prot_Ecto-sp9_F_contig9617.17733.1 (polypeptide) Ectocarpus species9 EcSCA_722f female

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview


Name	mRNA_Ecto-sp9_F_contig9617.17733.1
Unique Name	prot_Ecto-sp9_F_contig9617.17733.1
Type	polypeptide
Organism	Ectocarpus species9 EcSCA_722f female (Ectocarpus species9 EcSCA_722f female)
Sequence length	510

Homology

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BLAST of mRNA_Ecto-sp9_F_contig9617.17733.1 vs.
Match: Uncharacterized (protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LKB1_ECTSI)

HSP 1 Score: 558 bits (1439), Expect = 3.020e-193
Identity = 434/462 (93.94%), Postives = 436/462 (94.37%), Query Frame = 0

Query:   49 KASMAHMNPKRTGVLLDFGTGTSFASFAELWNYLRHNGWATLPGKGLASWHYFPPGSDPKMRHPVLRRDFFDSEDAVIDHVRRTGLERPAPVGTVIGRSSPGSTSRPGSSRVSDARRSPPPTAPTQAGPGKPASGKRKPSSRSGAAVAPTPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGRQQQGGRGTEPSAVGGKRSHGKTMQVEAALVSPPRGSAPNLTRQVMRQAVTARRLAKSPPAPSPSKRPKRAAPQVAPKELVRLANKQLKTVRGILDGTERPFPGPCGVERPVADVVKFVKKAHNAWLAQLQQRNNVAALQGMIGAGAIVLAGPRGSGKSTAFQAAAAREMRMDAG 510
            +ASMAHMNPKRTGVLLDFGTGTSFASFAELWNYLRHNGWATLPGKGLASWHYFPPGSDPKMRHPVLRRDFFDSEDAVIDHVRRTGLERPAPVGTVIGRSSPGSTSRPGS+RVSDARRSPPPTAPTQA PGKPASGKRKPSSRSGAAVAPT    XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX                  GR QQGGR TEPSAVGGKRSHGKTMQVEAALVSPPRGSAPNLTRQVMRQAVTARRLAKSPPAPSPSKRPKRAAPQVAPKELVRLANKQLKTVRGILDGTERPFPGPCGVERPVADVVKFVKKAHNAWLAQLQQRNNVAALQGMIGAGAIVLAGPRGSGKSTAFQAAAA EMRMDAG
Sbjct:   48 RASMAHMNPKRTGVLLDFGTGTSFASFAELWNYLRHNGWATLPGKGLASWHYFPPGSDPKMRHPVLRRDFFDSEDAVIDHVRRTGLERPAPVGTVIGRSSPGSTSRPGSTRVSDARRSPPPTAPTQADPGKPASGKRKPSSRSGAAVAPT----XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDGEKGEGAVPSGGGEARRGRPQQGGRDTEPSAVGGKRSHGKTMQVEAALVSPPRGSAPNLTRQVMRQAVTARRLAKSPPAPSPSKRPKRAAPQVAPKELVRLANKQLKTVRGILDGTERPFPGPCGVERPVADVVKFVKKAHNAWLAQLQQRNNVAALQGMIGAGAIVLAGPRGSGKSTAFQAAAAGEMRMDAG 505

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BLAST of mRNA_Ecto-sp9_F_contig9617.17733.1 vs.
Match: Uncharacterized (protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JYH6_9PHAE)

HSP 1 Score: 371 bits (952), Expect = 1.310e-120
Identity = 309/377 (81.96%), Postives = 309/377 (81.96%), Query Frame = 0

Query:    1 LGGQLKHQFAPALAAADSMTRQQXXXXXXXXXXXXXXXSCATPGTPVSKASMAHMNPKRTGVLLDFGTGTSFASFAELWNYLRHNGWATLPGKGLASWHYFPPGSDPKMRHPVLRRDFFDSEDAVIDHVRRTGLERPAPVGTVIGRSSPGSTSRPGSSRVSDARRSPPPTAPTQAGPGKPASGKRKPSSRSGAAVAPTPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGRQQQGGRGTEPSAVGGKRSHGKTMQVEAALVSPPRGSAPNLT 377
            LG QLKHQFAPALAAADSMTRQQXXXXXXXXXXX    SCATPGTPVSKASMAHMNPKRTGVLLDFGTGTSFASFAELWNYLRHNGWATLPGKGLASWHYFPPGSDPKMRHPVLRRDFFDSEDAVIDHVRRTGLERPAPVGTVIGRSSPGSTSR GSSRVSDARRSPPPTAPTQAG GKPASGKRKPSSRSGAAVAPTPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX                                                            GRQQQGGRGT PSAVGGKRSHGKTMQVEAALVSPPRGSAPNLT
Sbjct:  102 LGAQLKHQFAPALAAADSMTRQQXXXXXXXXXXX----SCATPGTPVSKASMAHMNPKRTGVLLDFGTGTSFASFAELWNYLRHNGWATLPGKGLASWHYFPPGSDPKMRHPVLRRDFFDSEDAVIDHVRRTGLERPAPVGTVIGRSSPGSTSRSGSSRVSDARRSPPPTAPTQAGRGKPASGKRKPSSRSGAAVAPTPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDGAAEPDNVGGVEEWSGSGNISSDDDSLEVMDKKEGEGEKGEGAVPPGGCAARR------GRQQQGGRGTGPSAVGGKRSHGKTMQVEAALVSPPRGSAPNLT 468

[Close]

BLAST of mRNA_Ecto-sp9_F_contig9617.17733.1 vs.
Match: Uncharacterized (protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JZJ7_9PHAE)

HSP 1 Score: 219 bits (557), Expect = 2.160e-62
Identity = 116/121 (95.87%), Postives = 118/121 (97.52%), Query Frame = 0

Query:  381 MRQAVTARRLAKSPPAPSPSKRPKRAAPQVAPKELVRLANKQLKTVRGILDGTERPFPGPCGVERPVADVVKFVKKAHNAWLAQLQQRNNVAALQGMIGAGAIVLAGPRGSGKSTAFQAAA 501
            MRQAVTARRLAKSPPAPSP+KRPKRAAPQV  KELVRLANKQLKTVRGILDGTERPFPGPCGVERPVADVVKFVKKAHNAWLAQLQQRNNV ALQGMIGAGA+VLAGPRGSGKSTAFQAAA
Sbjct:    1 MRQAVTARRLAKSPPAPSPAKRPKRAAPQVTLKELVRLANKQLKTVRGILDGTERPFPGPCGVERPVADVVKFVKKAHNAWLAQLQQRNNVGALQGMIGAGAMVLAGPRGSGKSTAFQAAA 121

The following BLAST results are available for this feature:

BLAST of mRNA_Ecto-sp9_F_contig9617.17733.1 vs.

BLAST of mRNA_Ecto-sp9_F_contig9617.17733.1 vs.
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Ectocarpus species9 EcSCA_722f female vs UniRef90)
Total hits: 3


Match Name	E-value	Identity	Description
Uncharacterized	3.020e-193	93.94	protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 ...	[more]
Uncharacterized	1.310e-120	81.96	protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=...	[more]
Uncharacterized	2.160e-62	95.87	protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=...	[more]

InterPro

Analysis Name: InterProScan on OGS1.0 of Ectocarpus species9 EcSCA_722f female
Date Performed: 2022-09-29


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 16..36
None	No IPR available	PANTHER	PTHR13270	PROTEIN C20ORF116-RELATED	coord: 22..308

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
Ecto-sp9_F_contig9617	contig	Ecto-sp9_F_contig9617:463..4396 -

Analyses

This polypeptide is derived from or has results from the following analyses


Analysis Name	Date Performed
InterProScan on OGS1.0 of Ectocarpus species9 EcSCA_722f female	2022-09-29
Diamond blastp: OGS1.0 of Ectocarpus species9 EcSCA_722f female vs UniRef90	2022-09-16
OGS1.0 of Ectocarpus species9 EcSCA_722f female	2021-02-24

Relationships

This polypeptide derives from the following mRNA feature(s):


Feature Name	Unique Name	Species	Type	Position
mRNA_Ecto-sp9_F_contig9617.17733.1	mRNA_Ecto-sp9_F_contig9617.17733.1	Ectocarpus species9 EcSCA_722f female	mRNA	Ecto-sp9_F_contig9617 463..4396 -

Sequences

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>prot_Ecto-sp9_F_contig9617.17733.1 ID=prot_Ecto-sp9_F_contig9617.17733.1|Name=mRNA_Ecto-sp9_F_contig9617.17733.1|organism=Ectocarpus species9 EcSCA_722f female|type=polypeptide|length=510bp
LGGQLKHQFAPALAAADSMTRQQQQQQQQQQQQQQQQQSCATPGTPVSKA
SMAHMNPKRTGVLLDFGTGTSFASFAELWNYLRHNGWATLPGKGLASWHY
FPPGSDPKMRHPVLRRDFFDSEDAVIDHVRRTGLERPAPVGTVIGRSSPG
STSRPGSSRVSDARRSPPPTAPTQAGPGKPASGKRKPSSRSGAAVAPTPP
PPSRSPAPQETAAAAAAAAAAVAASAPSPAAPPSKSATDGGGGGGGGGAI
TGSTTTNGTVTAAAARNTGGAADGRHGEGGDGAAEPDDVGGVEEWSGSGN
ISSDDDSLVVMDKKEEEGEKGEGAVPSGGGEARRGRQQQGGRGTEPSAVG
GKRSHGKTMQVEAALVSPPRGSAPNLTRQVMRQAVTARRLAKSPPAPSPS
KRPKRAAPQVAPKELVRLANKQLKTVRGILDGTERPFPGPCGVERPVADV
VKFVKKAHNAWLAQLQQRNNVAALQGMIGAGAIVLAGPRGSGKSTAFQAA
AAREMRMDAG