax=Triticum turgidum subsp. durum TaxID=4567 RepID=A0A446Z088_TRITD)

HSP 1 Score: 101 bits (251), Expect = 4.350e-20
Identity = 55/147 (37.41%), Postives = 86/147 (58.50%), Query Frame = 0
Query:   78 AAIAPSSTLRQCDGLNVVKNKARGRGRQLMVLPGALGLGNGSTGGKLGTLNNATPANPVLYVEFPEGRLKCTGRTVHAKGRFFTLYADKAAGRATRMDCRDVFDTAVFFSKACWVGKKEDNPSEEPLPLPESLQSLGGEDEQASGSG 224
            AA+ PS  + +  G ++V+ + + RGR L   PG L    G+ GG++G L +    NPVLY+EFP+GR+K  G  V+ K ++ TL   ++A       C DVF++ + FS+A WVG KE+NP E  L  P+ +Q+   + +   G+G
Sbjct:   43 AALPPSGAVVRLQGRDIVRPRGQRRGRFLFSFPGLLAPAAGA-GGRVGELADLGTKNPVLYLEFPQGRMKLLGTHVYPKNKYLTLQMTRSAKGVA---CEDVFESMIVFSEAWWVGTKEENPDELKLEFPKEMQNAAEDVDFKGGAG 185          
BLAST of mRNA_Ecto-sp9_F_contig967.17771.1 vs.
Match: Uncharacterized (protein n=1 Tax=Aphanomyces astaci TaxID=112090 RepID=W4FT72_9STRA)

HSP 1 Score: 99.0 bits (245), Expect = 2.290e-19
Identity = 54/134 (40.30%), Postives = 73/134 (54.48%), Query Frame = 0
Query:   79 AIAPSSTLRQCDGLNVVKNKARGRGRQLMVLPGALGLGNGSTGGKLGTLNNATPANPVLYVEFPEGRLKCTGRTVHAKGRFFTLYADKAAGRATRMDCRDVFDTAVFFSKACWVGKKEDNPSEEPLPLPESLQS 212
            AI  +  LR C G ++ K     +G+ L   PG   +     GG LGTL+      PVLY++FP+GRLK  G  V+A+ RF TL   + A R   + C DVFD  V F +  W+G  + NPSE PLP+P  L +
Sbjct:   26 AIPLARALRACHGQDIKKKSGHRKGKFLFAFPGL--VSPMPEGGTLGTLDKLDTDKPVLYIDFPQGRLKMQGTLVYAQNRFLTL---QCARRGKSVVCDDVFDAVVTFPEVSWIGPVDANPSEAPLPIPSFLHA 154          
BLAST of mRNA_Ecto-sp9_F_contig967.17771.1 vs.
Match: Uncharacterized (protein n=1 Tax=Aegilops tauschii subsp. strangulata TaxID=200361 RepID=A0A453TD71_AEGTS)

HSP 1 Score: 99.8 bits (247), Expect = 3.150e-19
Identity = 53/147 (36.05%), Postives = 85/147 (57.82%), Query Frame = 0
Query:   78 AAIAPSSTLRQCDGLNVVKNKARGRGRQLMVLPGALGLGNGSTGGKLGTLNNATPANPVLYVEFPEGRLKCTGRTVHAKGRFFTLYADKAAGRATRMDCRDVFDTAVFFSKACWVGKKEDNPSEEPLPLPESLQSLGGEDEQASGSG 224
            AA+ PS  + +  G ++V+ + + RGR L   PG   L   + GG++G L +    NPVLY+EFP+GR+K  G  V+ K ++ TL   ++A       C DVF++ + FS++ WVG KE+NP E  L  P+ +Q+   + +   G+G
Sbjct:   45 AALPPSGAVARLQGRDIVRPRGQRRGRFLFSFPGL--LAPAAAGGRVGELADLGTKNPVLYLEFPQGRMKLLGTHVYPKNKYLTLQMTRSAKGVA---CEDVFESMIVFSESWWVGTKEENPDELKLEFPKEMQNAAEDVDFKGGAG 186          
BLAST of mRNA_Ecto-sp9_F_contig967.17771.1 vs.
Match: Uncharacterized (protein (Fragment) n=1 Tax=Aphanomyces astaci TaxID=112090 RepID=A0A6A4ZWI6_9STRA)

HSP 1 Score: 97.8 bits (242), Expect = 3.990e-19
Identity = 52/127 (40.94%), Postives = 70/127 (55.12%), Query Frame = 0
Query:   86 LRQCDGLNVVKNKARGRGRQLMVLPGALGLGNGSTGGKLGTLNNATPANPVLYVEFPEGRLKCTGRTVHAKGRFFTLYADKAAGRATRMDCRDVFDTAVFFSKACWVGKKEDNPSEEPLPLPESLQS 212
            LR C G ++ K     +G+ L   PG   +     GG LGTL+      PVLY++FP+GRLK  G  V+A+ RF TL   + A R   + C DVFD  V F +  W+G  + NPSE PLP+P  L +
Sbjct:    1 LRACHGQDIKKKSGHRKGKFLFAFPGL--VSPMPEGGTLGTLDKLDTDKPVLYIDFPQGRLKMQGTLVYAQNRFLTL---QCARRGKSVVCDDVFDAVVTFPEVSWIGPVDANPSEAPLPIPSFLHA 122          
BLAST of mRNA_Ecto-sp9_F_contig967.17771.1 vs.
Match: Uncharacterized (protein n=2 Tax=Marchantia polymorpha TaxID=3197 RepID=A0A176W2G0_MARPO)

HSP 1 Score: 99.8 bits (247), Expect = 4.240e-19
Identity = 51/137 (37.23%), Postives = 77/137 (56.20%), Query Frame = 0
Query:   77 PAAIAPSSTLRQCDGLNVVKNKARGRGRQLMVLPGALGLGNGSTGGKLGTLNNATPANPVLYVEFPEGRLKCTGRTVHAKGRFFTLYADKAAGRATRMDCRDVFDTAVFFSKACWVGKKEDNPSEEPLPLPESLQSL 213
            PA + P+ T+R+C+G ++VK K   + + L   PG +      +GGK G L +    NP+LYV+FP GRLK  G  V+ K ++ T++     G      C D F++ V F ++ W+G KE+NP E  LP P  LQ +
Sbjct:   43 PAPLVPTKTIRKCNGKDIVK-KGNRKTKYLFAFPGLVAP---VSGGKFGDLTHLDSRNPILYVDFPHGRLKLFGTIVYPKNKYLTMHFVPGRGDIV---CEDYFESLVVFPESWWIGTKEENPEELRLPFPSDLQQV 172          
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp9_F_contig967.17771.1 vs.
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Ectocarpus species9 EcSCA_722f female vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
Putative1.660e-15191.22type II topoisomerase n=1 Tax=Ectocarpus siliculos... [more]
Uncharacterized1.090e-14883.08protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=... [more]
Uncharacterized1.540e-2037.50protein n=1 Tax=Aegilops tauschii subsp. strangula... [more]
Uncharacterized2.400e-2036.73protein n=1 Tax=Aegilops tauschii subsp. strangula... [more]
Hypothetical3.970e-2039.42protein n=2 Tax=Miscanthus lutarioriparius TaxID=4... [more]
Uncharacterized4.350e-2037.41protein n=1 Tax=Triticum turgidum subsp. durum Tax... [more]
Uncharacterized2.290e-1940.30protein n=1 Tax=Aphanomyces astaci TaxID=112090 Re... [more]
Uncharacterized3.150e-1936.05protein n=1 Tax=Aegilops tauschii subsp. strangula... [more]
Uncharacterized3.990e-1940.94protein (Fragment) n=1 Tax=Aphanomyces astaci TaxI... [more]
Uncharacterized4.240e-1937.23protein n=2 Tax=Marchantia polymorpha TaxID=3197 R... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0 of Ectocarpus species9 EcSCA_722f female
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR038859DNA-binding protein RHL1PANTHERPTHR35698FAMILY NOT NAMEDcoord: 76..334

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp9_F_contig967contigEcto-sp9_F_contig967:18428..21589 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Ectocarpus species9 EcSCA_722f female2022-09-29
Diamond blastp: OGS1.0 of Ectocarpus species9 EcSCA_722f female vs UniRef902022-09-16
OGS1.0 of Ectocarpus species9 EcSCA_722f female2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp9_F_contig967.17771.1mRNA_Ecto-sp9_F_contig967.17771.1Ectocarpus species9 EcSCA_722f femalemRNAEcto-sp9_F_contig967 18428..21669 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp9_F_contig967.17771.1 ID=prot_Ecto-sp9_F_contig967.17771.1|Name=mRNA_Ecto-sp9_F_contig967.17771.1|organism=Ectocarpus species9 EcSCA_722f female|type=polypeptide|length=530bp
MSKKRERDGGGSDTFQHDNGAESLLFEIAPPPEDRTTKRSKKSSTADAPL
LPQESAGSAGDGNNIAASTAEPSKYHPAAIAPSSTLRQCDGLNVVKNKAR
GRGRQLMVLPGALGLGNGSTGGKLGTLNNATPANPVLYVEFPEGRLKCTG
RTVHAKGRFFTLYADKAAGRATRMDCRDVFDTAVFFSKACWVGKKEDNPS
EEPLPLPESLQSLGGEDEQASGSGGDDGDATGGGDAAPKLTAADFKTHFG
GGNPASLMSGDSESKASAGNDAGNGERGGGGSDGEEGEGRSAAAEGGATK
TVGRRTSSRSTKSTKTYVEEDSDDGELEDGSGSSSSSGDEGAGGGRGGAD
DGDEDVVAVEGGSSGSSKNDGGGSGRGSGSGSGAGGVEAFSILNAPATAK
RKPVTVGSGKEKKNAPASSKKKKAGAGDAKGKGRRRALASSGSSSSSDDD
DDKGGSGDENGDSGEESPASGEDVAAAAVRPGPARRSSRSSAVSRVKYTQ
SSSGSEEEDEEEEEEEEEGGDGDDDEFEP*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR038859RHL1