prot_Ecto-sp9_F_contig9593.17710.1 (polypeptide) Ectocarpus species9 EcSCA_722f female

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp9_F_contig9593.17710.1
Unique Nameprot_Ecto-sp9_F_contig9593.17710.1
Typepolypeptide
OrganismEctocarpus species9 EcSCA_722f female (Ectocarpus species9 EcSCA_722f female)
Sequence length119
Homology
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BLAST of mRNA_Ecto-sp9_F_contig9593.17710.1 vs.
Match: Chromosome (20 open reading frame 3 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FPD7_ECTSI)

HSP 1 Score: 230 bits (586), Expect = 1.410e-75
Identity = 116/117 (99.15%), Postives = 116/117 (99.15%), Query Frame = 0 
Query:    1 MRFRVLEVDLAHVLQGQASSENSRREENTPAASLVDALGSCGEEEALPDGVRVFAEALPGFVDNLVFDETRGGYVAGAGTKVTAPFSALHLALKKPAIFRTIIGKLVPMGVIENLVP 117
            MRFRVLEVDLAHVLQGQASSENSRREENTPAASLVDALGSCGEEEALPDGVRVFAEALPGFVDNLVFDETRGGYVAGAGTKV APFSALHLALKKPAIFRTIIGKLVPMGVIENLVP
Sbjct:    1 MRFRVLEVDLAHVLQGQASSENSRREENTPAASLVDALGSCGEEEALPDGVRVFAEALPGFVDNLVFDETRGGYVAGAGTKVAAPFSALHLALKKPAIFRTIIGKLVPMGVIENLVP 117
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BLAST of mRNA_Ecto-sp9_F_contig9593.17710.1 vs.
Match: Str_synth (domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KHN1_9PHAE)

HSP 1 Score: 226 bits (575), Expect = 3.580e-70
Identity = 114/117 (97.44%), Postives = 114/117 (97.44%), Query Frame = 0 
Query:    1 MRFRVLEVDLAHVLQGQASSENSRREENTPAASLVDALGSCGEEEALPDGVRVFAEALPGFVDNLVFDETRGGYVAGAGTKVTAPFSALHLALKKPAIFRTIIGKLVPMGVIENLVP 117
            MRFRVLEVDLAHVLQGQASSENS REE TPAASLVDALGSCGEEEALPDGVRVFAEALPGFVDNLVFDETRGGYVAGAGTKV APFSALHLALKKPAIFRTIIGKLVPMGVIENLVP
Sbjct:  291 MRFRVLEVDLAHVLQGQASSENSHREEKTPAASLVDALGSCGEEEALPDGVRVFAEALPGFVDNLVFDETRGGYVAGAGTKVAAPFSALHLALKKPAIFRTIIGKLVPMGVIENLVP 407
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BLAST of mRNA_Ecto-sp9_F_contig9593.17710.1 vs.
Match: Hypothetical (protein (Fragment) n=2 Tax=Spumella elongata TaxID=89044 RepID=A0A7S3HRQ2_9STRA)

HSP 1 Score: 62.4 bits (150), Expect = 6.380e-9
Identity = 46/122 (37.70%), Postives = 64/122 (52.46%), Query Frame = 0 
Query:    2 RFRVLEVDLAHVLQGQASSENSRREENTPAASLVDALGSCGEEEALPDGVRVFAEALPGFVDNLVFD-----ETRGGYVAGAGTKVTAPFSALHLALKKPAIFRTIIGKLVPMGVIENLVPR 118
            RFRVL+V+   VL   AS   S  E+     +L     +  E  A+  GV  F   +PG VDN+  D     + +  Y+ G G+K TAPFS L   L+   + R II ++VPM ++E LVPR
Sbjct:  318 RFRVLKVNTHKVLSNVASLTASCEEDGGLYQALAMNAHTESENYAIT-GVTTFIPNIPGLVDNVRRDTKLSKDGKEYYLFGLGSKSTAPFSLLWTVLQSN-LLREIIERVVPMKLVEKLVPR 437
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp9_F_contig9593.17710.1 vs.
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Ectocarpus species9 EcSCA_722f female vs UniRef90)
Total hits: 3
Match NameE-valueIdentityDescription
Chromosome1.410e-7599.1520 open reading frame 3 n=1 Tax=Ectocarpus silicul... [more]
Str_synth3.580e-7097.44domain-containing protein n=1 Tax=Ectocarpus sp. C... [more]
Hypothetical6.380e-937.70protein (Fragment) n=2 Tax=Spumella elongata TaxID... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp9_F_contig9593contigEcto-sp9_F_contig9593:1440..5050 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Ectocarpus species9 EcSCA_722f female2022-09-29
Diamond blastp: OGS1.0 of Ectocarpus species9 EcSCA_722f female vs UniRef902022-09-16
OGS1.0 of Ectocarpus species9 EcSCA_722f female2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp9_F_contig9593.17710.1mRNA_Ecto-sp9_F_contig9593.17710.1Ectocarpus species9 EcSCA_722f femalemRNAEcto-sp9_F_contig9593 1440..5050 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp9_F_contig9593.17710.1 ID=prot_Ecto-sp9_F_contig9593.17710.1|Name=mRNA_Ecto-sp9_F_contig9593.17710.1|organism=Ectocarpus species9 EcSCA_722f female|type=polypeptide|length=119bp
MRFRVLEVDLAHVLQGQASSENSRREENTPAASLVDALGSCGEEEALPDG
VRVFAEALPGFVDNLVFDETRGGYVAGAGTKVTAPFSALHLALKKPAIFR
TIIGKLVPMGVIENLVPR*
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