mRNA_Ecto-sp9_F_contig9617.17733.1 (mRNA) Ectocarpus species9 EcSCA_722f female

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_Ecto-sp9_F_contig9617.17733.1
Unique NamemRNA_Ecto-sp9_F_contig9617.17733.1
TypemRNA
OrganismEctocarpus species9 EcSCA_722f female (Ectocarpus species9 EcSCA_722f female)
Homology
[Close]
BLAST of mRNA_Ecto-sp9_F_contig9617.17733.1 vs.
Match: Uncharacterized (protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LKB1_ECTSI)

HSP 1 Score: 558 bits (1439), Expect = 3.020e-193
Identity = 434/462 (93.94%), Postives = 436/462 (94.37%), Query Frame = 1 
Query:  145 KASMAHMNPKRTGVLLDFGTGTSFASFAELWNYLRHNGWATLPGKGLASWHYFPPGSDPKMRHPVLRRDFFDSEDAVIDHVRRTGLERPAPVGTVIGRSSPGSTSRPGSSRVSDARRSPPPTAPTQAGPGKPASGKRKPSSRSGAAVAPTPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGRQQQGGRGTEPSAVGGKRSHGKTMQVEAALVSPPRGSAPNLTRQVMRQAVTARRLAKSPPAPSPSKRPKRAAPQVAPKELVRLANKQLKTVRGILDGTERPFPGPCGVERPVADVVKFVKKAHNAWLAQLQQRNNVAALQGMIGAGAIVLAGPRGSGKSTAFQAAAAREMRMDAG 1530
            +ASMAHMNPKRTGVLLDFGTGTSFASFAELWNYLRHNGWATLPGKGLASWHYFPPGSDPKMRHPVLRRDFFDSEDAVIDHVRRTGLERPAPVGTVIGRSSPGSTSRPGS+RVSDARRSPPPTAPTQA PGKPASGKRKPSSRSGAAVAPT    XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX                  GR QQGGR TEPSAVGGKRSHGKTMQVEAALVSPPRGSAPNLTRQVMRQAVTARRLAKSPPAPSPSKRPKRAAPQVAPKELVRLANKQLKTVRGILDGTERPFPGPCGVERPVADVVKFVKKAHNAWLAQLQQRNNVAALQGMIGAGAIVLAGPRGSGKSTAFQAAAA EMRMDAG
Sbjct:   48 RASMAHMNPKRTGVLLDFGTGTSFASFAELWNYLRHNGWATLPGKGLASWHYFPPGSDPKMRHPVLRRDFFDSEDAVIDHVRRTGLERPAPVGTVIGRSSPGSTSRPGSTRVSDARRSPPPTAPTQADPGKPASGKRKPSSRSGAAVAPT----XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDGEKGEGAVPSGGGEARRGRPQQGGRDTEPSAVGGKRSHGKTMQVEAALVSPPRGSAPNLTRQVMRQAVTARRLAKSPPAPSPSKRPKRAAPQVAPKELVRLANKQLKTVRGILDGTERPFPGPCGVERPVADVVKFVKKAHNAWLAQLQQRNNVAALQGMIGAGAIVLAGPRGSGKSTAFQAAAAGEMRMDAG 505
[Close]
BLAST of mRNA_Ecto-sp9_F_contig9617.17733.1 vs.
Match: Uncharacterized (protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JYH6_9PHAE)

HSP 1 Score: 371 bits (952), Expect = 1.310e-120
Identity = 309/377 (81.96%), Postives = 309/377 (81.96%), Query Frame = 1 
Query:    1 LGGQLKHQFAPALAAADSMTRQQXXXXXXXXXXXXXXXSCATPGTPVSKASMAHMNPKRTGVLLDFGTGTSFASFAELWNYLRHNGWATLPGKGLASWHYFPPGSDPKMRHPVLRRDFFDSEDAVIDHVRRTGLERPAPVGTVIGRSSPGSTSRPGSSRVSDARRSPPPTAPTQAGPGKPASGKRKPSSRSGAAVAPTPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGRQQQGGRGTEPSAVGGKRSHGKTMQVEAALVSPPRGSAPNLT 1131
            LG QLKHQFAPALAAADSMTRQQXXXXXXXXXXX    SCATPGTPVSKASMAHMNPKRTGVLLDFGTGTSFASFAELWNYLRHNGWATLPGKGLASWHYFPPGSDPKMRHPVLRRDFFDSEDAVIDHVRRTGLERPAPVGTVIGRSSPGSTSR GSSRVSDARRSPPPTAPTQAG GKPASGKRKPSSRSGAAVAPTPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX                                                            GRQQQGGRGT PSAVGGKRSHGKTMQVEAALVSPPRGSAPNLT
Sbjct:  102 LGAQLKHQFAPALAAADSMTRQQXXXXXXXXXXX----SCATPGTPVSKASMAHMNPKRTGVLLDFGTGTSFASFAELWNYLRHNGWATLPGKGLASWHYFPPGSDPKMRHPVLRRDFFDSEDAVIDHVRRTGLERPAPVGTVIGRSSPGSTSRSGSSRVSDARRSPPPTAPTQAGRGKPASGKRKPSSRSGAAVAPTPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDGAAEPDNVGGVEEWSGSGNISSDDDSLEVMDKKEGEGEKGEGAVPPGGCAARR------GRQQQGGRGTGPSAVGGKRSHGKTMQVEAALVSPPRGSAPNLT 468
[Close]
BLAST of mRNA_Ecto-sp9_F_contig9617.17733.1 vs.
Match: Uncharacterized (protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JZJ7_9PHAE)

HSP 1 Score: 219 bits (557), Expect = 2.160e-62
Identity = 116/121 (95.87%), Postives = 118/121 (97.52%), Query Frame = 1 
Query: 1141 MRQAVTARRLAKSPPAPSPSKRPKRAAPQVAPKELVRLANKQLKTVRGILDGTERPFPGPCGVERPVADVVKFVKKAHNAWLAQLQQRNNVAALQGMIGAGAIVLAGPRGSGKSTAFQAAA 1503
            MRQAVTARRLAKSPPAPSP+KRPKRAAPQV  KELVRLANKQLKTVRGILDGTERPFPGPCGVERPVADVVKFVKKAHNAWLAQLQQRNNV ALQGMIGAGA+VLAGPRGSGKSTAFQAAA
Sbjct:    1 MRQAVTARRLAKSPPAPSPAKRPKRAAPQVTLKELVRLANKQLKTVRGILDGTERPFPGPCGVERPVADVVKFVKKAHNAWLAQLQQRNNVGALQGMIGAGAMVLAGPRGSGKSTAFQAAA 121
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp9_F_contig9617.17733.1 vs.
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Ectocarpus species9 EcSCA_722f female vs UniRef90)
Total hits: 3
Match NameE-valueIdentityDescription
Uncharacterized3.020e-19393.94protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 ... [more]
Uncharacterized1.310e-12081.96protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=... [more]
Uncharacterized2.160e-6295.87protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=... [more]
back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp9_F_contig9617contigEcto-sp9_F_contig9617:463..4396 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 of Ectocarpus species9 EcSCA_722f female vs UniRef902022-09-19
OGS1.0 of Ectocarpus species9 EcSCA_722f female2021-02-24
Properties
Property NameValue
Hectar predicted targeting categoryother localisation
Ec32 ortholog descriptionDomain of unknown function DUF11
Ec32 orthologEc-01_009600.1
Exons6
Model size1530
Cds size1530
Stop0
Start0
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp9_F_contig9617.17733.1prot_Ecto-sp9_F_contig9617.17733.1Ectocarpus species9 EcSCA_722f femalepolypeptideEcto-sp9_F_contig9617 463..4396 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622931048.8039455-CDS-Ecto-sp9_F_contig9617:462..4891622931048.8039455-CDS-Ecto-sp9_F_contig9617:462..489Ectocarpus species9 EcSCA_722f femaleCDSEcto-sp9_F_contig9617 463..489 -
1692279008.6710434-CDS-Ecto-sp9_F_contig9617:462..4891692279008.6710434-CDS-Ecto-sp9_F_contig9617:462..489Ectocarpus species9 EcSCA_722f femaleCDSEcto-sp9_F_contig9617 463..489 -
1622931048.8168306-CDS-Ecto-sp9_F_contig9617:625..7361622931048.8168306-CDS-Ecto-sp9_F_contig9617:625..736Ectocarpus species9 EcSCA_722f femaleCDSEcto-sp9_F_contig9617 626..736 -
1692279008.6819148-CDS-Ecto-sp9_F_contig9617:625..7361692279008.6819148-CDS-Ecto-sp9_F_contig9617:625..736Ectocarpus species9 EcSCA_722f femaleCDSEcto-sp9_F_contig9617 626..736 -
1622931048.8330986-CDS-Ecto-sp9_F_contig9617:1212..14741622931048.8330986-CDS-Ecto-sp9_F_contig9617:1212..1474Ectocarpus species9 EcSCA_722f femaleCDSEcto-sp9_F_contig9617 1213..1474 -
1692279008.6914823-CDS-Ecto-sp9_F_contig9617:1212..14741692279008.6914823-CDS-Ecto-sp9_F_contig9617:1212..1474Ectocarpus species9 EcSCA_722f femaleCDSEcto-sp9_F_contig9617 1213..1474 -
1622931048.851817-CDS-Ecto-sp9_F_contig9617:1790..24911622931048.851817-CDS-Ecto-sp9_F_contig9617:1790..2491Ectocarpus species9 EcSCA_722f femaleCDSEcto-sp9_F_contig9617 1791..2491 -
1692279008.7031343-CDS-Ecto-sp9_F_contig9617:1790..24911692279008.7031343-CDS-Ecto-sp9_F_contig9617:1790..2491Ectocarpus species9 EcSCA_722f femaleCDSEcto-sp9_F_contig9617 1791..2491 -
1622931048.864901-CDS-Ecto-sp9_F_contig9617:3205..33551622931048.864901-CDS-Ecto-sp9_F_contig9617:3205..3355Ectocarpus species9 EcSCA_722f femaleCDSEcto-sp9_F_contig9617 3206..3355 -
1692279008.7136602-CDS-Ecto-sp9_F_contig9617:3205..33551692279008.7136602-CDS-Ecto-sp9_F_contig9617:3205..3355Ectocarpus species9 EcSCA_722f femaleCDSEcto-sp9_F_contig9617 3206..3355 -
1622931048.879745-CDS-Ecto-sp9_F_contig9617:4117..43961622931048.879745-CDS-Ecto-sp9_F_contig9617:4117..4396Ectocarpus species9 EcSCA_722f femaleCDSEcto-sp9_F_contig9617 4118..4396 -
1692279008.7227478-CDS-Ecto-sp9_F_contig9617:4117..43961692279008.7227478-CDS-Ecto-sp9_F_contig9617:4117..4396Ectocarpus species9 EcSCA_722f femaleCDSEcto-sp9_F_contig9617 4118..4396 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_Ecto-sp9_F_contig9617.17733.1

>prot_Ecto-sp9_F_contig9617.17733.1 ID=prot_Ecto-sp9_F_contig9617.17733.1|Name=mRNA_Ecto-sp9_F_contig9617.17733.1|organism=Ectocarpus species9 EcSCA_722f female|type=polypeptide|length=510bp
LGGQLKHQFAPALAAADSMTRQQQQQQQQQQQQQQQQQSCATPGTPVSKA
SMAHMNPKRTGVLLDFGTGTSFASFAELWNYLRHNGWATLPGKGLASWHY
FPPGSDPKMRHPVLRRDFFDSEDAVIDHVRRTGLERPAPVGTVIGRSSPG
STSRPGSSRVSDARRSPPPTAPTQAGPGKPASGKRKPSSRSGAAVAPTPP
PPSRSPAPQETAAAAAAAAAAVAASAPSPAAPPSKSATDGGGGGGGGGAI
TGSTTTNGTVTAAAARNTGGAADGRHGEGGDGAAEPDDVGGVEEWSGSGN
ISSDDDSLVVMDKKEEEGEKGEGAVPSGGGEARRGRQQQGGRGTEPSAVG
GKRSHGKTMQVEAALVSPPRGSAPNLTRQVMRQAVTARRLAKSPPAPSPS
KRPKRAAPQVAPKELVRLANKQLKTVRGILDGTERPFPGPCGVERPVADV
VKFVKKAHNAWLAQLQQRNNVAALQGMIGAGAIVLAGPRGSGKSTAFQAA
AAREMRMDAG
back to top

mRNA from alignment at Ecto-sp9_F_contig9617:463..4396-

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_Ecto-sp9_F_contig9617.17733.1 ID=mRNA_Ecto-sp9_F_contig9617.17733.1|Name=mRNA_Ecto-sp9_F_contig9617.17733.1|organism=Ectocarpus species9 EcSCA_722f female|type=mRNA|length=3934bp|location=Sequence derived from alignment at Ecto-sp9_F_contig9617:463..4396- (Ectocarpus species9 EcSCA_722f female)
TTGGGGGGCCAGCTCAAGCACCAGTTCGCGCCCGCTCTCGCCGCGGCCGA
CTCCATGACGAGGCAGCAGCAGCAGCAGCAGCAGCAACAGCAGCAGCAGC
AGCAGCAGCAGCAGTCGTGTGCCACCCCGGGTACCCCGGTGAGCAAGGCC
AGCATGGCGCACATGAATCCCAAGCGGACGGGTGTGCTGCTGGACTTCGG
CACCGGCACCTCCTTCGCGAGCTTTGCGGAGCTGTGGAACTACCTCCGGC
ACAACGGCTGGGCCACCCTCCCCGGCAAGGTACGCATAGATACGTGCGTG
TATACAGTTAGGCCCACACTTAAGAAGCTCTACTATGTTATACTTTTGAC
CGAAGCTGGAGTTCTTTGTTCCTAGGGCCATGCTACGAATGGCCGCTAGT
CATATAAGTTTTAGTGTAGTGGTTCTTAACCGAGCTCGCAAATGGTGCTC
AAGTTCTTAGAGTTTTTTTAGGCTCAATTTCGTAACTCCTGGGGTGTGGT
GGCGCGTTCTGTATGTGTGAGGGAAGTTTGCAGGTTGTTGTACTCCGGAT
GCATTGCGTGAATTCAGGGTTTGTTCCCTCGGACGGTGGAGCTTCAGTTT
TCAGGGCTTCCTCCTTCCATTTGTTCGATGCTTGGAAGCTTTACTTTCTT
GCACGTATGAAGGGCTGCCTGGTGGTTGCTTGCGTACGTCCATGTTGTTT
TGTAAAAGTACGTTTTTTGTGCGGCCCTATCCGATAAATTTTCCTGGTCT
TCTTCCCCCGAGGCACCTGGTTGCTCTTTATCTTGTGGCCAGATATTTCC
AGTCACAACGAAAGGTAGCGCCAGCGTTGATTCGAATCGTGTACAAGTCT
CCCAGGGAAAATAGCGCCTCACATGTACCTCTTCCTCGCCTTTGACTTTT
TCCCTCTGCACCTGTCGTTTGGCCCTATCATGTCTGCGTGGTTGCGTCTT
TCTCTTTTCGTTTCTCTCTCCCTATCTGTCTATCTGCCTGTCTGTCTGTC
TGTCTCTCCCTCTCCCCCTCTCGCTCTCTCTGAAACGGTAGGGCCTAGCC
TCGTGGCACTACTTCCCCCCCGGCTCCGACCCCAAGATGCGCCACCCCGT
CCTTCGGCGTGACTTCTTCGACTCGGAGGACGCCGTGATCGACCACGTCC
GCCGGACCGGCCTGGAGAGGCCTGCCCCCGTCGGGACGGTGGTGCGTTGC
AGATATGTATCTTTTTTTGTACCTTATTTTTGGTTGTACTGCTGTACTGC
TGTTTGGTCGTTTGGTGTTAGGCGTGTCCATGAACTTTTGCTCTCTGGTA
TGGGTTTCTCTTTCCTTGGATGGGACGGAACATTGAGTTTTGTCAATCTC
GTTCCACGGAACGGTGGTGCGTTGCAGATACCGCCGCGTGTGCCATTGTA
CCTTGTTTTGGTTGTACCTGCTGTCTGGTCGTTTCGTGTATCGCTCGCTG
GTGCGTTGCTGAGGGCGTGTGCACTTTCGACGATAGTGGTTATTTTGCCT
TGTTTTTGTTGTACTGCAGGTCTGGTCGTTTCGTGTATCGCTTCGCGTCG
TGAATGTTTGCTGTGGTCTGGTTTGCTCTTCCCTGGGGTGGGACATTTTT
TTTTTCAGTCGTATTTCACCGGCCGATGCCGTTTTTCACCGATCGCTGGC
TGTCGTAGCGTGCGCACTCTTCCCCTATTTAGCCGTATGTATCAGTTATG
CAACGTTTAGGACAAGTGGCGGACGATGCTCCGTGTGCTGTTCTGCCCCG
CCGTGCTGGCCATAGTTCCCATGCACCGCAGCATAAACTGCCTTGTGACG
TCCACCCTTGTGGCGTCTAAATCACCCATCCACTCAACCACGCGCTCCGC
TTGCTCCCACGCCCCCCCCCCTCCCCCGACGTTTTCCCCCTCAATTGGCC
TCAAGATCGGGAGATCCAGCCCTGGTTCGACCTCACGCCCCGGCAGCAGC
AGAGTATCCGATGCCCGGCGGTCGCCACCGCCAACGGCGCCCACGCAGGC
CGGCCCTGGGAAGCCTGCCAGCGGTAAGAGAAAGCCCTCTTCGCGCAGCG
GCGCAGCGGTGGCACCAACGCCCCCGCCTCCCTCGCGCTCTCCTGCGCCT
CAAGAAACCGCCGCCGCCGCCGCCGCCGCCGCCGCCGCCGTTGCTGCCTC
CGCTCCGTCCCCTGCTGCGCCGCCCTCCAAGAGTGCGACTGATGGCGGCG
GTGGCGGCGGCGGCGGCGGCGCGATCACCGGAAGCACTACCACCAACGGC
ACCGTGACGGCAGCGGCGGCGAGGAATACAGGGGGCGCCGCTGATGGGAG
GCACGGGGAGGGAGGTGACGGTGCGGCAGAACCCGATGATGTTGGCGGTG
TCGAGGAGTGGAGCGGGAGCGGCAACATTAGCTCTGATGATGACTCCCTG
GTGGTAATGGATAAGAAAGAAGAGGAGGGGGAGAAGGGGGAGGGTGCCGT
CCCGTCCGGCGGCGGCGAGGCCCGACGGGGACGACAGCAGCAGGGCGGCA
GGGGTACGGAGCCGAGCGCTGTCGGGGGCAAGCGCAGCCACGGGAAGACG
ATGCAAGTCGAGGCCGCGCTGGTCTCGCCTCCGCGCGGGTCGGCGCCGAA
CCTGACGTGAGTGACAGGGAGAGTGGGGGAGATAGAGAGAGACGGAGACA
GGCAGACAGACAGACAGAGAGAGAGAGGCAAAGAGAGAGAGAGACGGAGA
GAGAGAGATGCAGTACGTCGGGATACAAAGGAATTTGGGCCCGAGCCAGA
AACGGTAGACAACAGTAGTCGCAAGGCCATATGCGATCACGTCGCCGTGC
TATTCCGGCGACCGACCGTTCTACCACGCCCCGAAAAAAGCTGCCCACAG
CAGTGCGGAGAAACACCGCTCGTCCTCTCATCCTTGTTCTCCCGACCCGC
CTGCCGTCCGTCCGTCCCCCAGGCGGCAGGTGATGCGGCAGGCCGTCACG
GCGCGCAGGCTCGCCAAGAGCCCGCCGGCCCCCTCGCCCTCCAAGAGGCC
CAAGCGGGCGGCGCCGCAGGTCGCCCCGAAGGAGCTGGTGCGGCTGGCGA
ACAAGCAGCTCAAGACCGTTCGCGGCATTCTGGACGGCACGGAGCGCCCG
TTCCCGGGGCCCTGCGGAGTGGAGAGGCCGGTCGCCGACGTGGTGAAGTT
CGTCAAGAAGGCGCACAACGCGTGGTTGGCGCAGGTGTGCTACATGGACG
GGAGGGAGGGTGGCACAGCTGATGATGTGATGGGGGCGGCGGAGATGCAG
AGGTTATTTTCTTTGGGGGGGGGGGGGGGGGGGGGTGGGGGGGGGGGGGG
GGGGGGTGGGGGAAGGGGGGAGGGGTGTGGGTTGCCGGACCCCCCGCCTG
CGACCCCCCCCNNNNNNNNNNGGGAGGTAGTGGGGGGGGGGGGGGGGGCG
GGGCGGTGGGGGTGTTGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGC
TGTTGTGTGAAGAGAGTAGTGTTGAGCAACAGCGCAGCAGTCTGGTCTTC
ACGAACCCTCGCCTGATACCGTCCACGCTAACTTAATGCTATCCTTAATC
GTCGTGTGAATGTTTTTGTGTCCGGTCTAATCCATCCCAGCCCATGTTTT
CCGCTGTACCGTGCCGTATTTGACGTCCCAATAAAAACGACTGCTGTGCC
ACAATGACAGCTCCAGCAGCGCAACAACGTTGCCGCGTTGCAAGGGATGA
TCGGAGCCGGAGCTATAGTCTTGGCGGGACCCAGGGGGTCGGGAAAGTCG
ACAGCCTTCCAAGCCGCAGCGGTGAGATTGAGAGGTTGGGATCGGGTGTT
GCCGTCACTGGCTCATGAGGTTTCGTGGGGGGGGGGGGGGGGGGAGGCGC
TCCTCTGCGCTCTGCCAGTTTTTTTTTCATGAAACCGTACGTGATTCAAC
AAAATAGGCCAGGGAGATGCGGATGGACGCAGGC
back to top

Coding sequence (CDS) from alignment at Ecto-sp9_F_contig9617:463..4396-

>mRNA_Ecto-sp9_F_contig9617.17733.1 ID=mRNA_Ecto-sp9_F_contig9617.17733.1|Name=mRNA_Ecto-sp9_F_contig9617.17733.1|organism=Ectocarpus species9 EcSCA_722f female|type=CDS|length=3060bp|location=Sequence derived from alignment at Ecto-sp9_F_contig9617:463..4396- (Ectocarpus species9 EcSCA_722f female)
TTGGGGGGCCAGCTCAAGCACCAGTTCGCGCCCGCTCTCGCCGCGGCCGA
CTCCATGACGAGGCAGCAGCAGCAGCAGCAGCAGCAACAGCAGCAGCAGC
AGCAGCAGCAGCAGTCGTGTGCCACCCCGGGTACCCCGGTGAGCAAGGCC
AGCATGGCGCACATGAATCCCAAGCGGACGGGTGTGCTGCTGGACTTCGG
CACCGGCACCTCCTTCGCGAGCTTTGCGGAGCTGTGGAACTACCTCCGGC
ACAACGGCTGGGCCACCCTCCCCGGCAAGTTGGGGGGCCAGCTCAAGCAC
CAGTTCGCGCCCGCTCTCGCCGCGGCCGACTCCATGACGAGGCAGCAGCA
GCAGCAGCAGCAGCAACAGCAGCAGCAGCAGCAGCAGCAGCAGTCGTGTG
CCACCCCGGGTACCCCGGTGAGCAAGGCCAGCATGGCGCACATGAATCCC
AAGCGGACGGGTGTGCTGCTGGACTTCGGCACCGGCACCTCCTTCGCGAG
CTTTGCGGAGCTGTGGAACTACCTCCGGCACAACGGCTGGGCCACCCTCC
CCGGCAAGGGCCTAGCCTCGTGGCACTACTTCCCCCCCGGCTCCGACCCC
AAGATGCGCCACCCCGTCCTTCGGCGTGACTTCTTCGACTCGGAGGACGC
CGTGATCGACCACGTCCGCCGGACCGGCCTGGAGAGGCCTGCCCCCGTCG
GGACGGTGGGCCTAGCCTCGTGGCACTACTTCCCCCCCGGCTCCGACCCC
AAGATGCGCCACCCCGTCCTTCGGCGTGACTTCTTCGACTCGGAGGACGC
CGTGATCGACCACGTCCGCCGGACCGGCCTGGAGAGGCCTGCCCCCGTCG
GGACGGTGATCGGGAGATCCAGCCCTGGTTCGACCTCACGCCCCGGCAGC
AGCAGAGTATCCGATGCCCGGCGGTCGCCACCGCCAACGGCGCCCACGCA
GGCCGGCCCTGGGAAGCCTGCCAGCGGTAAGAGAAAGCCCTCTTCGCGCA
GCGGCGCAGCGGTGGCACCAACGCCCCCGCCTCCCTCGCGCTCTCCTGCG
CCTCAAGAAACCGCCGCCGCCGCCGCCGCCGCCGCCGCCGCCGTTGCTGC
CTCCGCTCCGTCCCCTGCTGCGCCGCCCTCCAAGAGTGCGACTGATGGCG
GCGGTGGCGGCGGCGGCGGCGGCGCGATCACCGGAAGCACTACCACCAAC
GGCACCGTGACGGCAGCGGCGGCGAGGAATACAGGGGGCGCCGCTGATGG
GAGGCACGGGGAGGGAGGTGACGGTGCGGCAGAACCCGATGATGTTGGCG
GTGTCGAGGAGTGGAGCGGGAGCGGCAACATTAGCTCTGATGATGACTCC
CTGGTGGTAATGGATAAGAAAGAAGAGGAGGGGGAGAAGGGGGAGGGTGC
CGTCCCGTCCGGCGGCGGCGAGGCCCGACGGGGACGACAGCAGCAGGGCG
GCAGGGGTACGGAGCCGAGCGCTGTCGGGGGCAAGCGCAGCCACGGGAAG
ACGATGCAAGTCGAGGCCGCGCTGGTCTCGCCTCCGCGCGGGTCGGCGCC
GAACCTGACATCGGGAGATCCAGCCCTGGTTCGACCTCACGCCCCGGCAG
CAGCAGAGTATCCGATGCCCGGCGGTCGCCACCGCCAACGGCGCCCACGC
AGGCCGGCCCTGGGAAGCCTGCCAGCGGTAAGAGAAAGCCCTCTTCGCGC
AGCGGCGCAGCGGTGGCACCAACGCCCCCGCCTCCCTCGCGCTCTCCTGC
GCCTCAAGAAACCGCCGCCGCCGCCGCCGCCGCCGCCGCCGCCGTTGCTG
CCTCCGCTCCGTCCCCTGCTGCGCCGCCCTCCAAGAGTGCGACTGATGGC
GGCGGTGGCGGCGGCGGCGGCGGCGCGATCACCGGAAGCACTACCACCAA
CGGCACCGTGACGGCAGCGGCGGCGAGGAATACAGGGGGCGCCGCTGATG
GGAGGCACGGGGAGGGAGGTGACGGTGCGGCAGAACCCGATGATGTTGGC
GGTGTCGAGGAGTGGAGCGGGAGCGGCAACATTAGCTCTGATGATGACTC
CCTGGTGGTAATGGATAAGAAAGAAGAGGAGGGGGAGAAGGGGGAGGGTG
CCGTCCCGTCCGGCGGCGGCGAGGCCCGACGGGGACGACAGCAGCAGGGC
GGCAGGGGTACGGAGCCGAGCGCTGTCGGGGGCAAGCGCAGCCACGGGAA
GACGATGCAAGTCGAGGCCGCGCTGGTCTCGCCTCCGCGCGGGTCGGCGC
CGAACCTGACGCGGCAGGTGATGCGGCAGGCCGTCACGGCGCGCAGGCTC
GCCAAGAGCCCGCCGGCCCCCTCGCCCTCCAAGAGGCCCAAGCGGGCGGC
GCCGCAGGTCGCCCCGAAGGAGCTGGTGCGGCTGGCGAACAAGCAGCTCA
AGACCGTTCGCGGCATTCTGGACGGCACGGAGCGCCCGTTCCCGGGGCCC
TGCGGAGTGGAGAGGCCGGTCGCCGACGTGGTGAAGTTCGTCAAGAAGGC
GCACAACGCGTGGTTGGCGCAGGCGGCAGGTGATGCGGCAGGCCGTCACG
GCGCGCAGGCTCGCCAAGAGCCCGCCGGCCCCCTCGCCCTCCAAGAGGCC
CAAGCGGGCGGCGCCGCAGGTCGCCCCGAAGGAGCTGGTGCGGCTGGCGA
ACAAGCAGCTCAAGACCGTTCGCGGCATTCTGGACGGCACGGAGCGCCCG
TTCCCGGGGCCCTGCGGAGTGGAGAGGCCGGTCGCCGACGTGGTGAAGTT
CGTCAAGAAGGCGCACAACGCGTGGTTGGCGCAGCTCCAGCAGCGCAACA
ACGTTGCCGCGTTGCAAGGGATGATCGGAGCCGGAGCTATAGTCTTGGCG
GGACCCAGGGGGTCGGGAAAGTCGACAGCCTTCCAAGCCGCAGCGCTCCA
GCAGCGCAACAACGTTGCCGCGTTGCAAGGGATGATCGGAGCCGGAGCTA
TAGTCTTGGCGGGACCCAGGGGGTCGGGAAAGTCGACAGCCTTCCAAGCC
GCAGCGGCCAGGGAGATGCGGATGGACGCAGGCGCCAGGGAGATGCGGAT
GGACGCAGGC
back to top