prot_Ecto-sp9_F_contig959.17705.1 (polypeptide) Ectocarpus species9 EcSCA_722f female

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp9_F_contig959.17705.1
Unique Nameprot_Ecto-sp9_F_contig959.17705.1
Typepolypeptide
OrganismEctocarpus species9 EcSCA_722f female (Ectocarpus species9 EcSCA_722f female)
Sequence length79
Homology
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BLAST of mRNA_Ecto-sp9_F_contig959.17705.1 vs.
Match: Uncharacterized (protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LDX2_ECTSI)

HSP 1 Score: 77.4 bits (189), Expect = 1.020e-15
Identity = 42/72 (58.33%), Postives = 47/72 (65.28%), Query Frame = 0 
Query:    5 TLTLELSALVEKGSGDHWEVAILNSNT-HTWDKIGDLSEVGSKWTTSTLTVMGDGDYMDKDNNNQVPVRIRT 75
            TLTLELSALV+KGSGDHW+V + N+     WDKIGDLSE GS W+TS L VM D      D     P RI T
Sbjct:   90 TLTLELSALVKKGSGDHWQVDMFNTRRGKRWDKIGDLSEAGSDWSTSNLVVMSD------DGCGDAPKRINT 155
[Close]
BLAST of mRNA_Ecto-sp9_F_contig959.17705.1 vs.
Match: Uncharacterized (protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LDX1_ECTSI)

HSP 1 Score: 67.4 bits (163), Expect = 3.850e-12
Identity = 40/71 (56.34%), Postives = 44/71 (61.97%), Query Frame = 0 
Query:    6 LTLELSALVEKGSGDHWEVAILNSNT-HTWDKIGDLSEVGSKWTTSTLTVMGDGDYMDKDNNNQVPVRIRT 75
            LTLELSALV KGSGD W+V + NS     WDKIGDLS+ GS WTTS L V+  GD          P RI T
Sbjct:   56 LTLELSALVMKGSGDRWQVDMFNSRRGKKWDKIGDLSKAGSDWTTSNL-VVASGDRC-----GDAPKRINT 120
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp9_F_contig959.17705.1 vs.
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Ectocarpus species9 EcSCA_722f female vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
Uncharacterized1.020e-1558.33protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 ... [more]
Uncharacterized3.850e-1256.34protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 ... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0 of Ectocarpus species9 EcSCA_722f female
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePFAMPF14741GH114_assoccoord: 4..75
e-value: 7.1E-18
score: 65.0

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp9_F_contig959contigEcto-sp9_F_contig959:19945..20181 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Ectocarpus species9 EcSCA_722f female2022-09-29
Diamond blastp: OGS1.0 of Ectocarpus species9 EcSCA_722f female vs UniRef902022-09-16
OGS1.0 of Ectocarpus species9 EcSCA_722f female2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp9_F_contig959.17705.1mRNA_Ecto-sp9_F_contig959.17705.1Ectocarpus species9 EcSCA_722f femalemRNAEcto-sp9_F_contig959 19923..20181 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp9_F_contig959.17705.1 ID=prot_Ecto-sp9_F_contig959.17705.1|Name=mRNA_Ecto-sp9_F_contig959.17705.1|organism=Ectocarpus species9 EcSCA_722f female|type=polypeptide|length=79bp
MFRQTLTLELSALVEKGSGDHWEVAILNSNTHTWDKIGDLSEVGSKWTTS
TLTVMGDGDYMDKDNNNQVPVRIRTFQLD
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