mRNA_Ecto-sp9_F_contig958.17702.1 (mRNA) Ectocarpus species9 EcSCA_722f female
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Overview
Homology
BLAST of mRNA_Ecto-sp9_F_contig958.17702.1 vs.
Match: Uncharacterized (protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YQG9_9STRA) HSP 1 Score: 93.2 bits (230), Expect = 5.770e-17 Identity = 79/234 (33.76%), Postives = 98/234 (41.88%), Query Frame = 1
Query: 835 ACREEGKRILDWAVKFFLQPRAILDLQRVWRGYRARKRLAAYLKWLEDRARRRREFQRYLDALAATRGAGGRNSEQVK----RRVWGREEFAHTGWRPRYDVG---NPPSMHDHIWAPPRGSTSGVRTFKVLLPPASERDRLTLTGDRNAWAGVPVGIA--KPRPPPERLGPPPRPGTITANTIATGGHHCRQQRSISP---SAREDVRDEGE-----VRMKYNWLPAPLVAKA 1485
AC + ++ V+ L+P A D+QRV+RG+RAR RL RR WGR F HTGWRP+ + + H APPR + +G+R V LPP +E D L GD W GVPV A K +PPP LGPPPRPGT A SP + R + GE KY WLPA L+A A
Sbjct: 124 ACAAQVAALVRGGVQRALRPAAARDVQRVFRGHRARARLXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAGRRAWGRAAFVHTGWRPQRGAAAAWSAAELEAHAAAPPRATAAGLRVSCVTLPPRTEWDLKLLAGDGAVWVGVPVATAPRKCKPPP--LGPPPRPGTAGA---------------WSPPRLAGRGEAGGAGEGGGHQFVTKYTWLPASLLAGA 340 The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp9_F_contig958.17702.1 vs.
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Ectocarpus species9 EcSCA_722f female vs UniRef90) Total hits: 1
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_Ecto-sp9_F_contig958.17702.1 >prot_Ecto-sp9_F_contig958.17702.1 ID=prot_Ecto-sp9_F_contig958.17702.1|Name=mRNA_Ecto-sp9_F_contig958.17702.1|organism=Ectocarpus species9 EcSCA_722f female|type=polypeptide|length=511bp MDKFARKTLRGVSLTFGTLADTLHFPDSMRCCGVGAIEAQIAACDDDDGSback to top mRNA from alignment at Ecto-sp9_F_contig958:14185..20822+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_Ecto-sp9_F_contig958.17702.1 ID=mRNA_Ecto-sp9_F_contig958.17702.1|Name=mRNA_Ecto-sp9_F_contig958.17702.1|organism=Ectocarpus species9 EcSCA_722f female|type=mRNA|length=6638bp|location=Sequence derived from alignment at Ecto-sp9_F_contig958:14185..20822+ (Ectocarpus species9 EcSCA_722f female)back to top Coding sequence (CDS) from alignment at Ecto-sp9_F_contig958:14185..20822+ >mRNA_Ecto-sp9_F_contig958.17702.1 ID=mRNA_Ecto-sp9_F_contig958.17702.1|Name=mRNA_Ecto-sp9_F_contig958.17702.1|organism=Ectocarpus species9 EcSCA_722f female|type=CDS|length=3066bp|location=Sequence derived from alignment at Ecto-sp9_F_contig958:14185..20822+ (Ectocarpus species9 EcSCA_722f female)back to top |