prot_Ecto-sp9_F_contig960.17718.1 (polypeptide) Ectocarpus species9 EcSCA_722f female

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp9_F_contig960.17718.1
Unique Nameprot_Ecto-sp9_F_contig960.17718.1
Typepolypeptide
OrganismEctocarpus species9 EcSCA_722f female (Ectocarpus species9 EcSCA_722f female)
Sequence length287
Homology
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BLAST of mRNA_Ecto-sp9_F_contig960.17718.1 vs.
Match: Uncharacterized (protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K5Q9_9PHAE)

HSP 1 Score: 287 bits (735), Expect = 9.380e-90
Identity = 195/252 (77.38%), Postives = 200/252 (79.37%), Query Frame = 0 
Query:   39 MKPASGGQASLGGGASSRPSPTSSLASKGAPEASTYGNGRSSXXXXXXGGLSLPGRRPAATTAHPMPRPSPLAGRTAASASGGMRRFNTAKAPRASXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX-----RTASPDTSERSLATRTISQQSSTGCGAGSTSSRQDDGNNQAPPDAELPQERPACWVPAPAALNEALSATGGSPATRPPGTSTYRRPSRGDAGGGPGTTGDRSGAERSGVRRVAGEEE 285
            M+PA GGQAS GGGASSRPSP +SL SKGAPEASTYGNGRSS XXXX GGLSLPGRRP ATTAHPMPRPSPLAGR AASASGGMRRFNTA+ PRA+    XXXXXX   XXXXXXX                   RTASPDTSERSLA R ISQQSSTGC AGSTSSR+DD        AEL QERPACWVP  AALNEALSATGGSPATRPPGTSTYRRP RGDAGGGPGTTGDR GA RSGVRRVAGEEE
Sbjct:    1 MQPAGGGQASRGGGASSRPSPNASLTSKGAPEASTYGNGRSSGXXXXSGGLSLPGRRPVATTAHPMPRPSPLAGRIAASASGGMRRFNTAQTPRAAPAAAXXXXXXTVTXXXXXXXAVDVRAVAAGVAATAVGAYRTASPDTSERSLAMRRISQQSSTGCCAGSTSSRRDD--------AELSQERPACWVPGAAALNEALSATGGSPATRPPGTSTYRRPPRGDAGGGPGTTGDRPGAGRSGVRRVAGEEE 244
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp9_F_contig960.17718.1 vs.
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Ectocarpus species9 EcSCA_722f female vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
Uncharacterized9.380e-9077.38protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp9_F_contig960contigEcto-sp9_F_contig960:19281..22224 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Ectocarpus species9 EcSCA_722f female2022-09-29
Diamond blastp: OGS1.0 of Ectocarpus species9 EcSCA_722f female vs UniRef902022-09-16
OGS1.0 of Ectocarpus species9 EcSCA_722f female2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp9_F_contig960.17718.1mRNA_Ecto-sp9_F_contig960.17718.1Ectocarpus species9 EcSCA_722f femalemRNAEcto-sp9_F_contig960 19281..22224 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp9_F_contig960.17718.1 ID=prot_Ecto-sp9_F_contig960.17718.1|Name=mRNA_Ecto-sp9_F_contig960.17718.1|organism=Ectocarpus species9 EcSCA_722f female|type=polypeptide|length=287bp
SRESRPLHTGAHVLDHPVHASNSPLPPNNLQQRYATRAMKPASGGQASLG
GGASSRPSPTSSLASKGAPEASTYGNGRSSGGGGGSGGLSLPGRRPAATT
AHPMPRPSPLAGRTAASASGGMRRFNTAKAPRASAPAAAAVTAAAIAAAA
VDVRAVATGFAATAVGANRTASPDTSERSLATRTISQQSSTGCGAGSTSS
RQDDGNNQAPPDAELPQERPACWVPAPAALNEALSATGGSPATRPPGTST
YRRPSRGDAGGGPGTTGDRSGAERSGVRRVAGEEEEG
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