prot_Ecto-sp9_F_contig958.17702.1 (polypeptide) Ectocarpus species9 EcSCA_722f female

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp9_F_contig958.17702.1
Unique Nameprot_Ecto-sp9_F_contig958.17702.1
Typepolypeptide
OrganismEctocarpus species9 EcSCA_722f female (Ectocarpus species9 EcSCA_722f female)
Sequence length511
Homology
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BLAST of mRNA_Ecto-sp9_F_contig958.17702.1 vs.
Match: Uncharacterized (protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YQG9_9STRA)

HSP 1 Score: 93.2 bits (230), Expect = 5.770e-17
Identity = 79/234 (33.76%), Postives = 98/234 (41.88%), Query Frame = 0 
Query:  279 ACREEGKRILDWAVKFFLQPRAILDLQRVWRGYRARKRLAAYLKWLEDRARRRREFQRYLDALAATRGAGGRNSEQVK----RRVWGREEFAHTGWRPRYDVG---NPPSMHDHIWAPPRGSTSGVRTFKVLLPPASERDRLTLTGDRNAWAGVPVGIA--KPRPPPERLGPPPRPGTITANTIATGGHHCRQQRSISP---SAREDVRDEGE-----VRMKYNWLPAPLVAKA 495
            AC  +   ++   V+  L+P A  D+QRV+RG+RAR RL                                           RR WGR  F HTGWRP+       +   +  H  APPR + +G+R   V LPP +E D   L GD   W GVPV  A  K +PPP  LGPPPRPGT  A                SP   + R +    GE        KY WLPA L+A A
Sbjct:  124 ACAAQVAALVRGGVQRALRPAAARDVQRVFRGHRARARLXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAGRRAWGRAAFVHTGWRPQRGAAAAWSAAELEAHAAAPPRATAAGLRVSCVTLPPRTEWDLKLLAGDGAVWVGVPVATAPRKCKPPP--LGPPPRPGTAGA---------------WSPPRLAGRGEAGGAGEGGGHQFVTKYTWLPASLLAGA 340
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp9_F_contig958.17702.1 vs.
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Ectocarpus species9 EcSCA_722f female vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
Uncharacterized5.770e-1733.76protein n=1 Tax=Tribonema minus TaxID=303371 RepID... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0 of Ectocarpus species9 EcSCA_722f female
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR000048IQ motif, EF-hand binding sitePROSITEPS50096IQcoord: 297..326
score: 8.7

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp9_F_contig958contigEcto-sp9_F_contig958:14185..20822 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Ectocarpus species9 EcSCA_722f female2022-09-29
Diamond blastp: OGS1.0 of Ectocarpus species9 EcSCA_722f female vs UniRef902022-09-16
OGS1.0 of Ectocarpus species9 EcSCA_722f female2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp9_F_contig958.17702.1mRNA_Ecto-sp9_F_contig958.17702.1Ectocarpus species9 EcSCA_722f femalemRNAEcto-sp9_F_contig958 14185..20822 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp9_F_contig958.17702.1 ID=prot_Ecto-sp9_F_contig958.17702.1|Name=mRNA_Ecto-sp9_F_contig958.17702.1|organism=Ectocarpus species9 EcSCA_722f female|type=polypeptide|length=511bp
MDKFARKTLRGVSLTFGTLADTLHFPDSMRCCGVGAIEAQIAACDDDDGS
TSDDSVFAIDRESRENNNRGQHSPPRKRKKDRDKTPVAKLPREGKKAGGH
RGMLSSARSLGWGRRRGGDKGVGDDQSQSSQRSGMSFLSGGLRVLSSAGK
NIFKSLGASSPLLDEGTLDASSDLTSLSLTETSYGEEGPRRSVRLWRHVR
MIVRGVRGVRRGVVEGSRLEDTVVFRAARRIQGIFRIKRARRVIARRRSI
ALEALKMGEQLRLQRRRREADARKRYKEACREEGKRILDWAVKFFLQPRA
ILDLQRVWRGYRARKRLAAYLKWLEDRARRRREFQRYLDALAATRGAGGR
NSEQVKRRVWGREEFAHTGWRPRYDVGNPPSMHDHIWAPPRGSTSGVRTF
KVLLPPASERDRLTLTGDRNAWAGVPVGIAKPRPPPERLGPPPRPGTITA
NTIATGGHHCRQQRSISPSAREDVRDEGEVRMKYNWLPAPLVAKAALLQC
PKSEESDPMA*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR000048IQ_motif_EF-hand-BS